BLASTX nr result

ID: Panax21_contig00019249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019249
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267249.1| PREDICTED: probable ribulose-1,5 bisphosphat...   506   e-141
emb|CAN82664.1| hypothetical protein VITISV_015206 [Vitis vinifera]   492   e-136
ref|XP_002522479.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...   489   e-136
ref|XP_002892783.1| hypothetical protein ARALYDRAFT_471564 [Arab...   466   e-129
ref|XP_002311320.1| SET domain-containing protein [Populus trich...   462   e-128

>ref|XP_002267249.1| PREDICTED: probable ribulose-1,5 bisphosphate carboxylase/oxygenase
            large subunit N-methyltransferase, chloroplastic [Vitis
            vinifera] gi|296087793|emb|CBI35049.3| unnamed protein
            product [Vitis vinifera]
          Length = 484

 Score =  506 bits (1302), Expect = e-141
 Identities = 253/318 (79%), Positives = 282/318 (88%)
 Frame = +2

Query: 2    GTQLLSTTIGAKEYVQSEFLKVEEEIILPNRQLFPFSITVDDFLWAFGILRSRAFSHLRG 181
            GTQL +TT+G KEYVQSEFLKVEEE+ILP+ QLFPF +T+DDFLWAFGILRSRAFS LRG
Sbjct: 167  GTQLSNTTLGVKEYVQSEFLKVEEEVILPHSQLFPFPVTLDDFLWAFGILRSRAFSRLRG 226

Query: 182  QNLVLIPLADLINHSPSITTEDYSYEIKGAGXXXXXXXXXXXXPVSVKAGEQVLIQYDLN 361
            QNLVLIPLADLINHSPSITTE+Y++EIKGAG            PVSVKAGEQVLIQYDL+
Sbjct: 227  QNLVLIPLADLINHSPSITTEEYAWEIKGAGLFSRDQLFSLRTPVSVKAGEQVLIQYDLD 286

Query: 362  KSNAELALDYGFIESKSDRITYTLTLDISESDSFFGDKLDIAESNGMSTNAYFDITLDQP 541
            KSNAELALDYGFIES+ +R +YTLTL+ISESD FFGDKLDIAESNG+S  AYFDI L Q 
Sbjct: 287  KSNAELALDYGFIESRPNRNSYTLTLEISESDPFFGDKLDIAESNGLSEIAYFDIVLGQS 346

Query: 542  LPTVMLPYLRLVALGGTDAFLLESIFRNSIWEHLELPISRANEEVICQVVRNACKSAISG 721
            LP  MLPYLRLVALGG DAFLLESIFRN+IW HLELP+SRANEE+ICQV+++ACKSA+SG
Sbjct: 347  LPAAMLPYLRLVALGGPDAFLLESIFRNTIWGHLELPVSRANEELICQVIQDACKSALSG 406

Query: 722  YGTTIEEDEKLKEGGNLNPRLEIAVGIRTGEKKVLQHIDRIFKEREQELDEFEYYQERRL 901
            Y TTIEEDEKLKE GNL+PRLEIAVG+RTGEKKVLQ ID IF+ERE+ELD+ EYYQERRL
Sbjct: 407  YLTTIEEDEKLKEEGNLHPRLEIAVGVRTGEKKVLQQIDGIFRERERELDQLEYYQERRL 466

Query: 902  RDLGLVGEQGDIIFWEPK 955
            +DLGL GEQG+IIFWE K
Sbjct: 467  KDLGLCGEQGEIIFWESK 484


>emb|CAN82664.1| hypothetical protein VITISV_015206 [Vitis vinifera]
          Length = 507

 Score =  492 bits (1266), Expect = e-136
 Identities = 247/310 (79%), Positives = 275/310 (88%)
 Frame = +2

Query: 2    GTQLLSTTIGAKEYVQSEFLKVEEEIILPNRQLFPFSITVDDFLWAFGILRSRAFSHLRG 181
            GTQL +TT+G KEYVQSEFLKVEEE+ILP+ QLFPF +T+DDFLWAFGILRSRAFS LRG
Sbjct: 167  GTQLSNTTLGVKEYVQSEFLKVEEEVILPHSQLFPFPVTLDDFLWAFGILRSRAFSRLRG 226

Query: 182  QNLVLIPLADLINHSPSITTEDYSYEIKGAGXXXXXXXXXXXXPVSVKAGEQVLIQYDLN 361
            QNLVLIPLADLINHSPSITTE+Y++EIKGAG            PVSVKAGEQVLIQYDL+
Sbjct: 227  QNLVLIPLADLINHSPSITTEEYAWEIKGAGLFSRDQLFSLRTPVSVKAGEQVLIQYDLD 286

Query: 362  KSNAELALDYGFIESKSDRITYTLTLDISESDSFFGDKLDIAESNGMSTNAYFDITLDQP 541
            KSNAELALDYGFIES+ +R +YTLTL+ISESD FFGDKLDIAESNG+S  AYFDI L Q 
Sbjct: 287  KSNAELALDYGFIESRPNRNSYTLTLEISESDPFFGDKLDIAESNGLSEIAYFDIVLGQS 346

Query: 542  LPTVMLPYLRLVALGGTDAFLLESIFRNSIWEHLELPISRANEEVICQVVRNACKSAISG 721
            LP  MLPYLRLVALGG DAFLLESIFRN+IW HLELP+SRANEE+ICQV+++ACKSA+SG
Sbjct: 347  LPAAMLPYLRLVALGGPDAFLLESIFRNTIWGHLELPVSRANEELICQVIQDACKSALSG 406

Query: 722  YGTTIEEDEKLKEGGNLNPRLEIAVGIRTGEKKVLQHIDRIFKEREQELDEFEYYQERRL 901
            Y TTIEEDEKLKE GNL+PRLEIAVG+RTGEKKVLQ ID IF+ERE+ELD+ EYYQERRL
Sbjct: 407  YLTTIEEDEKLKEEGNLHPRLEIAVGVRTGEKKVLQQIDGIFRERERELDQLEYYQERRL 466

Query: 902  RDLGLVGEQG 931
            +DLGL GEQG
Sbjct: 467  KDLGLCGEQG 476


>ref|XP_002522479.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
            N-methyltransferase, chloroplast precursor, putative
            [Ricinus communis] gi|223538364|gb|EEF39971.1|
            Ribulose-1,5 bisphosphate carboxylase/oxygenase large
            subunit N-methyltransferase, chloroplast precursor,
            putative [Ricinus communis]
          Length = 502

 Score =  489 bits (1260), Expect = e-136
 Identities = 248/318 (77%), Positives = 271/318 (85%)
 Frame = +2

Query: 2    GTQLLSTTIGAKEYVQSEFLKVEEEIILPNRQLFPFSITVDDFLWAFGILRSRAFSHLRG 181
            GTQLL TT+G KEY+Q EF KVEEEI+LP+++LFP  IT+DDFLWAFGILRSRAFS LRG
Sbjct: 186  GTQLLRTTLGVKEYMQREFAKVEEEILLPHKELFPSPITLDDFLWAFGILRSRAFSRLRG 245

Query: 182  QNLVLIPLADLINHSPSITTEDYSYEIKGAGXXXXXXXXXXXXPVSVKAGEQVLIQYDLN 361
            QNLVLIPLADLINHSP ITTEDY+YEIKG G            P+SVK+GEQVLIQYDLN
Sbjct: 246  QNLVLIPLADLINHSPDITTEDYAYEIKGGGLFSRELLFSLRSPISVKSGEQVLIQYDLN 305

Query: 362  KSNAELALDYGFIESKSDRITYTLTLDISESDSFFGDKLDIAESNGMSTNAYFDITLDQP 541
            KSNAELALDYGFIE   DR TYTLTL ISESD FFGDKLDIAE+NG    A FDI L  P
Sbjct: 306  KSNAELALDYGFIEKTPDRNTYTLTLQISESDPFFGDKLDIAETNGSGETADFDIVLGNP 365

Query: 542  LPTVMLPYLRLVALGGTDAFLLESIFRNSIWEHLELPISRANEEVICQVVRNACKSAISG 721
            LP  MLPYLRLVALGGTDAFLLESIFRN+IW HLELPISRANEE+IC+VVR+ACKSA+SG
Sbjct: 366  LPPAMLPYLRLVALGGTDAFLLESIFRNTIWGHLELPISRANEELICRVVRDACKSALSG 425

Query: 722  YGTTIEEDEKLKEGGNLNPRLEIAVGIRTGEKKVLQHIDRIFKEREQELDEFEYYQERRL 901
            Y TTIEEDEKL E  +LNPRLEIAVGIR GEKKVLQ I+ +FK+RE ELDEFEYYQERRL
Sbjct: 426  YHTTIEEDEKL-EAADLNPRLEIAVGIRAGEKKVLQQINDVFKQRESELDEFEYYQERRL 484

Query: 902  RDLGLVGEQGDIIFWEPK 955
            ++LGLVGEQG+IIFWE K
Sbjct: 485  KELGLVGEQGEIIFWESK 502


>ref|XP_002892783.1| hypothetical protein ARALYDRAFT_471564 [Arabidopsis lyrata subsp.
            lyrata] gi|297338625|gb|EFH69042.1| hypothetical protein
            ARALYDRAFT_471564 [Arabidopsis lyrata subsp. lyrata]
          Length = 482

 Score =  466 bits (1200), Expect = e-129
 Identities = 232/318 (72%), Positives = 268/318 (84%)
 Frame = +2

Query: 2    GTQLLSTTIGAKEYVQSEFLKVEEEIILPNRQLFPFSITVDDFLWAFGILRSRAFSHLRG 181
            GTQLLSTT+G KEYV++EFLK+E+EI+LPN+ LF   IT+DDF+WAFGIL+SRAFS LRG
Sbjct: 165  GTQLLSTTLGVKEYVENEFLKLEQEILLPNKDLFSSRITLDDFIWAFGILKSRAFSRLRG 224

Query: 182  QNLVLIPLADLINHSPSITTEDYSYEIKGAGXXXXXXXXXXXXPVSVKAGEQVLIQYDLN 361
            QNLVLIPLADLINH+P+ITTEDY+YEIKGAG            PV VKAGEQV IQYDLN
Sbjct: 225  QNLVLIPLADLINHNPAITTEDYAYEIKGAGLFSRDLLFSLKSPVYVKAGEQVYIQYDLN 284

Query: 362  KSNAELALDYGFIESKSDRITYTLTLDISESDSFFGDKLDIAESNGMSTNAYFDITLDQP 541
            KSNAELALDYGF+ES  +R +YTLT++I ESD FFGDKLDIAE+N M    YFD+   Q 
Sbjct: 285  KSNAELALDYGFVESNPNRNSYTLTIEIPESDPFFGDKLDIAETNKMGETGYFDVVDGQT 344

Query: 542  LPTVMLPYLRLVALGGTDAFLLESIFRNSIWEHLELPISRANEEVICQVVRNACKSAISG 721
            LP  ML YLRLVALGG+DAFLLESIF N+IW HLELP+SR+NEE+IC+VVR+ACKSA+SG
Sbjct: 345  LPAGMLQYLRLVALGGSDAFLLESIFNNTIWGHLELPVSRSNEELICRVVRDACKSALSG 404

Query: 722  YGTTIEEDEKLKEGGNLNPRLEIAVGIRTGEKKVLQHIDRIFKEREQELDEFEYYQERRL 901
            + TTIEEDEKL E G L+PRLE+A+ IR GEK+VLQ ID+IFK+RE ELD  EYYQERRL
Sbjct: 405  FSTTIEEDEKLLEEGKLDPRLEMALKIRIGEKRVLQQIDQIFKDRELELDVLEYYQERRL 464

Query: 902  RDLGLVGEQGDIIFWEPK 955
            +DLGLVGEQGDIIFWE K
Sbjct: 465  KDLGLVGEQGDIIFWETK 482


>ref|XP_002311320.1| SET domain-containing protein [Populus trichocarpa]
            gi|222851140|gb|EEE88687.1| SET domain-containing protein
            [Populus trichocarpa]
          Length = 490

 Score =  462 bits (1190), Expect = e-128
 Identities = 237/326 (72%), Positives = 268/326 (82%), Gaps = 11/326 (3%)
 Frame = +2

Query: 2    GTQLLSTTIGAKEYVQSEFLKVEEEIILPNRQLFPFSITVDDFLWAFGILRSRAFSHLRG 181
            GTQLLSTT+G K Y++ EFLKVEEEI++P++QLFP  +T+DDF WAFGILRSR+FS LRG
Sbjct: 166  GTQLLSTTLGVKSYLRREFLKVEEEILVPHKQLFPSPVTLDDFSWAFGILRSRSFSRLRG 225

Query: 182  QNLVLIPLADL-----------INHSPSITTEDYSYEIKGAGXXXXXXXXXXXXPVSVKA 328
            QNLVLIPLADL           +NHSP IT ED  YEIKGAG            P+S+KA
Sbjct: 226  QNLVLIPLADLCNFLHTWLLDQVNHSPDITIEDGVYEIKGAGLFSRDLIFSLRSPISLKA 285

Query: 329  GEQVLIQYDLNKSNAELALDYGFIESKSDRITYTLTLDISESDSFFGDKLDIAESNGMST 508
            GEQVLIQY+LN SNAELA+DYGFIE+KSDR  YTLTL ISESD FFGDKLDIAE+NG+  
Sbjct: 286  GEQVLIQYNLNLSNAELAVDYGFIEAKSDRNMYTLTLQISESDPFFGDKLDIAETNGLGE 345

Query: 509  NAYFDITLDQPLPTVMLPYLRLVALGGTDAFLLESIFRNSIWEHLELPISRANEEVICQV 688
             A FDI L  PLP  +LPYLRLVALGGTD+FLLESIFRN+IW HLELP+SRANEE+IC+V
Sbjct: 346  IADFDIVLGNPLPPTLLPYLRLVALGGTDSFLLESIFRNTIWGHLELPVSRANEELICRV 405

Query: 689  VRNACKSAISGYGTTIEEDEKLKEGGNLNPRLEIAVGIRTGEKKVLQHIDRIFKEREQEL 868
            VR+ACKSA+SGY TTIEEDEKLK G  LNPRLEIAVGIR GEKKVLQ I+ IFK+R+ EL
Sbjct: 406  VRDACKSALSGYHTTIEEDEKLK-GEELNPRLEIAVGIRAGEKKVLQQIEEIFKQRQSEL 464

Query: 869  DEFEYYQERRLRDLGLVGEQGDIIFW 946
            DE EYYQERRL+DLGLVGEQG+IIFW
Sbjct: 465  DELEYYQERRLKDLGLVGEQGEIIFW 490


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