BLASTX nr result

ID: Panax21_contig00019326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019326
         (1524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632308.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   581   e-163
ref|XP_002524762.1| WD-repeat protein, putative [Ricinus communi...   531   e-148
ref|XP_002307594.1| predicted protein [Populus trichocarpa] gi|2...   515   e-143
ref|NP_563675.1| transducin/WD-40 repeat-containing protein [Ara...   506   e-141
ref|XP_002889437.1| transducin family protein [Arabidopsis lyrat...   503   e-140

>ref|XP_003632308.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
            [Vitis vinifera] gi|296085216|emb|CBI28711.3| unnamed
            protein product [Vitis vinifera]
          Length = 433

 Score =  581 bits (1497), Expect = e-163
 Identities = 292/421 (69%), Positives = 342/421 (81%), Gaps = 5/421 (1%)
 Frame = -2

Query: 1517 MEESAMEEGDQNTEVEVAPALITVHPTQQSVAVAVGSDLRVFNLQEGCPFSLVDDSGGPL 1338
            MEE A+EEGD + +VEVAPALI+VHP  + + V++GSDLRVF+LQ GC  +LVDDS GPL
Sbjct: 1    MEEPAIEEGDNHRDVEVAPALISVHPDHKFIVVSIGSDLRVFDLQGGCSVTLVDDSSGPL 60

Query: 1337 HKDSIRAVRYGAKGKLFVSAGDDKLVKIWNTDSWKCIYTVLSEKRVSAVAISNEGQFVSF 1158
            HKDSIRA+R+GA+GKLFVSAGDDKLVKIWN +SW CI TV SEKRVSAVAIS +G FV F
Sbjct: 61   HKDSIRAIRFGAEGKLFVSAGDDKLVKIWNANSWHCISTVCSEKRVSAVAISKDGLFVCF 120

Query: 1157 ADKFGVVWVVELEGFHEKSAMIDKKAAPILAHYCSIITSLDFSPDGQFIVSADRDFKIRV 978
            ADKFGVVW + L+GF E   ++DKKAAP+LAHYCSIITSL+FS DG+FI+SADRDFKIRV
Sbjct: 121  ADKFGVVWALNLDGFDENQVLVDKKAAPVLAHYCSIITSLEFSLDGRFIISADRDFKIRV 180

Query: 977  TAFPKKPLDGAHEIQSFCLGHTEFVSCFTFVCSQEYPRGFLVSGGGDSTVRLWDFASGSL 798
            + FPKKPLDGAHEIQSFCLGHTEFVSC  FVC+ +YP GFLVSG GDSTVRLWD  SGSL
Sbjct: 181  SVFPKKPLDGAHEIQSFCLGHTEFVSCLAFVCAPDYPEGFLVSGSGDSTVRLWDITSGSL 240

Query: 797  LDTCEVGAKAGLLQSNGREEDIQPAITDLCASSDGLFVAVAIQSLPGIMLLSCDLSARTF 618
            LDTCEVG++AG L+SNGR E+   A+ DLC + DG  VA AIQSL GIMLL+C++SA++ 
Sbjct: 241  LDTCEVGSQAGFLESNGRGEEHYSAVIDLCTTPDGTLVAAAIQSLQGIMLLNCNISAKSL 300

Query: 617  SVARVISISGEAFIPXXXXXXXXXXXLWMVMGVSNLGGSDTASLARVRAISGF-----GS 453
            S+A+V+SI+G +FIP           LWMV GVS L G D+ SLARVR ISGF      S
Sbjct: 301  SIAKVVSITGGSFIPTSLGTASCAEFLWMVTGVSTLHGLDSHSLARVRVISGFRISSPDS 360

Query: 452  VEHHEASMLADSEIPGGEKLLQKLQGNLSIEEEMFSRAAEAVKTAMHNLLIKKQYSVEKR 273
            VE HE +ML D EIPGGEKLL+KLQG++SIE ++FS AAEAVK AM NLLIKKQYS +KR
Sbjct: 361  VE-HEPTMLEDDEIPGGEKLLEKLQGSVSIENKVFSAAAEAVKMAMCNLLIKKQYSADKR 419

Query: 272  E 270
            E
Sbjct: 420  E 420


>ref|XP_002524762.1| WD-repeat protein, putative [Ricinus communis]
            gi|223535946|gb|EEF37605.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 435

 Score =  531 bits (1367), Expect = e-148
 Identities = 273/422 (64%), Positives = 325/422 (77%), Gaps = 5/422 (1%)
 Frame = -2

Query: 1520 KMEESAMEEGDQNTEVEVAPALITVHPTQQSVAVAVGSDLRVFNLQEGCPFSLVDD-SGG 1344
            ++E++ +E  + N E+EVAPALI+VHPTQ SVAVAVGSDLRVF+LQ GC   LVD+ S  
Sbjct: 2    EIEDTQIEAAENNKEIEVAPALISVHPTQNSVAVAVGSDLRVFDLQGGCGVCLVDNNSSE 61

Query: 1343 PLHKDSIRAVRYGAKGKLFVSAGDDKLVKIWNTDSWKCIYTVLSEKRVSAVAISNEGQFV 1164
            PLHKDSIRA+RY A GKLFVSAGDDKLV IW+TDSW C+ +V SEKRVSAVAISN+G +V
Sbjct: 62   PLHKDSIRAIRYSANGKLFVSAGDDKLVNIWSTDSWGCVSSVCSEKRVSAVAISNDGLYV 121

Query: 1163 SFADKFGVVWVVELEGFHEKSAMIDKKAAPILAHYCSIITSLDFSPDGQFIVSADRDFKI 984
             FADKFGVVWVV+L       ++++KKA+P+LAHYCSIITSL+FSPDG+FIVSADRDFKI
Sbjct: 122  CFADKFGVVWVVDLHELEGNQSLVNKKASPLLAHYCSIITSLEFSPDGRFIVSADRDFKI 181

Query: 983  RVTAFPKKPLDGAHEIQSFCLGHTEFVSCFTFVCSQEYPRGFLVSGGGDSTVRLWDFASG 804
            RVT FPKK LDGAHEIQSFCLGHTEFVSC  F+ + +YP+G LVSG GDSTVRLWD  +G
Sbjct: 182  RVTVFPKKTLDGAHEIQSFCLGHTEFVSCLAFIWAADYPQGLLVSGSGDSTVRLWDITAG 241

Query: 803  SLLDTCEVGAKAGLLQSNGREEDIQPAITDLCASSDGLFVAVAIQSLPGIMLLSCDLSAR 624
             LLDTCEVGAK G L S+  +ED   A+TDLC   +   VAVAIQSL GIMLLSCDL ++
Sbjct: 242  RLLDTCEVGAKTGCLDSSKNDEDCS-AVTDLCTIPNDNLVAVAIQSLQGIMLLSCDLDSQ 300

Query: 623  TFSVARVISISGEAFIPXXXXXXXXXXXLWMVMGVSNLGGSDTASLARVRAISGF----G 456
            +  V +V+ + GE FIP           +WMV GVS L GSD  SLARVR +SGF     
Sbjct: 301  SLHVIKVVFVMGENFIPTSLGSSSSAELIWMVTGVSKLQGSDHNSLARVRVLSGFTKSIP 360

Query: 455  SVEHHEASMLADSEIPGGEKLLQKLQGNLSIEEEMFSRAAEAVKTAMHNLLIKKQYSVEK 276
                 E  +L D+E+PG EKLL+KLQG++ I+E++F  AAEAVKTAM NLLIKKQY+ EK
Sbjct: 361  DSTDGELHVLGDNEVPGAEKLLEKLQGSVFIDEKVFQAAAEAVKTAMCNLLIKKQYTTEK 420

Query: 275  RE 270
            RE
Sbjct: 421  RE 422


>ref|XP_002307594.1| predicted protein [Populus trichocarpa] gi|222857043|gb|EEE94590.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  515 bits (1327), Expect = e-143
 Identities = 268/427 (62%), Positives = 321/427 (75%), Gaps = 11/427 (2%)
 Frame = -2

Query: 1517 MEESAMEEGDQNTEVEVAPALITVHPTQQSVAVAVGSDLRVFNLQEGCPFSLVDDSGGPL 1338
            ME++  E G+ N +VEVAPALI+VHPTQ SVAVAVGSDLR F+L+  C  +LVD++G   
Sbjct: 1    MEDTQPEGGENNRDVEVAPALISVHPTQDSVAVAVGSDLRFFDLRGNCGVTLVDETGEAF 60

Query: 1337 HKDSIRAVRYGAKGKLFVSAGDDKLVKIWNTDSWKCIYTVLSEKRVSAVAISNEGQFVSF 1158
            HKDSIRA+RYGAKGKLFVSAGDDKLVK+W+TDSW+CI +V SEKRVSAVAISN+G +V F
Sbjct: 61   HKDSIRAIRYGAKGKLFVSAGDDKLVKVWSTDSWRCIASVCSEKRVSAVAISNDGLYVCF 120

Query: 1157 ADKFGVVWVVELEGFHEKSAMIDKKAAPILAHYCSIITSLDFSPDGQFIVSADRDFKIRV 978
            ADKFGVVWVV+L G      +++KKAAP+LAHYCSIITSL+FSPDG FIV+ADRDFKIRV
Sbjct: 121  ADKFGVVWVVDLRGLDGNETLVNKKAAPLLAHYCSIITSLEFSPDGWFIVTADRDFKIRV 180

Query: 977  TAFPKKPLDGAHEIQSFCLGHTEFVSCFTFVCSQEYPRGFLVSGGGDSTVRLWDFASGSL 798
            T FPKKPLDGAHEIQSFCLGHTEFVSC  F+ + +YP+GFLVSG GDSTVRLWD  SG+L
Sbjct: 181  TVFPKKPLDGAHEIQSFCLGHTEFVSCLAFLVTVDYPQGFLVSGSGDSTVRLWDINSGTL 240

Query: 797  LDTCEVGAKAG--LLQSNGREEDIQPAITDLCASSDGLFVAVAIQSLPG-----IMLLSC 639
            LDTCEVG+K     L      E     +TDLC      FVAVAIQ         I+L+SC
Sbjct: 241  LDTCEVGSKVSHFFLNYYDGSEVSCSTVTDLCTIPGSNFVAVAIQRHVSKHSACILLVSC 300

Query: 638  DLSARTFSVARVISISGEAFIPXXXXXXXXXXXLWMVMGVSNLGGSDTASLARVRAISGF 459
            DLS++TF   +V+S  G++FIP           LW + GVS L GSD  SLA VR +SGF
Sbjct: 301  DLSSQTFGAVKVVSNMGDSFIPTSLGCSSSAELLWTITGVSKLHGSDHNSLACVRVLSGF 360

Query: 458  ----GSVEHHEASMLADSEIPGGEKLLQKLQGNLSIEEEMFSRAAEAVKTAMHNLLIKKQ 291
                      E ++L D+E+PG EKLL+KLQG++++EEE+F  AAEAVKT+M NLLIKKQ
Sbjct: 361  KKTIPDAAGPELTLLDDNEVPGAEKLLEKLQGSVTVEEEVFLAAAEAVKTSMCNLLIKKQ 420

Query: 290  YSVEKRE 270
            Y+ EKRE
Sbjct: 421  YTTEKRE 427


>ref|NP_563675.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
            gi|13877931|gb|AAK44043.1|AF370228_1 unknown protein
            [Arabidopsis thaliana] gi|16323464|gb|AAL15226.1| unknown
            protein [Arabidopsis thaliana]
            gi|332189411|gb|AEE27532.1| transducin/WD-40
            repeat-containing protein [Arabidopsis thaliana]
          Length = 427

 Score =  506 bits (1303), Expect = e-141
 Identities = 255/415 (61%), Positives = 315/415 (75%)
 Frame = -2

Query: 1514 EESAMEEGDQNTEVEVAPALITVHPTQQSVAVAVGSDLRVFNLQEGCPFSLVDDSGGPLH 1335
            EES +EE +   ++EVAPALI+VHP+Q+SVAVAVGSDLR+F+L E CP SLVD+S GP+ 
Sbjct: 3    EESHIEEVEIQNKLEVAPALISVHPSQKSVAVAVGSDLRIFDLIENCPVSLVDESDGPIR 62

Query: 1334 KDSIRAVRYGAKGKLFVSAGDDKLVKIWNTDSWKCIYTVLSEKRVSAVAISNEGQFVSFA 1155
            K+SIRA+RY   GKLFVSAGDDKLVKIW+ DSW+C+ TV SEKRVSAVAIS++   V +A
Sbjct: 63   KESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKRVSAVAISSDDSHVCYA 122

Query: 1154 DKFGVVWVVELEGFHEKSAMIDKKAAPILAHYCSIITSLDFSPDGQFIVSADRDFKIRVT 975
            DKFGVVWV+EL+G ++   +  KK A +L+HYCSIITSL+FSPDG++I+SADRDFKIRVT
Sbjct: 123  DKFGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRVT 182

Query: 974  AFPKKPLDGAHEIQSFCLGHTEFVSCFTFVCSQEYPRGFLVSGGGDSTVRLWDFASGSLL 795
             FPKKPL+GAHEIQSFCLGH+EF++C  FV + E  +G+L+SG GDSTVRLWD  SGSLL
Sbjct: 183  VFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWDITSGSLL 242

Query: 794  DTCEVGAKAGLLQSNGREEDIQPAITDLCASSDGLFVAVAIQSLPGIMLLSCDLSARTFS 615
            DTCEV   AG  +SN  E   Q  +TD+CA  +    AVAIQS  GI LLSCDL+A T S
Sbjct: 243  DTCEVSTVAGHAESNENESPTQVTVTDICAIPNSSLAAVAIQSFQGIFLLSCDLTAHTLS 302

Query: 614  VARVISISGEAFIPXXXXXXXXXXXLWMVMGVSNLGGSDTASLARVRAISGFGSVEHHEA 435
            + +VI I GE+FIP           LWMV G SNL GS+    +RVR IS    +E   +
Sbjct: 303  ITKVIKIPGESFIPTSIAVSASSRLLWMVSGASNLPGSNHPGFSRVRVIS---CLETESS 359

Query: 434  SMLADSEIPGGEKLLQKLQGNLSIEEEMFSRAAEAVKTAMHNLLIKKQYSVEKRE 270
            S+L D +IPGG KLL++LQG ++IEE + S AAEAV+ AM +LL+KKQYS EKRE
Sbjct: 360  SILEDEQIPGGTKLLEQLQGKVTIEESVMSAAAEAVRAAMSSLLMKKQYSEEKRE 414


>ref|XP_002889437.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297335279|gb|EFH65696.1| transducin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 426

 Score =  503 bits (1296), Expect = e-140
 Identities = 259/415 (62%), Positives = 313/415 (75%)
 Frame = -2

Query: 1514 EESAMEEGDQNTEVEVAPALITVHPTQQSVAVAVGSDLRVFNLQEGCPFSLVDDSGGPLH 1335
            EES  EE +   ++EVAPALI+VHP+Q+S+AVAVGSDLRVFNL E  P SLVD+S GP  
Sbjct: 3    EESHTEEVEIQNKLEVAPALISVHPSQKSLAVAVGSDLRVFNLIENRPVSLVDESDGPSR 62

Query: 1334 KDSIRAVRYGAKGKLFVSAGDDKLVKIWNTDSWKCIYTVLSEKRVSAVAISNEGQFVSFA 1155
            K+SIRA+RY A GKLFVSAGDDKLVKIW+TDSW+C+ TV SEKRVSAVAIS++   V +A
Sbjct: 63   KESIRAIRYSASGKLFVSAGDDKLVKIWSTDSWRCLNTVCSEKRVSAVAISSDDSHVCYA 122

Query: 1154 DKFGVVWVVELEGFHEKSAMIDKKAAPILAHYCSIITSLDFSPDGQFIVSADRDFKIRVT 975
            DKFGVVWV+EL+G +E   +  KK A +L+HYCSIITSL+FSPDG++I+SADRDFKIRVT
Sbjct: 123  DKFGVVWVIELDGINEGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRVT 182

Query: 974  AFPKKPLDGAHEIQSFCLGHTEFVSCFTFVCSQEYPRGFLVSGGGDSTVRLWDFASGSLL 795
             FPKKPL+GAHEIQSFCLGH+EF++C  FV + E  +G+L+SG GDSTVRLWD  SGSLL
Sbjct: 183  VFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWDITSGSLL 242

Query: 794  DTCEVGAKAGLLQSNGREEDIQPAITDLCASSDGLFVAVAIQSLPGIMLLSCDLSARTFS 615
            DTCEV   AG L+SN  E   Q  +TD+CA  +    AVAIQS  GI LLSCDL+A T S
Sbjct: 243  DTCEVSTVAGHLESNESESPTQVTVTDICAIPNSSLAAVAIQSFQGIFLLSCDLTAHTLS 302

Query: 614  VARVISISGEAFIPXXXXXXXXXXXLWMVMGVSNLGGSDTASLARVRAISGFGSVEHHEA 435
            + +VI I GE+FIP           LWMV G SNL GS+    +RVR IS   +    E+
Sbjct: 303  IRKVIKIPGESFIPTSISVSASSRLLWMVSGASNLPGSNHPGFSRVRVISCLET----ES 358

Query: 434  SMLADSEIPGGEKLLQKLQGNLSIEEEMFSRAAEAVKTAMHNLLIKKQYSVEKRE 270
            S+L D  IPGG KLL++LQG + IEE + S AAEAV+ AM +LL+KKQYS EKRE
Sbjct: 359  SILEDEHIPGGTKLLEQLQGKVPIEESVMSAAAEAVRAAMSSLLMKKQYSEEKRE 413


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