BLASTX nr result

ID: Panax21_contig00019355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019355
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ86065.1| unknown [Medicago truncatula] gi|388494518|gb|AFK...   111   7e-23
gb|ACJ83847.1| unknown [Medicago truncatula]                          111   7e-23
emb|CBI18799.3| unnamed protein product [Vitis vinifera]              110   1e-22
ref|XP_002262663.1| PREDICTED: uncharacterized protein LOC100246...   110   1e-22
ref|XP_004144388.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-...   104   6e-21

>gb|ACJ86065.1| unknown [Medicago truncatula] gi|388494518|gb|AFK35325.1| unknown
           [Medicago truncatula]
          Length = 242

 Score =  111 bits (277), Expect = 7e-23
 Identities = 45/61 (73%), Positives = 56/61 (91%)
 Frame = -1

Query: 490 KEPTFTCPVCMGPLVEEMSTKCGHIFCKKCIRAAIATQSKCPTCRRKISMKNTIRVYLPT 311
           KEP FTCP+CMGP+VEEMST+CGHIFCK CI+AAI+ Q+KCPTCR+KI++K  IRV+LPT
Sbjct: 181 KEPVFTCPICMGPMVEEMSTRCGHIFCKSCIKAAISAQAKCPTCRKKITVKELIRVFLPT 240

Query: 310 S 308
           +
Sbjct: 241 T 241


>gb|ACJ83847.1| unknown [Medicago truncatula]
          Length = 247

 Score =  111 bits (277), Expect = 7e-23
 Identities = 45/61 (73%), Positives = 56/61 (91%)
 Frame = -1

Query: 490 KEPTFTCPVCMGPLVEEMSTKCGHIFCKKCIRAAIATQSKCPTCRRKISMKNTIRVYLPT 311
           KEP FTCP+CMGP+VEEMST+CGHIFCK CI+AAI+ Q+KCPTCR+KI++K  IRV+LPT
Sbjct: 186 KEPVFTCPICMGPMVEEMSTRCGHIFCKSCIKAAISAQAKCPTCRKKITVKELIRVFLPT 245

Query: 310 S 308
           +
Sbjct: 246 T 246


>emb|CBI18799.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  110 bits (275), Expect = 1e-22
 Identities = 44/62 (70%), Positives = 56/62 (90%)
 Frame = -1

Query: 490 KEPTFTCPVCMGPLVEEMSTKCGHIFCKKCIRAAIATQSKCPTCRRKISMKNTIRVYLPT 311
           KEPTF CP+CMG LV+EMSTKCGHIFCK CI+AAI+ Q KCPTCR++++MK+TIR+YLP 
Sbjct: 102 KEPTFNCPICMGQLVDEMSTKCGHIFCKMCIKAAISAQGKCPTCRKRVTMKDTIRIYLPA 161

Query: 310 SN 305
           ++
Sbjct: 162 AS 163


>ref|XP_002262663.1| PREDICTED: uncharacterized protein LOC100246586 [Vitis vinifera]
          Length = 209

 Score =  110 bits (275), Expect = 1e-22
 Identities = 44/62 (70%), Positives = 56/62 (90%)
 Frame = -1

Query: 490 KEPTFTCPVCMGPLVEEMSTKCGHIFCKKCIRAAIATQSKCPTCRRKISMKNTIRVYLPT 311
           KEPTF CP+CMG LV+EMSTKCGHIFCK CI+AAI+ Q KCPTCR++++MK+TIR+YLP 
Sbjct: 148 KEPTFNCPICMGQLVDEMSTKCGHIFCKMCIKAAISAQGKCPTCRKRVTMKDTIRIYLPA 207

Query: 310 SN 305
           ++
Sbjct: 208 AS 209


>ref|XP_004144388.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Cucumis sativus]
           gi|449523007|ref|XP_004168516.1| PREDICTED: E3
           ubiquitin-protein ligase RNF4-like [Cucumis sativus]
          Length = 206

 Score =  104 bits (260), Expect = 6e-21
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = -1

Query: 490 KEPTFTCPVCMGPLVEEMSTKCGHIFCKKCIRAAIATQSKCPTCRRKISMKNTIRVYLP 314
           KEP F+CP+CMGPLVEE ST+CGHIFCK CIRAAI  QSKCPTCR++++ K  IRV+LP
Sbjct: 143 KEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLP 201


Top