BLASTX nr result

ID: Panax21_contig00019264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019264
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   202   2e-50
ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-49
emb|CBI35182.3| unnamed protein product [Vitis vinifera]              191   4e-47
ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [...   191   4e-47
ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g...   187   6e-46

>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 548

 Score =  202 bits (514), Expect = 2e-50
 Identities = 101/121 (83%), Positives = 112/121 (92%)
 Frame = +3

Query: 3   PQADMPPPLEKQPHQGISAYGREAPMISHTSSNTQVMPAVITQVTQQMQIPLSCADAVIG 182
           P AD+PPP+EKQPHQGISAYGREAPM  H SSN+Q  P++ITQ+TQQMQIPLS ADAVIG
Sbjct: 383 PPADLPPPMEKQPHQGISAYGREAPMGVHGSSNSQAAPSMITQITQQMQIPLSYADAVIG 442

Query: 183 TAGSNISYIRRASGSTVTIQETRGVPGEMTVEINGTASQVQTAQQLIQNFMAEAGAQSQT 362
           TAG++ISYIRRASG+TVTIQETRGVPGEMTVEI+GTASQVQTAQQLIQNFMAEAGA +Q 
Sbjct: 443 TAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAGAPTQA 502

Query: 363 Q 365
           Q
Sbjct: 503 Q 503


>ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|222857463|gb|EEE95010.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  199 bits (507), Expect = 1e-49
 Identities = 101/121 (83%), Positives = 110/121 (90%)
 Frame = +3

Query: 3   PQADMPPPLEKQPHQGISAYGREAPMISHTSSNTQVMPAVITQVTQQMQIPLSCADAVIG 182
           P ADMPP +EKQPHQGISAYGREAPM SH SSN Q  P++ITQ+TQQMQIPLS ADAVIG
Sbjct: 228 PPADMPPLMEKQPHQGISAYGREAPMGSHASSNAQAAPSMITQITQQMQIPLSYADAVIG 287

Query: 183 TAGSNISYIRRASGSTVTIQETRGVPGEMTVEINGTASQVQTAQQLIQNFMAEAGAQSQT 362
           TAG++ISYIRRASG+TVTIQETRGVPG MTVEI+GTASQVQTAQQLIQNFMAEAGA +Q 
Sbjct: 288 TAGASISYIRRASGATVTIQETRGVPGAMTVEISGTASQVQTAQQLIQNFMAEAGAPAQP 347

Query: 363 Q 365
           Q
Sbjct: 348 Q 348


>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  191 bits (486), Expect = 4e-47
 Identities = 96/121 (79%), Positives = 106/121 (87%)
 Frame = +3

Query: 3   PQADMPPPLEKQPHQGISAYGREAPMISHTSSNTQVMPAVITQVTQQMQIPLSCADAVIG 182
           P  ++PPP+EKQPHQGISAYGRE PM  H  S+ Q  P++ITQVTQQMQIPLS ADAVIG
Sbjct: 346 PPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIG 405

Query: 183 TAGSNISYIRRASGSTVTIQETRGVPGEMTVEINGTASQVQTAQQLIQNFMAEAGAQSQT 362
           TAG++ISYIRRASG+TVTIQETRGVPGEMTVEINGTASQVQ AQQLIQNFMAEA A +Q 
Sbjct: 406 TAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFMAEAAAPAQA 465

Query: 363 Q 365
           Q
Sbjct: 466 Q 466


>ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
          Length = 442

 Score =  191 bits (486), Expect = 4e-47
 Identities = 96/121 (79%), Positives = 106/121 (87%)
 Frame = +3

Query: 3   PQADMPPPLEKQPHQGISAYGREAPMISHTSSNTQVMPAVITQVTQQMQIPLSCADAVIG 182
           P  ++PPP+EKQPHQGISAYGRE PM  H  S+ Q  P++ITQVTQQMQIPLS ADAVIG
Sbjct: 277 PPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIG 336

Query: 183 TAGSNISYIRRASGSTVTIQETRGVPGEMTVEINGTASQVQTAQQLIQNFMAEAGAQSQT 362
           TAG++ISYIRRASG+TVTIQETRGVPGEMTVEINGTASQVQ AQQLIQNFMAEA A +Q 
Sbjct: 337 TAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFMAEAAAPAQA 396

Query: 363 Q 365
           Q
Sbjct: 397 Q 397


>ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 443

 Score =  187 bits (476), Expect = 6e-46
 Identities = 92/116 (79%), Positives = 106/116 (91%)
 Frame = +3

Query: 3   PQADMPPPLEKQPHQGISAYGREAPMISHTSSNTQVMPAVITQVTQQMQIPLSCADAVIG 182
           P A+MPPP+++QPHQGISAYGR+A +  H SSNTQ  P+++TQ+TQQMQIPLS ADAVIG
Sbjct: 276 PSAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQMQIPLSYADAVIG 335

Query: 183 TAGSNISYIRRASGSTVTIQETRGVPGEMTVEINGTASQVQTAQQLIQNFMAEAGA 350
           TAG++ISYIRRASG+TVTIQE RGVPGEMTVEI+GTASQVQTAQQLIQNFMAEA A
Sbjct: 336 TAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAA 391


Top