BLASTX nr result

ID: Panax21_contig00019288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019288
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598074.1| F-box/LRR-repeat protein [Medicago truncatul...    63   1e-07
ref|XP_003608306.1| F-box/LRR-repeat protein [Medicago truncatul...    62   2e-07
ref|XP_003606068.1| F-box/LRR-repeat protein [Medicago truncatul...    62   2e-07
ref|XP_002524684.1| hypothetical protein RCOM_1095870 [Ricinus c...    62   2e-07
ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatul...    61   4e-07

>ref|XP_003598074.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355487122|gb|AES68325.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 376

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 30/52 (57%), Positives = 34/52 (65%)
 Frame = +2

Query: 374 HILSFTNTKLAVQTCILSKRWQHIWATLPHLNLYKYNFGSCAKFSLFRTLIF 529
           H LSF N K AVQTCILSKRW ++W TLP L L   NF +C  F  F + IF
Sbjct: 29  HTLSFLNAKEAVQTCILSKRWINLWNTLPTLTLSSSNFRTCTSFDQFLSQIF 80


>ref|XP_003608306.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509361|gb|AES90503.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 600

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = +2

Query: 374 HILSFTNTKLAVQTCILSKRWQHIWATLPHLNLYKYNFGSCAKFSLF 514
           HILSF ++K AVQTC+LS RW+H+WA +P L L+  NF +  KF++F
Sbjct: 28  HILSFLDSKHAVQTCVLSTRWKHLWARIPTLILHSSNFSTVKKFAIF 74


>ref|XP_003606068.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355507123|gb|AES88265.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 861

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = +2

Query: 374 HILSFTNTKLAVQTCILSKRWQHIWATLPHLNLYKYNFGSCAKFSLF 514
           HILSF ++K AVQTC+LS RW+H+WA +P L L+  NF +  KF++F
Sbjct: 28  HILSFLDSKHAVQTCVLSTRWKHLWARIPTLILHSSNFSTVKKFAIF 74


>ref|XP_002524684.1| hypothetical protein RCOM_1095870 [Ricinus communis]
           gi|223536045|gb|EEF37703.1| hypothetical protein
           RCOM_1095870 [Ricinus communis]
          Length = 247

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
 Frame = -2

Query: 311 SCDRISGSGYNPN---PFYVNSFVEWNMRAPLEIIYKAYESKEYDRNDDVLIEKQEKAVL 141
           S D+   +G +PN   P +  SFVEWN+RAPLEIIY+AYE  E D ++DV   K E    
Sbjct: 92  SVDKWVETGLDPNQSKPDFEESFVEWNVRAPLEIIYEAYEG-EGDVDEDV---KNETRSG 147

Query: 140 DTERYPSLSLYYQD 99
             +RYPSLS+YY +
Sbjct: 148 RLQRYPSLSMYYPE 161


>ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509360|gb|AES90502.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 482

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = +2

Query: 374 HILSFTNTKLAVQTCILSKRWQHIWATLPHLNLYKYNFGSCAKFSLF 514
           HILSF NTK  V+TC+LSKRW+H+W  +P L LY   F +  +F++F
Sbjct: 47  HILSFLNTKHVVRTCVLSKRWRHLWKRIPTLMLYASRFSTVKQFAMF 93


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