BLASTX nr result

ID: Panax21_contig00019332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019332
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU24484.1| unknown [Glycine max]                                  315   5e-84
gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tu...   312   6e-83
ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycin...   312   6e-83
ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   311   1e-82
ref|XP_002519893.1| arginine/serine-rich splicing factor, putati...   311   1e-82

>gb|ACU24484.1| unknown [Glycine max]
          Length = 267

 Score =  315 bits (808), Expect = 5e-84
 Identities = 152/193 (78%), Positives = 160/193 (82%)
 Frame = -3

Query: 717 MSGRFSRTIYVGNLPLDIREYEVEDLFYKYGRILDIELKVPPRPPCYCFVEFENSRDAED 538
           MSGRFSRTIYVGNLP DIRE E+EDLFYKYGRI+DIELKVPPRPPCYCFVEF+N+RDAED
Sbjct: 1   MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60

Query: 537 AIRGRDGYDFDGCRLRVELAHGGRGPCXXXXXXXXXXXXXXXXXXXXXXXXXXSEFRVIV 358
           AIRGRDGY+FDGCRLRVELAHGGRGP                           SEFRVIV
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIV 120

Query: 357 RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRN 178
           RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNY+DMKYAIRKLDD EFRN
Sbjct: 121 RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDAEFRN 180

Query: 177 PWTRTYIRVNKFE 139
           PW R YIRV K+E
Sbjct: 181 PWARAYIRVRKYE 193


>gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
          Length = 269

 Score =  312 bits (799), Expect = 6e-83
 Identities = 152/194 (78%), Positives = 163/194 (84%), Gaps = 1/194 (0%)
 Frame = -3

Query: 717 MSGRFSRTIYVGNLPLDIREYEVEDLFYKYGRILDIELKVPPRPPCYCFVEFENSRDAED 538
           MSGRFSR+IYVGNLP DI+E EVEDLFYKYGRILDIELK+PPRPPCYCFVEFE+SRDAED
Sbjct: 1   MSGRFSRSIYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAED 60

Query: 537 AIRGRDGYDFDGCRLRVELAHGGRGP-CXXXXXXXXXXXXXXXXXXXXXXXXXXSEFRVI 361
           AIRGRDGY+FDGCRLRVELAHGGRGP                            S++RVI
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGPSSSSDRRGSYGSSGGGGGGGGRHGISRHSDYRVI 120

Query: 360 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFR 181
           +RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFR
Sbjct: 121 IRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFR 180

Query: 180 NPWTRTYIRVNKFE 139
           NPWTRTYIRV +++
Sbjct: 181 NPWTRTYIRVREYK 194


>ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
           gi|255636783|gb|ACU18725.1| unknown [Glycine max]
          Length = 267

 Score =  312 bits (799), Expect = 6e-83
 Identities = 151/193 (78%), Positives = 159/193 (82%)
 Frame = -3

Query: 717 MSGRFSRTIYVGNLPLDIREYEVEDLFYKYGRILDIELKVPPRPPCYCFVEFENSRDAED 538
           MSGRFSRTIYVGNLP DIRE E+EDLFYKYGRI+DIELKVPPRPPCYCFVEF+N+RDAED
Sbjct: 1   MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60

Query: 537 AIRGRDGYDFDGCRLRVELAHGGRGPCXXXXXXXXXXXXXXXXXXXXXXXXXXSEFRVIV 358
           AIRGRDGY+FDGCRLRVELAHGGRGP                           SEFRVIV
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIV 120

Query: 357 RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRN 178
           RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT G+VDYTNY+DMKYAIRKLDDTEFRN
Sbjct: 121 RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTLGIVDYTNYDDMKYAIRKLDDTEFRN 180

Query: 177 PWTRTYIRVNKFE 139
           PW   YIRV K+E
Sbjct: 181 PWAIAYIRVRKYE 193


>ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
          Length = 263

 Score =  311 bits (796), Expect = 1e-82
 Identities = 153/199 (76%), Positives = 161/199 (80%), Gaps = 6/199 (3%)
 Frame = -3

Query: 717 MSGRFSRTIYVGNLPLDIREYEVEDLFYKYGRILDIELKVPPRPPCYCFVEFENSRDAED 538
           MSGRFSRTIYVGNLP DIRE E+EDLFYKYGRI+DIELKVPPRPPCYCFVEF+N+RDAED
Sbjct: 1   MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60

Query: 537 AIRGRDGYDFDGCRLRVELAHGGRGPC------XXXXXXXXXXXXXXXXXXXXXXXXXXS 376
           AIRGRDGY+FDGCRLRVELAHGGRGP                                 S
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGGGGGSGAGGGRFGISRHS 120

Query: 375 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLD 196
           EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNY+DMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLD 180

Query: 195 DTEFRNPWTRTYIRVNKFE 139
           DTEFRNPW R YIRV K+E
Sbjct: 181 DTEFRNPWARAYIRVRKYE 199


>ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223540939|gb|EEF42497.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 264

 Score =  311 bits (796), Expect = 1e-82
 Identities = 153/194 (78%), Positives = 160/194 (82%), Gaps = 1/194 (0%)
 Frame = -3

Query: 717 MSGRFSRTIYVGNLPLDIREYEVEDLFYKYGRILDIELKVPPRPPCYCFVEFENSRDAED 538
           MSGRFSRTIYVGNLP DIRE+EVEDLFYKYGRILDIELK+PPRPPCYCFVEFEN+RDAED
Sbjct: 1   MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAED 60

Query: 537 AIRGRDGYDFDGCRLRVELAHGGRG-PCXXXXXXXXXXXXXXXXXXXXXXXXXXSEFRVI 361
           AIRGRDGY+FDGCRLRVELAHGGRG                             SEFRVI
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGSGGGGSGSGGRYCISRHSEFRVI 120

Query: 360 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFR 181
           VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS+GTFG+VDYTNYEDMKYAIRKLDDTEFR
Sbjct: 121 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYAIRKLDDTEFR 180

Query: 180 NPWTRTYIRVNKFE 139
           NPW R YIRV  +E
Sbjct: 181 NPWARAYIRVKMYE 194


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