BLASTX nr result

ID: Panax21_contig00019349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019349
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containin...   362   4e-98
ref|XP_002512627.1| nucleic acid binding protein, putative [Rici...   352   2e-95
emb|CBI17647.3| unnamed protein product [Vitis vinifera]              352   4e-95
ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|2...   352   4e-95
ref|XP_002325901.1| predicted protein [Populus trichocarpa] gi|2...   345   4e-93

>ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
           isoform 1 [Vitis vinifera]
          Length = 441

 Score =  362 bits (928), Expect = 4e-98
 Identities = 167/198 (84%), Positives = 179/198 (90%)
 Frame = -2

Query: 595 QQSYPGGLTNWPLSRASFIPSSRWQSPSSYAPLILPQGVVSVQGWNAYNGQLGSITSAEQ 416
           QQSY GG+TNWPLSRASFIPS RWQ+PSSYAPL+LPQGVVSV GWNAY+GQLGS  S  Q
Sbjct: 191 QQSYAGGITNWPLSRASFIPSPRWQAPSSYAPLMLPQGVVSVPGWNAYSGQLGS-PSESQ 249

Query: 415 QQTTGNSQIYGTSRQSEATNEGSPGTYSSYRSGSIPVGYYALPRENVFPERPGQAECQFY 236
           QQT GN+QIYGTSRQSE  N GS GT+S YRSGS+P+G+YAL RENVFPERPGQ ECQFY
Sbjct: 250 QQTGGNNQIYGTSRQSEQPNTGSQGTFSPYRSGSVPIGFYALQRENVFPERPGQPECQFY 309

Query: 235 MKTGDCKFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKF 56
           MKTGDCKFGAVCR+HHPRERLIP PDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKF
Sbjct: 310 MKTGDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKF 369

Query: 55  DHPMGVFTYDLSAQYSAD 2
           DHPMG+F Y+LSA  SAD
Sbjct: 370 DHPMGIFAYNLSASSSAD 387



 Score =  102 bits (253), Expect = 8e-20
 Identities = 44/76 (57%), Positives = 54/76 (71%)
 Frame = -2

Query: 274 FPERPGQAECQFYMKTGDCKFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYS 95
           FPER GQ ECQ+Y+KTG CKFGA C++HHPR++   A    L+ +G PLRP E  C +Y 
Sbjct: 90  FPERMGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPDEIDCAYYL 149

Query: 94  RYGICKFGPSCKFDHP 47
           R G CKFG +CKF HP
Sbjct: 150 RTGQCKFGSTCKFHHP 165



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = -2

Query: 274 FPERPGQAECQFYMKTGDCKFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYS 95
           +PERPG+ +C +Y++TG C+FG  CR++HP  R +      +     P R G+P C +Y 
Sbjct: 45  YPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIATARMKG-EFPERMGQPECQYYL 103

Query: 94  RYGICKFGPSCKFDHP 47
           + G CKFG +CKF HP
Sbjct: 104 KTGTCKFGATCKFHHP 119


>ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223548588|gb|EEF50079.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 448

 Score =  352 bits (904), Expect = 2e-95
 Identities = 164/198 (82%), Positives = 178/198 (89%)
 Frame = -2

Query: 595 QQSYPGGLTNWPLSRASFIPSSRWQSPSSYAPLILPQGVVSVQGWNAYNGQLGSITSAEQ 416
           QQSY GG+TNW  SRASFI S RWQ+PSSY PLILPQGVVSV GWNAY+GQLGS++S E 
Sbjct: 200 QQSYTGGVTNW--SRASFITSPRWQAPSSYTPLILPQGVVSVPGWNAYSGQLGSVSSPEG 257

Query: 415 QQTTGNSQIYGTSRQSEATNEGSPGTYSSYRSGSIPVGYYALPRENVFPERPGQAECQFY 236
           QQ TGNSQIYGTSRQSE+ N GS GT S  R+GS+PVG+YAL R+NVFPERPGQ ECQFY
Sbjct: 258 QQQTGNSQIYGTSRQSESVNTGSQGTLSPLRAGSMPVGFYALQRDNVFPERPGQPECQFY 317

Query: 235 MKTGDCKFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKF 56
           MKTGDCKFGAVCR+HHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYG+CKFGPSCKF
Sbjct: 318 MKTGDCKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGVCKFGPSCKF 377

Query: 55  DHPMGVFTYDLSAQYSAD 2
           DHPMG+FTY+LSA  SAD
Sbjct: 378 DHPMGIFTYNLSAPSSAD 395



 Score =  101 bits (251), Expect = 1e-19
 Identities = 43/76 (56%), Positives = 54/76 (71%)
 Frame = -2

Query: 274 FPERPGQAECQFYMKTGDCKFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYS 95
           FPER GQ ECQ+Y+KTG CKFGA C++HHP+++   A    L+ +G PLRP E  C +Y 
Sbjct: 99  FPERIGQPECQYYLKTGTCKFGATCKFHHPKDKAGIAGRVSLNILGYPLRPNEIECAYYL 158

Query: 94  RYGICKFGPSCKFDHP 47
           R G CKFG +CKF HP
Sbjct: 159 RTGQCKFGSTCKFHHP 174



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = -2

Query: 274 FPERPGQAECQFYMKTGDCKFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYS 95
           +PE PG+ +C +Y++TG C+FGA CR++HP  R +      +     P R G+P C +Y 
Sbjct: 54  YPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKG-EFPERIGQPECQYYL 112

Query: 94  RYGICKFGPSCKFDHP 47
           + G CKFG +CKF HP
Sbjct: 113 KTGTCKFGATCKFHHP 128


>emb|CBI17647.3| unnamed protein product [Vitis vinifera]
          Length = 304

 Score =  352 bits (902), Expect = 4e-95
 Identities = 162/192 (84%), Positives = 174/192 (90%)
 Frame = -2

Query: 577 GLTNWPLSRASFIPSSRWQSPSSYAPLILPQGVVSVQGWNAYNGQLGSITSAEQQQTTGN 398
           G+TNWPLSRASFIPS RWQ+PSSYAPL+LPQGVVSV GWNAY+GQLGS  S  QQQT GN
Sbjct: 89  GITNWPLSRASFIPSPRWQAPSSYAPLMLPQGVVSVPGWNAYSGQLGS-PSESQQQTGGN 147

Query: 397 SQIYGTSRQSEATNEGSPGTYSSYRSGSIPVGYYALPRENVFPERPGQAECQFYMKTGDC 218
           +QIYGTSRQSE  N GS GT+S YRSGS+P+G+YAL RENVFPERPGQ ECQFYMKTGDC
Sbjct: 148 NQIYGTSRQSEQPNTGSQGTFSPYRSGSVPIGFYALQRENVFPERPGQPECQFYMKTGDC 207

Query: 217 KFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGV 38
           KFGAVCR+HHPRERLIP PDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMG+
Sbjct: 208 KFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGI 267

Query: 37  FTYDLSAQYSAD 2
           F Y+LSA  SAD
Sbjct: 268 FAYNLSASSSAD 279



 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = -2

Query: 241 FYMKTGDCKFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSC 62
           +Y+KTG CKFGA C++HHPR++   A    L+ +G PLRP E  C +Y R G CKFG +C
Sbjct: 14  YYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPDEIDCAYYLRTGQCKFGSTC 73

Query: 61  KFDHP 47
           KF HP
Sbjct: 74  KFHHP 78


>ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|222839206|gb|EEE77557.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  352 bits (902), Expect = 4e-95
 Identities = 166/199 (83%), Positives = 178/199 (89%), Gaps = 1/199 (0%)
 Frame = -2

Query: 595 QQSYPGGL-TNWPLSRASFIPSSRWQSPSSYAPLILPQGVVSVQGWNAYNGQLGSITSAE 419
           QQSYPGGL T W  SRASFI S RWQ+PSSY PLILPQGVVSV GWNAY+GQLGS++S E
Sbjct: 176 QQSYPGGLATTW--SRASFITSPRWQAPSSYTPLILPQGVVSVPGWNAYSGQLGSVSSPE 233

Query: 418 QQQTTGNSQIYGTSRQSEATNEGSPGTYSSYRSGSIPVGYYALPRENVFPERPGQAECQF 239
            QQ TGNSQIYGTSR SE+ N GS GT+S YRSGS P+G+YAL RE+VFPERPGQ ECQF
Sbjct: 234 SQQQTGNSQIYGTSRHSESVNAGSQGTFSPYRSGSAPLGFYALQRESVFPERPGQPECQF 293

Query: 238 YMKTGDCKFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCK 59
           YMKTGDCKFGAVCR+HHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCK
Sbjct: 294 YMKTGDCKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCK 353

Query: 58  FDHPMGVFTYDLSAQYSAD 2
           FDHPMGVFTY+L+A  SAD
Sbjct: 354 FDHPMGVFTYNLTASSSAD 372



 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 42/76 (55%), Positives = 54/76 (71%)
 Frame = -2

Query: 274 FPERPGQAECQFYMKTGDCKFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYS 95
           FPER GQ ECQ+Y+KTG CKFGA C++HHPR++   +    L+ +G PL+P E  C +Y 
Sbjct: 75  FPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGISGRVSLNILGYPLQPNEIECAYYL 134

Query: 94  RYGICKFGPSCKFDHP 47
           R G CKFG +CKF HP
Sbjct: 135 RTGQCKFGSTCKFHHP 150



 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 34/76 (44%), Positives = 49/76 (64%)
 Frame = -2

Query: 274 FPERPGQAECQFYMKTGDCKFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYS 95
           +PERPG+ +C +Y++TG C+FGA CR++HP  R +      +     P R G+P C +Y 
Sbjct: 30  YPERPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKG-EFPERIGQPECQYYL 88

Query: 94  RYGICKFGPSCKFDHP 47
           + G CKFG +CKF HP
Sbjct: 89  KTGTCKFGATCKFHHP 104


>ref|XP_002325901.1| predicted protein [Populus trichocarpa] gi|222862776|gb|EEF00283.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  345 bits (885), Expect = 4e-93
 Identities = 161/199 (80%), Positives = 178/199 (89%), Gaps = 1/199 (0%)
 Frame = -2

Query: 595 QQSYPGGL-TNWPLSRASFIPSSRWQSPSSYAPLILPQGVVSVQGWNAYNGQLGSITSAE 419
           QQSYPGGL TNW  SRASFI S RWQ+PS+Y PLILPQGVVSV GWNAY+GQ+GS++S E
Sbjct: 165 QQSYPGGLATNW--SRASFITSPRWQAPSNYTPLILPQGVVSVPGWNAYSGQVGSVSSPE 222

Query: 418 QQQTTGNSQIYGTSRQSEATNEGSPGTYSSYRSGSIPVGYYALPRENVFPERPGQAECQF 239
            QQ TGNSQIYGTSRQ+E+ N GS GT+S YRS S+P+G+YAL RE+VFPERPGQ ECQF
Sbjct: 223 SQQQTGNSQIYGTSRQNESVNAGSQGTFSPYRSDSVPMGFYALQRESVFPERPGQPECQF 282

Query: 238 YMKTGDCKFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCK 59
           YMKTGDCKFGAVCR+HHPRERLIPAPDCVLS IGLPLRPGEPLCIFYSRYGICKFGPSCK
Sbjct: 283 YMKTGDCKFGAVCRFHHPRERLIPAPDCVLSAIGLPLRPGEPLCIFYSRYGICKFGPSCK 342

Query: 58  FDHPMGVFTYDLSAQYSAD 2
           F HPMG+FTY+L+A  SAD
Sbjct: 343 FHHPMGIFTYNLTASSSAD 361



 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 42/76 (55%), Positives = 53/76 (69%)
 Frame = -2

Query: 274 FPERPGQAECQFYMKTGDCKFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYS 95
           FPER GQ ECQ+Y+KTG CKFGA C++HHPR++   +    L+ +G PLR  E  C +Y 
Sbjct: 64  FPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGVSGRVSLNILGYPLRLNEMECAYYL 123

Query: 94  RYGICKFGPSCKFDHP 47
           R G CKFG +CKF HP
Sbjct: 124 RTGQCKFGSTCKFHHP 139



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = -2

Query: 274 FPERPGQAECQFYMKTGDCKFGAVCRYHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYS 95
           +PERPG+ +C +Y++TG C+FG  CR++HP  R +      +     P R G+P C +Y 
Sbjct: 19  YPERPGEPDCSYYIRTGLCRFGPTCRFNHPPNRKLAIAAARMKG-EFPERIGQPECQYYL 77

Query: 94  RYGICKFGPSCKFDHP 47
           + G CKFG +CKF HP
Sbjct: 78  KTGTCKFGATCKFHHP 93


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