BLASTX nr result

ID: Panax21_contig00019302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019302
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40586.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III s...   125   3e-27
ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III s...   111   7e-23
ref|XP_004141147.1| PREDICTED: DNA-directed RNA polymerase III s...   109   2e-22
ref|NP_001238101.1| uncharacterized protein LOC100527062 [Glycin...   108   6e-22

>emb|CBI40586.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  127 bits (320), Expect = 7e-28
 Identities = 55/69 (79%), Positives = 62/69 (89%)
 Frame = +2

Query: 287 QMEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDPVFSKD 466
           QMEFCPTCG  LQYELPHMGR ARF CPTCPYVC IE+KVKIKRKQ LVKK+I+P+FSKD
Sbjct: 64  QMEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFSKD 123

Query: 467 DLRNAPTTE 493
           D++N PTT+
Sbjct: 124 DMKNGPTTD 132


>ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Vitis vinifera]
          Length = 111

 Score =  125 bits (315), Expect = 3e-27
 Identities = 54/68 (79%), Positives = 61/68 (89%)
 Frame = +2

Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDPVFSKDD 469
           MEFCPTCG  LQYELPHMGR ARF CPTCPYVC IE+KVKIKRKQ LVKK+I+P+FSKDD
Sbjct: 1   MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFSKDD 60

Query: 470 LRNAPTTE 493
           ++N PTT+
Sbjct: 61  MKNGPTTD 68


>ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Glycine max]
          Length = 111

 Score =  111 bits (277), Expect = 7e-23
 Identities = 46/68 (67%), Positives = 60/68 (88%)
 Frame = +2

Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDPVFSKDD 469
           MEFCP+CG +LQYELP+MGR +RF C  CPYVC IE++V+IKRKQ LV+K+I+P+FS+DD
Sbjct: 1   MEFCPSCGNMLQYELPYMGRPSRFFCSACPYVCHIENRVEIKRKQRLVRKEIEPIFSEDD 60

Query: 470 LRNAPTTE 493
           + NAP+TE
Sbjct: 61  MTNAPSTE 68


>ref|XP_004141147.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Cucumis sativus]
          Length = 111

 Score =  109 bits (273), Expect = 2e-22
 Identities = 45/68 (66%), Positives = 60/68 (88%)
 Frame = +2

Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDPVFSKDD 469
           MEFCPTCG +LQ+ELP+MG+++RF CPTCPYV  +E++VKIKRKQHLVKK+++P+ S DD
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 60

Query: 470 LRNAPTTE 493
           ++NA  TE
Sbjct: 61  MKNAAQTE 68


>ref|NP_001238101.1| uncharacterized protein LOC100527062 [Glycine max]
           gi|255631470|gb|ACU16102.1| unknown [Glycine max]
          Length = 111

 Score =  108 bits (269), Expect = 6e-22
 Identities = 46/68 (67%), Positives = 58/68 (85%)
 Frame = +2

Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDPVFSKDD 469
           MEFCPTCG +LQYELP+MGR +RF C  CPYVC IE++V+IKRKQ LV K+I+P+FS+DD
Sbjct: 1   MEFCPTCGNMLQYELPYMGRPSRFFCSACPYVCLIENRVEIKRKQRLVSKEIEPIFSEDD 60

Query: 470 LRNAPTTE 493
           + NA +TE
Sbjct: 61  MTNAASTE 68


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