BLASTX nr result

ID: Panax21_contig00019284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019284
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2...   198   4e-49
ref|XP_002308017.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-46
ref|XP_003554153.1| PREDICTED: DNA repair protein recA homolog 2...   189   2e-46
gb|AAF04410.1|AC010927_3 putative RecA protein [Arabidopsis thal...   187   8e-46
ref|NP_187625.2| DNA repair protein recA-like 2 [Arabidopsis tha...   187   8e-46

>ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
           [Vitis vinifera] gi|296087050|emb|CBI33377.3| unnamed
           protein product [Vitis vinifera]
          Length = 398

 Score =  198 bits (503), Expect = 4e-49
 Identities = 106/156 (67%), Positives = 122/156 (78%)
 Frame = +2

Query: 11  FGTSRLLSILSSCKLQNRRRDALARTEKGTCFFSSAAEALVFEADELRDEVETTEKDTAL 190
           F   R  S L S  LQ  +RDA+A     T   SS+ E L  E DE  ++V+  EKDTAL
Sbjct: 14  FNGFRGSSSLLSSSLQTGKRDAVACIGMHTRSLSSSVEFLEIECDEYGNDVKAAEKDTAL 73

Query: 191 RMALTQLAGDFSKESMLSLQRFFGARRTSVISTGSLKLDLALGVGGLPKGRIVEIFGQEA 370
           R+A+++LAGDF +ESMLSLQRFF +R   VISTGSLKLDLALG+GGLPKGRIVEI+GQEA
Sbjct: 74  RLAISRLAGDFGRESMLSLQRFFVSRHAPVISTGSLKLDLALGIGGLPKGRIVEIYGQEA 133

Query: 371 SGKTTLALHIIKEAQKLGGYCAYLDVENALDPSLAE 478
           SGKTTLALHIIKEAQKLGGYCAYLDVENA++PS AE
Sbjct: 134 SGKTTLALHIIKEAQKLGGYCAYLDVENAMNPSFAE 169


>ref|XP_002308017.1| predicted protein [Populus trichocarpa] gi|222853993|gb|EEE91540.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  190 bits (482), Expect = 1e-46
 Identities = 100/147 (68%), Positives = 117/147 (79%)
 Frame = +2

Query: 38  LSSCKLQNRRRDALARTEKGTCFFSSAAEALVFEADELRDEVETTEKDTALRMALTQLAG 217
           L +   QN RR A++   +     SS      FE DEL DE E  +KD ALR+ALTQLAG
Sbjct: 15  LCTLSQQNGRRHAVSFIGRNDHTLSSVVSD--FEPDELHDEGEAKQKDNALRLALTQLAG 72

Query: 218 DFSKESMLSLQRFFGARRTSVISTGSLKLDLALGVGGLPKGRIVEIFGQEASGKTTLALH 397
           +F +ESMLSLQRFF +RR S+ISTGSLKLDLALG+GGLPKGR+VEI+GQEASGKTT+ALH
Sbjct: 73  EFGRESMLSLQRFFSSRRASIISTGSLKLDLALGIGGLPKGRMVEIYGQEASGKTTIALH 132

Query: 398 IIKEAQKLGGYCAYLDVENALDPSLAE 478
           IIKEAQKLGGYCA+LDVENA+D SLA+
Sbjct: 133 IIKEAQKLGGYCAFLDVENAMDHSLAK 159


>ref|XP_003554153.1| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
           [Glycine max]
          Length = 386

 Score =  189 bits (480), Expect = 2e-46
 Identities = 98/141 (69%), Positives = 113/141 (80%)
 Frame = +2

Query: 56  QNRRRDALARTEKGTCFFSSAAEALVFEADELRDEVETTEKDTALRMALTQLAGDFSKES 235
           QN  R  ++R     C  SSAAEA  FE D + D+V+  EKD AL +A++QLA +FSKES
Sbjct: 20  QNGGRQIMSRIGMTACSLSSAAEASDFECDAIHDDVKAAEKDNALCLAVSQLASEFSKES 79

Query: 236 MLSLQRFFGARRTSVISTGSLKLDLALGVGGLPKGRIVEIFGQEASGKTTLALHIIKEAQ 415
           MLSLQ+ FG RR  VISTGSLKLDLALG+GGLPKGRIVEI+G+EA+GKTTLA+ IIKEAQ
Sbjct: 80  MLSLQKIFGVRRAHVISTGSLKLDLALGIGGLPKGRIVEIYGREAAGKTTLAIQIIKEAQ 139

Query: 416 KLGGYCAYLDVENALDPSLAE 478
           KLGGYCAYLDVENALD SL E
Sbjct: 140 KLGGYCAYLDVENALDFSLME 160


>gb|AAF04410.1|AC010927_3 putative RecA protein [Arabidopsis thaliana]
          Length = 389

 Score =  187 bits (475), Expect = 8e-46
 Identities = 101/152 (66%), Positives = 116/152 (76%)
 Frame = +2

Query: 23  RLLSILSSCKLQNRRRDALARTEKGTCFFSSAAEALVFEADELRDEVETTEKDTALRMAL 202
           R  S LS     N RR  LA +     + SS  EA   E DE+ D+ +  EKDTAL +AL
Sbjct: 14  RFFSYLSQL---NGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLAL 70

Query: 203 TQLAGDFSKESMLSLQRFFGARRTSVISTGSLKLDLALGVGGLPKGRIVEIFGQEASGKT 382
           +QL+GDF K+S LSLQRF+  RR SVISTGSL LDLALGVGGLPKGR+VE++G+EASGKT
Sbjct: 71  SQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKT 130

Query: 383 TLALHIIKEAQKLGGYCAYLDVENALDPSLAE 478
           TLALHIIKEAQKLGGYCAYLD ENA+DPSLAE
Sbjct: 131 TLALHIIKEAQKLGGYCAYLDAENAMDPSLAE 162


>ref|NP_187625.2| DNA repair protein recA-like 2 [Arabidopsis thaliana]
           gi|75158993|sp|Q8RY99.1|RECAM_ARATH RecName: Full=DNA
           repair protein recA homolog 2, mitochondrial; AltName:
           Full=Recombinase A homolog 2; Flags: Precursor
           gi|18996122|gb|AAL79768.1| RecA protein [Arabidopsis
           thaliana] gi|22531124|gb|AAM97066.1| putative RecA
           protein [Arabidopsis thaliana]
           gi|23198012|gb|AAN15533.1| putative RecA protein
           [Arabidopsis thaliana] gi|332641343|gb|AEE74864.1| DNA
           repair protein recA-like 2 [Arabidopsis thaliana]
          Length = 389

 Score =  187 bits (475), Expect = 8e-46
 Identities = 101/152 (66%), Positives = 116/152 (76%)
 Frame = +2

Query: 23  RLLSILSSCKLQNRRRDALARTEKGTCFFSSAAEALVFEADELRDEVETTEKDTALRMAL 202
           R  S LS     N RR  LA +     + SS  EA   E DE+ D+ +  EKDTAL +AL
Sbjct: 14  RFFSYLSQL---NGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLAL 70

Query: 203 TQLAGDFSKESMLSLQRFFGARRTSVISTGSLKLDLALGVGGLPKGRIVEIFGQEASGKT 382
           +QL+GDF K+S LSLQRF+  RR SVISTGSL LDLALGVGGLPKGR+VE++G+EASGKT
Sbjct: 71  SQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKT 130

Query: 383 TLALHIIKEAQKLGGYCAYLDVENALDPSLAE 478
           TLALHIIKEAQKLGGYCAYLD ENA+DPSLAE
Sbjct: 131 TLALHIIKEAQKLGGYCAYLDAENAMDPSLAE 162


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