BLASTX nr result

ID: Panax21_contig00019348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019348
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264515.1| PREDICTED: mitochondrial import inner membra...   173   2e-41
ref|XP_003633330.1| PREDICTED: mitochondrial import inner membra...   170   1e-40
ref|XP_002298860.1| predicted protein [Populus trichocarpa] gi|2...   168   7e-40
ref|XP_002316775.1| predicted protein [Populus trichocarpa] gi|2...   162   5e-38
ref|XP_002522766.1| Import inner membrane translocase subunit TI...   161   8e-38

>ref|XP_002264515.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           TIM50 [Vitis vinifera] gi|296089900|emb|CBI39719.3|
           unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  173 bits (439), Expect = 2e-41
 Identities = 101/205 (49%), Positives = 124/205 (60%), Gaps = 14/205 (6%)
 Frame = -1

Query: 575 STIVRAQLFSSILKKNKNRWF--SVSANPP*ESTVSSSTILNNQXXXXXXXXXXXPLTNG 402
           ST +R++   S + KN NR F   VS++PP      +S    +Q            L +G
Sbjct: 2   STTIRSRGLCSFISKN-NRLFCSKVSSSPPKPPPSPASVAAVDQSPANQPIISSAALVDG 60

Query: 401 ------------AEKKPWNFLKXXXXXXXXXXXXXXXXXXXXXXLDEIDEKTKAFRASAN 258
                       + KK WNFLK                      LDE+DEKTKAFRASA 
Sbjct: 61  QNPPPIPPPAPPSAKKSWNFLKFGLIGALTVGVATAGYASYAYTLDEVDEKTKAFRASAK 120

Query: 257 YTIQDDASASDKFQALVHSATVTVPAKLLELYIDLRRSTEEQVRGFTEPSSNKLLPDLHP 78
            +++DDASA DKF+AL +++ VTVPAK ++LY+D+RR  EEQV GFTEP S+KLLPDLHP
Sbjct: 121 DSVEDDASAFDKFKALAYTSAVTVPAKAIDLYLDMRRLIEEQVHGFTEPLSDKLLPDLHP 180

Query: 77  MEQHVFTLVLDLNETLIYSDWKRDR 3
           MEQHV TLVLDLNETLIYSDWKRDR
Sbjct: 181 MEQHVLTLVLDLNETLIYSDWKRDR 205


>ref|XP_003633330.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           TIM50-like [Vitis vinifera] gi|296085020|emb|CBI28435.3|
           unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  170 bits (431), Expect = 1e-40
 Identities = 93/179 (51%), Positives = 116/179 (64%), Gaps = 9/179 (5%)
 Frame = -1

Query: 512 SVSANPP*ESTVSSST---------ILNNQXXXXXXXXXXXPLTNGAEKKPWNFLKXXXX 360
           ++SANPP E+ +SSS+         ++N+Q                A+K    FLK    
Sbjct: 24  NISANPPKEAIISSSSSSSSSSSESLINDQAPSAPPSEPV------AKKSSSAFLKFAIF 77

Query: 359 XXXXXXXXXXXXXXXXXXLDEIDEKTKAFRASANYTIQDDASASDKFQALVHSATVTVPA 180
                             LDE+DEKTKAFR SA YT+ D+AS+ DKFQAL++SA +TVPA
Sbjct: 78  GTLAGATAAAGYASYAYTLDEVDEKTKAFRTSAKYTVGDNASSLDKFQALLYSAAMTVPA 137

Query: 179 KLLELYIDLRRSTEEQVRGFTEPSSNKLLPDLHPMEQHVFTLVLDLNETLIYSDWKRDR 3
           K +ELY+DLRR  EEQ+RGF EPSS KLLPDLHP+EQH+FTLVLDLNETL+YSDWKR+R
Sbjct: 138 KAIELYLDLRRPIEEQIRGFAEPSSEKLLPDLHPLEQHIFTLVLDLNETLLYSDWKRER 196


>ref|XP_002298860.1| predicted protein [Populus trichocarpa] gi|222846118|gb|EEE83665.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  168 bits (425), Expect = 7e-40
 Identities = 93/192 (48%), Positives = 120/192 (62%), Gaps = 1/192 (0%)
 Frame = -1

Query: 575 STIVRAQLFSSILKKNK-NRWFSVSANPP*ESTVSSSTILNNQXXXXXXXXXXXPLTNGA 399
           ST++R+++ S   + NK NR F  S     EST+SS +I+++Q                +
Sbjct: 3   STMLRSRILSIASRTNKPNRRFFCSNK---ESTISSQSIISDQSAAAGEAPAQA--VGSS 57

Query: 398 EKKPWNFLKXXXXXXXXXXXXXXXXXXXXXXLDEIDEKTKAFRASANYTIQDDASASDKF 219
           E K WNF K                      LDE++EKTKA R S NYT  +DAS  +K+
Sbjct: 58  ENKAWNFFKYGIVGALTGATAFAGYASYAHSLDEVEEKTKALRESVNYTAANDASNVEKY 117

Query: 218 QALVHSATVTVPAKLLELYIDLRRSTEEQVRGFTEPSSNKLLPDLHPMEQHVFTLVLDLN 39
           Q L++S  +TVPAK +ELY+D+RR  EE V+GFTEP++ KLLPDLHP EQHVFTLVLDLN
Sbjct: 118 QGLLYSTAMTVPAKAVELYLDMRRLLEEHVKGFTEPAAEKLLPDLHPAEQHVFTLVLDLN 177

Query: 38  ETLIYSDWKRDR 3
           ET+IYSDWKRDR
Sbjct: 178 ETIIYSDWKRDR 189


>ref|XP_002316775.1| predicted protein [Populus trichocarpa] gi|222859840|gb|EEE97387.1|
           predicted protein [Populus trichocarpa]
          Length = 361

 Score =  162 bits (409), Expect = 5e-38
 Identities = 90/192 (46%), Positives = 116/192 (60%), Gaps = 1/192 (0%)
 Frame = -1

Query: 575 STIVRAQLFSSILKKNK-NRWFSVSANPP*ESTVSSSTILNNQXXXXXXXXXXXPLTNGA 399
           ST++R+++ S + + NK NR F  S   P    +SS + + +Q                 
Sbjct: 3   STVLRSRILSIVSRNNKPNRRFFCSNKEP---IISSQSTIPDQSAAAAEEAPAQA-AGIR 58

Query: 398 EKKPWNFLKXXXXXXXXXXXXXXXXXXXXXXLDEIDEKTKAFRASANYTIQDDASASDKF 219
           E K WNF K                      LDE++EKTK  R S NYT  +DAS  +K+
Sbjct: 59  ENKAWNFFKYGIIGALTGATAFAGYASYAYSLDEVEEKTKTLRESVNYTASNDASNVEKY 118

Query: 218 QALVHSATVTVPAKLLELYIDLRRSTEEQVRGFTEPSSNKLLPDLHPMEQHVFTLVLDLN 39
           Q L++S  +TVPAK +ELY+DLR+  EE V+GFTEP+S+KLLPDLHP EQHVFTLVLDLN
Sbjct: 119 QGLLYSTVMTVPAKAVELYLDLRKLLEEHVKGFTEPASDKLLPDLHPAEQHVFTLVLDLN 178

Query: 38  ETLIYSDWKRDR 3
           ET+IYSDWKRDR
Sbjct: 179 ETIIYSDWKRDR 190


>ref|XP_002522766.1| Import inner membrane translocase subunit TIM50-A, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223538004|gb|EEF39617.1| Import inner membrane
           translocase subunit TIM50-A, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 395

 Score =  161 bits (407), Expect = 8e-38
 Identities = 84/166 (50%), Positives = 110/166 (66%), Gaps = 4/166 (2%)
 Frame = -1

Query: 488 ESTVSSSTILNNQXXXXXXXXXXXPLTNGA----EKKPWNFLKXXXXXXXXXXXXXXXXX 321
           ES +SS +I+++Q            L   A    E+K W FLK                 
Sbjct: 66  ESIISSQSIISDQAADATSASATETLAAAAAAAEERKGWGFLKFAIIASLAGASGLAGYA 125

Query: 320 XXXXXLDEIDEKTKAFRASANYTIQDDASASDKFQALVHSATVTVPAKLLELYIDLRRST 141
                L+E++EKTKA R S NY   +DAS+++K++ L++SA +TVPAK ++LY+DLRR+ 
Sbjct: 126 TYAYTLNEVEEKTKALRESINYKTSEDASSAEKYKDLLYSAAMTVPAKAVQLYLDLRRNI 185

Query: 140 EEQVRGFTEPSSNKLLPDLHPMEQHVFTLVLDLNETLIYSDWKRDR 3
           EEQV+GFTEPSS+KLLPDLHP EQHVFTLVLDLNET+IYSDW+RDR
Sbjct: 186 EEQVKGFTEPSSDKLLPDLHPAEQHVFTLVLDLNETIIYSDWRRDR 231


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