BLASTX nr result

ID: Panax21_contig00019341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019341
         (1163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containin...   238   2e-60
ref|XP_002520668.1| nucleic acid binding protein, putative [Rici...   223   9e-56
ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containin...   222   1e-55
ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   221   3e-55
ref|NP_182306.2| zinc finger CCCH domain-containing protein 32 [...   214   3e-53

>ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1
           [Vitis vinifera] gi|296086618|emb|CBI32253.3| unnamed
           protein product [Vitis vinifera]
          Length = 475

 Score =  238 bits (607), Expect = 2e-60
 Identities = 109/152 (71%), Positives = 125/152 (82%), Gaps = 2/152 (1%)
 Frame = -1

Query: 452 MEVYGRS--RSGYHMDPPAEWAPAVPGTGLEESMRRLGLLGREFYPERVGVPDCAYYMRT 279
           ME+YGR+  R G   DP  EW+P    +GLEESM RLGL  RE YPER GV DC YYM+T
Sbjct: 1   MELYGRAPARDGSQSDPSVEWSPVRAVSGLEESMWRLGLSSRESYPERPGVADCVYYMKT 60

Query: 278 GSCGYGNKCRYNHPRDRSSVGGALRAAGGEYPERVGEPECQYYLRTGTCKFGASCKFHHP 99
           G CG+G++CRYNHPRDRSSV   LR+ GGEYPER+GEP CQ+YL+TGTCKFGASC+FHHP
Sbjct: 61  GFCGFGSRCRYNHPRDRSSVS-TLRSGGGEYPERIGEPACQFYLKTGTCKFGASCRFHHP 119

Query: 98  RNGGGSLSDVAVNIYGYPLRPGEKECSYYLKT 3
           RNGGGS+S V++NIYGYPLR GEKECSYYLKT
Sbjct: 120 RNGGGSMSHVSLNIYGYPLRLGEKECSYYLKT 151



 Score = 81.3 bits (199), Expect = 4e-13
 Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
 Frame = -1

Query: 332 EFYPERVGVPDCAYYMRTGSCGYGNKCRYNHPRD--RSSVGGALRAAGGEYPERVGEPEC 159
           + +PER G  +C YY+RTG C +G+ CRY+HPR+         L   G   P R G   C
Sbjct: 290 QVFPERPGQQECQYYLRTGDCKFGSSCRYHHPREWVVPKTNCVLSPLG--LPLRPGVQPC 347

Query: 158 QYYLRTGTCKFGASCKFHHPRNGGGSLSDVAVNIYGYPLRP 36
            +YL+ G CKFG++CKF HP  G    S  A ++   P+ P
Sbjct: 348 TFYLQNGYCKFGSTCKFDHPL-GNMRYSPSASSLTDMPVAP 387



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 32/61 (52%), Positives = 45/61 (73%)
 Frame = -1

Query: 188 YPERVGEPECQYYLRTGTCKFGASCKFHHPRNGGGSLSDVAVNIYGYPLRPGEKECSYYL 9
           +PER G+ ECQYYLRTG CKFG+SC++HHPR      ++  ++  G PLRPG + C++YL
Sbjct: 292 FPERPGQQECQYYLRTGDCKFGSSCRYHHPREWVVPKTNCVLSPLGLPLRPGVQPCTFYL 351

Query: 8   K 6
           +
Sbjct: 352 Q 352


>ref|XP_002520668.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540053|gb|EEF41630.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 478

 Score =  223 bits (567), Expect = 9e-56
 Identities = 105/155 (67%), Positives = 122/155 (78%), Gaps = 5/155 (3%)
 Frame = -1

Query: 452 MEVYGRS--RSGYHMDPPAEWAPAVPGTGLEESMRRLGLL---GREFYPERVGVPDCAYY 288
           M++YGRS  R+G       EW+     TGLEESM RLGL    G E YPER GVPDC YY
Sbjct: 1   MDLYGRSQARNGLQSGQQPEWSSGGAETGLEESMWRLGLNNSGGGESYPERPGVPDCVYY 60

Query: 287 MRTGSCGYGNKCRYNHPRDRSSVGGALRAAGGEYPERVGEPECQYYLRTGTCKFGASCKF 108
           MRTG CGYGN+CRYNHPR+R++V  A+RA G EYPER+GEP C++YL+TGTCKFGASCKF
Sbjct: 61  MRTGFCGYGNRCRYNHPRNRAAVEAAVRATG-EYPERIGEPSCEFYLKTGTCKFGASCKF 119

Query: 107 HHPRNGGGSLSDVAVNIYGYPLRPGEKECSYYLKT 3
           HHP++GGGSLS V +N +GYPLRPGE ECSYYLKT
Sbjct: 120 HHPKHGGGSLSHVPLNTHGYPLRPGENECSYYLKT 154



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 39/83 (46%), Positives = 50/83 (60%)
 Frame = -1

Query: 347 GLLGREFYPERVGVPDCAYYMRTGSCGYGNKCRYNHPRDRSSVGGALRAAGGEYPERVGE 168
           G    + +PER G P+C YY+RTG C +G+ CRY+HPRDR         +    P R G 
Sbjct: 292 GTQKEQTFPERPGEPECQYYLRTGDCKFGSSCRYHHPRDRVVPRTNCVLSPLGLPLRPGA 351

Query: 167 PECQYYLRTGTCKFGASCKFHHP 99
             C +YLR G CKFG++CKF HP
Sbjct: 352 QHCTFYLRNGHCKFGSTCKFDHP 374



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 34/61 (55%), Positives = 47/61 (77%)
 Frame = -1

Query: 188 YPERVGEPECQYYLRTGTCKFGASCKFHHPRNGGGSLSDVAVNIYGYPLRPGEKECSYYL 9
           +PER GEPECQYYLRTG CKFG+SC++HHPR+     ++  ++  G PLRPG + C++YL
Sbjct: 299 FPERPGEPECQYYLRTGDCKFGSSCRYHHPRDRVVPRTNCVLSPLGLPLRPGAQHCTFYL 358

Query: 8   K 6
           +
Sbjct: 359 R 359


>ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
           [Glycine max]
          Length = 471

 Score =  222 bits (566), Expect = 1e-55
 Identities = 104/152 (68%), Positives = 119/152 (78%), Gaps = 2/152 (1%)
 Frame = -1

Query: 452 MEVYGRS--RSGYHMDPPAEWAPAVPGTGLEESMRRLGLLGREFYPERVGVPDCAYYMRT 279
           M++YGRS  R+G +     EW+     T LEESM  L L G E YPER GVP+C YYMRT
Sbjct: 1   MDLYGRSPARNGPNPVNQPEWSSPGTDTALEESMWHLTLGGGESYPERSGVPNCVYYMRT 60

Query: 278 GSCGYGNKCRYNHPRDRSSVGGALRAAGGEYPERVGEPECQYYLRTGTCKFGASCKFHHP 99
           G CGYG +CRYNHPRDR++V  A+RA G +YPERVGEP CQYYL+TGTCKFGASCKFHHP
Sbjct: 61  GVCGYGGRCRYNHPRDRAAVAAAVRATG-DYPERVGEPPCQYYLKTGTCKFGASCKFHHP 119

Query: 98  RNGGGSLSDVAVNIYGYPLRPGEKECSYYLKT 3
           +NGGG LS   +N+YGYPLRPGEKECSYYLKT
Sbjct: 120 KNGGGYLSQAPLNVYGYPLRPGEKECSYYLKT 151



 Score = 90.5 bits (223), Expect = 7e-16
 Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
 Frame = -1

Query: 332 EFYPERVGVPDCAYYMRTGSCGYGNKCRYNHPRDRSSVGGALRAAGGEYPERVGEPECQY 153
           + YPER G P+C YY+RTG C +G  CRY+HPRD       L   G   P R G   C +
Sbjct: 291 QLYPERPGEPECQYYLRTGDCKFGLACRYHHPRDHIVARPLLSPVG--LPLRPGLQPCAF 348

Query: 152 YLRTGTCKFGASCKFHHPRN------GGGSLSDVAVNIY 54
           YL+ G CKFG++CKF HP           SL DV V  Y
Sbjct: 349 YLQNGHCKFGSTCKFDHPLGSMRYSPSASSLIDVPVTPY 387



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 34/61 (55%), Positives = 46/61 (75%)
 Frame = -1

Query: 188 YPERVGEPECQYYLRTGTCKFGASCKFHHPRNGGGSLSDVAVNIYGYPLRPGEKECSYYL 9
           YPER GEPECQYYLRTG CKFG +C++HHPR+    ++   ++  G PLRPG + C++YL
Sbjct: 293 YPERPGEPECQYYLRTGDCKFGLACRYHHPRD--HIVARPLLSPVGLPLRPGLQPCAFYL 350

Query: 8   K 6
           +
Sbjct: 351 Q 351


>ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 32-like [Glycine max]
          Length = 494

 Score =  221 bits (563), Expect = 3e-55
 Identities = 103/152 (67%), Positives = 119/152 (78%), Gaps = 2/152 (1%)
 Frame = -1

Query: 452 MEVYGR--SRSGYHMDPPAEWAPAVPGTGLEESMRRLGLLGREFYPERVGVPDCAYYMRT 279
           M++YGR  +R+G +     EW      TGLEESM  L L G E YPER GVP+C YYMRT
Sbjct: 1   MDLYGRGQARNGSNPVNQPEWRSPGTDTGLEESMWHLTLGGGESYPERPGVPNCVYYMRT 60

Query: 278 GSCGYGNKCRYNHPRDRSSVGGALRAAGGEYPERVGEPECQYYLRTGTCKFGASCKFHHP 99
           G CGYG++CRYNHPRDR++V  A+R  G +YPERVGEP CQYYL+TGTCKFGASCKFHHP
Sbjct: 61  GVCGYGSRCRYNHPRDRAAVAAAVRVTG-DYPERVGEPPCQYYLKTGTCKFGASCKFHHP 119

Query: 98  RNGGGSLSDVAVNIYGYPLRPGEKECSYYLKT 3
           +NGGG L+   +NIYGYPLRPGEKECSYYLKT
Sbjct: 120 KNGGGYLTQAPLNIYGYPLRPGEKECSYYLKT 151



 Score = 90.1 bits (222), Expect = 9e-16
 Identities = 39/78 (50%), Positives = 49/78 (62%)
 Frame = -1

Query: 332 EFYPERVGVPDCAYYMRTGSCGYGNKCRYNHPRDRSSVGGALRAAGGEYPERVGEPECQY 153
           +F+PER G P+C YY+RTG C +G  CRY+HPRD       L   G   P R G   C +
Sbjct: 291 QFFPERPGEPECQYYLRTGDCKFGLACRYHHPRDHIVARPLLSPVG--LPLRPGVQPCAF 348

Query: 152 YLRTGTCKFGASCKFHHP 99
           YL+ G CKFG++CKF HP
Sbjct: 349 YLQNGHCKFGSTCKFDHP 366



 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -1

Query: 188 YPERVGEPECQYYLRTGTCKFGASCKFHHPRNGGGSLSDVAVNIYGYPLRPGEKECSYYL 9
           +PER GEPECQYYLRTG CKFG +C++HHPR+    ++   ++  G PLRPG + C++YL
Sbjct: 293 FPERPGEPECQYYLRTGDCKFGLACRYHHPRD--HIVARPLLSPVGLPLRPGVQPCAFYL 350

Query: 8   K 6
           +
Sbjct: 351 Q 351


>ref|NP_182306.2| zinc finger CCCH domain-containing protein 32 [Arabidopsis
           thaliana] gi|145331439|ref|NP_001078078.1| zinc finger
           CCCH domain-containing protein 32 [Arabidopsis thaliana]
           gi|62901446|sp|Q84W91.2|C3H32_ARATH RecName: Full=Zinc
           finger CCCH domain-containing protein 32; Short=AtC3H32;
           AltName: Full=Zinc finger CCCH domain-containing protein
           ZFN-like 1 gi|134031914|gb|ABO45694.1| At2g47850
           [Arabidopsis thaliana] gi|330255803|gb|AEC10897.1| zinc
           finger CCCH domain-containing protein 32 [Arabidopsis
           thaliana] gi|330255805|gb|AEC10899.1| zinc finger CCCH
           domain-containing protein 32 [Arabidopsis thaliana]
          Length = 468

 Score =  214 bits (545), Expect = 3e-53
 Identities = 96/133 (72%), Positives = 110/133 (82%)
 Frame = -1

Query: 401 EWAPAVPGTGLEESMRRLGLLGREFYPERVGVPDCAYYMRTGSCGYGNKCRYNHPRDRSS 222
           +W PA   TGL+ESM RLGL G + YPER G PDCAYYMRTG CGYGN+CRYNHPRDR+S
Sbjct: 18  DWTPADADTGLQESMWRLGL-GSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRAS 76

Query: 221 VGGALRAAGGEYPERVGEPECQYYLRTGTCKFGASCKFHHPRNGGGSLSDVAVNIYGYPL 42
           V   +RA G +YPER GEP CQ+YL+TGTCKFGASCKFHHP+N GGS+S V +NIYGYP+
Sbjct: 77  VEATVRATG-QYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPV 135

Query: 41  RPGEKECSYYLKT 3
           R G+ ECSYYLKT
Sbjct: 136 REGDNECSYYLKT 148



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
 Frame = -1

Query: 392 PAVPGTGLEESMRRLGLLGREFYPERVGVPDCAYYMRTGSCGYGNKCRYNHPRDRSSVGG 213
           P++PG     S     +   + +PER G P+C YY++TG C +G  C+++HPRDR     
Sbjct: 264 PSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRA 323

Query: 212 ALRAAGGEYPERVGEPECQYYLRTGTCKFGASCKFHHPRN------GGGSLSDVAVNIY 54
               +    P R G   C +Y++ G CKFG++CKF HP           SL+D  V  Y
Sbjct: 324 NCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPY 382



 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 34/61 (55%), Positives = 46/61 (75%)
 Frame = -1

Query: 188 YPERVGEPECQYYLRTGTCKFGASCKFHHPRNGGGSLSDVAVNIYGYPLRPGEKECSYYL 9
           +PER GEPECQYYL+TG CKFG SCKFHHPR+     ++  ++  G PLRPG + C++Y+
Sbjct: 286 FPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYV 345

Query: 8   K 6
           +
Sbjct: 346 Q 346


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