BLASTX nr result

ID: Panax21_contig00019240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019240
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318161.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_002321741.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
ref|XP_002872067.1| polynucleotide adenylyltransferase family pr...   177   1e-42
ref|XP_002511109.1| poly(A) polymerase, putative [Ricinus commun...   177   1e-42
ref|XP_002266814.1| PREDICTED: CCA-adding enzyme [Vitis vinifera...   175   4e-42

>ref|XP_002318161.1| predicted protein [Populus trichocarpa] gi|222858834|gb|EEE96381.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score =  179 bits (453), Expect = 3e-43
 Identities = 87/129 (67%), Positives = 106/129 (82%)
 Frame = -1

Query: 392 LFSNMDKFLAPDMPCHSSLWVAILAFHKALSDQPRNPFVVAAFGLAVHNGGDMLEALNIA 213
           LFSN+DK LAPD PCHSSLWV ILAFHKAL+DQPR+P VVAAF LAVHNGGD+L  +N+A
Sbjct: 329 LFSNLDKLLAPDRPCHSSLWVGILAFHKALADQPRDPMVVAAFCLAVHNGGDILGGVNMA 388

Query: 212 RRISRPHDISFYELLEPHNLGSEALKDEVMHLYASVRSTLSNMTDEFHVSQAMARYPKAP 33
           R+I++PHDISF+EL +P +L S+ L DEV+   ASV+  L+ MTDE++VS AMA YP+AP
Sbjct: 389 RKITKPHDISFHELTKPQDLDSKMLIDEVVDFAASVKQVLNWMTDEYYVSLAMAEYPQAP 448

Query: 32  KSALVFIPL 6
            S LVF PL
Sbjct: 449 YSDLVFFPL 457


>ref|XP_002321741.1| predicted protein [Populus trichocarpa] gi|222868737|gb|EEF05868.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/129 (67%), Positives = 103/129 (79%)
 Frame = -1

Query: 392 LFSNMDKFLAPDMPCHSSLWVAILAFHKALSDQPRNPFVVAAFGLAVHNGGDMLEALNIA 213
           LFSN+DK LAPD PCH+SLWV ILAFHKALSDQPR+P VVAAF LAVHNGGD+L  + + 
Sbjct: 293 LFSNLDKHLAPDRPCHNSLWVGILAFHKALSDQPRDPMVVAAFCLAVHNGGDILGGVKMV 352

Query: 212 RRISRPHDISFYELLEPHNLGSEALKDEVMHLYASVRSTLSNMTDEFHVSQAMARYPKAP 33
           ++ ++PHD+SF+EL EP NL SEAL DEV+   ASV+  L  MTDE+ VSQAMA YP+AP
Sbjct: 353 KKFTKPHDVSFHELSEPQNLNSEALVDEVVDFAASVKQVLYWMTDEYCVSQAMAEYPQAP 412

Query: 32  KSALVFIPL 6
            S LVF PL
Sbjct: 413 CSDLVFFPL 421


>ref|XP_002872067.1| polynucleotide adenylyltransferase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297317904|gb|EFH48326.1|
           polynucleotide adenylyltransferase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 533

 Score =  177 bits (448), Expect = 1e-42
 Identities = 85/131 (64%), Positives = 108/131 (82%), Gaps = 1/131 (0%)
 Frame = -1

Query: 392 LFSNMDKFLAPDMPCHSSLWVAILAFHKALSDQPRNPFVVAAFGLAVHNGGDMLEALNIA 213
           LF+N+DK LAPD PCHSSLW+AILAFHKAL+DQPR+P VVAAF LAVHN GD+LEA+ I 
Sbjct: 338 LFANLDKLLAPDRPCHSSLWIAILAFHKALADQPRSPLVVAAFSLAVHNCGDILEAVKIT 397

Query: 212 RRISRPHDISFYELLEP-HNLGSEALKDEVMHLYASVRSTLSNMTDEFHVSQAMARYPKA 36
           ++I+RPHD SF+EL+EP  NL  + L DEVM L AS++  L+ MTD +++S+AM+ YP+A
Sbjct: 398 KKIARPHDKSFFELVEPEENLDFQTLLDEVMDLDASIKDALNQMTDGYYISKAMSAYPQA 457

Query: 35  PKSALVFIPLE 3
           P S LVFIPL+
Sbjct: 458 PYSDLVFIPLQ 468


>ref|XP_002511109.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223550224|gb|EEF51711.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 524

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/127 (67%), Positives = 103/127 (81%)
 Frame = -1

Query: 392 LFSNMDKFLAPDMPCHSSLWVAILAFHKALSDQPRNPFVVAAFGLAVHNGGDMLEALNIA 213
           L SNMDK LAPD PCHS LW+ ILAFHKALS+QPR+P VVAAF LAVHNGGDM EA+NIA
Sbjct: 336 LLSNMDKLLAPDRPCHSCLWIGILAFHKALSEQPRDPLVVAAFCLAVHNGGDMSEAVNIA 395

Query: 212 RRISRPHDISFYELLEPHNLGSEALKDEVMHLYASVRSTLSNMTDEFHVSQAMARYPKAP 33
           +RI +PHD+SF+EL +P ++ ++ L DEVM L  S++  LS MTDE +VSQAMA YP+AP
Sbjct: 396 KRIDKPHDMSFHELCKPGDMDTDQLVDEVMDLAQSIKRVLSMMTDEHYVSQAMAEYPQAP 455

Query: 32  KSALVFI 12
            S LVFI
Sbjct: 456 YSDLVFI 462


>ref|XP_002266814.1| PREDICTED: CCA-adding enzyme [Vitis vinifera]
           gi|296088167|emb|CBI35659.3| unnamed protein product
           [Vitis vinifera]
          Length = 537

 Score =  175 bits (443), Expect = 4e-42
 Identities = 88/130 (67%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
 Frame = -1

Query: 392 LFSNMDKFLAPDMPCHSSLWVAILAFHKALSDQPRNPFVVAAFGLAVHNGGDMLEALNIA 213
           LFSN+D+ +APD PCH+SLW+ +LAFHKAL DQPR+P VVAAF LAVHNGG + EA+ IA
Sbjct: 338 LFSNLDRLVAPDRPCHNSLWIGMLAFHKALVDQPRHPMVVAAFSLAVHNGGSLSEAVEIA 397

Query: 212 RRISRPHDISFYELLEPHNLGS-EALKDEVMHLYASVRSTLSNMTDEFHVSQAMARYPKA 36
           RRIS+PHD SF ELLEP +L S E+L DE+M L ASV+S L  MTDE  VSQAM++YP+A
Sbjct: 398 RRISQPHDQSFSELLEPQDLDSDESLIDEIMDLAASVKSALMKMTDEHFVSQAMSKYPRA 457

Query: 35  PKSALVFIPL 6
           P S LVFI L
Sbjct: 458 PYSDLVFISL 467


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