BLASTX nr result

ID: Panax21_contig00019232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019232
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278706.1| PREDICTED: ribonuclease 3-like protein 2-lik...   252   2e-65
emb|CBI26675.3| unnamed protein product [Vitis vinifera]              252   2e-65
ref|XP_002317324.1| predicted protein [Populus trichocarpa] gi|2...   248   5e-64
ref|XP_002529460.1| ribonuclease III, putative [Ricinus communis...   242   2e-62
ref|XP_004147555.1| PREDICTED: ribonuclease 3-like protein 2-lik...   220   1e-55

>ref|XP_002278706.1| PREDICTED: ribonuclease 3-like protein 2-like [Vitis vinifera]
          Length = 364

 Score =  252 bits (644), Expect = 2e-65
 Identities = 124/167 (74%), Positives = 144/167 (86%)
 Frame = +1

Query: 1   THSSYTDSESYQRLEFVGDAALGLAVTNFVFLTYPELDPGELSLIRAANISTEKLARVAV 180
           THSSYTDS SYQRLEF+GDAALG A++N+VFL YP LDPG+LSLIRAANISTEKLARVAV
Sbjct: 54  THSSYTDSASYQRLEFIGDAALGCALSNYVFLAYPSLDPGQLSLIRAANISTEKLARVAV 113

Query: 181 RHGLYKYVRHNATALNEKVREFCAVVEQEDDTVVYGGAMKAPKVLADIVESIAAAVYVDL 360
           R GLY+YVRHNA AL++KVREF   V++E D+V+YGG++KAPK LADIVES+AAA+YVD 
Sbjct: 114 RVGLYQYVRHNAAALDDKVREFALAVQEEGDSVLYGGSVKAPKFLADIVESVAAAIYVDC 173

Query: 361 RFDLHALWKIIITLLEPMVLLDKLQQQPQPVTLLFEVCQKDGKQVDI 501
            FDL  LW I   LLEP+V  + LQQQPQPVTLL+E+CQKDGK VDI
Sbjct: 174 NFDLQVLWVIFRGLLEPIVTHEALQQQPQPVTLLYELCQKDGKHVDI 220


>emb|CBI26675.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  252 bits (644), Expect = 2e-65
 Identities = 124/167 (74%), Positives = 144/167 (86%)
 Frame = +1

Query: 1   THSSYTDSESYQRLEFVGDAALGLAVTNFVFLTYPELDPGELSLIRAANISTEKLARVAV 180
           THSSYTDS SYQRLEF+GDAALG A++N+VFL YP LDPG+LSLIRAANISTEKLARVAV
Sbjct: 27  THSSYTDSASYQRLEFIGDAALGCALSNYVFLAYPSLDPGQLSLIRAANISTEKLARVAV 86

Query: 181 RHGLYKYVRHNATALNEKVREFCAVVEQEDDTVVYGGAMKAPKVLADIVESIAAAVYVDL 360
           R GLY+YVRHNA AL++KVREF   V++E D+V+YGG++KAPK LADIVES+AAA+YVD 
Sbjct: 87  RVGLYQYVRHNAAALDDKVREFALAVQEEGDSVLYGGSVKAPKFLADIVESVAAAIYVDC 146

Query: 361 RFDLHALWKIIITLLEPMVLLDKLQQQPQPVTLLFEVCQKDGKQVDI 501
            FDL  LW I   LLEP+V  + LQQQPQPVTLL+E+CQKDGK VDI
Sbjct: 147 NFDLQVLWVIFRGLLEPIVTHEALQQQPQPVTLLYELCQKDGKHVDI 193


>ref|XP_002317324.1| predicted protein [Populus trichocarpa] gi|222860389|gb|EEE97936.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  248 bits (632), Expect = 5e-64
 Identities = 120/169 (71%), Positives = 146/169 (86%), Gaps = 2/169 (1%)
 Frame = +1

Query: 1   THSSYTDSESYQRLEFVGDAALGLAVTNFVFLTYPELDPGELSLIRAANISTEKLARVAV 180
           THSSYTDS SYQR+EF+GDAALGLA++N+V+L YP+LDPG LSL+RAANISTEKLARVA+
Sbjct: 27  THSSYTDSASYQRMEFLGDAALGLALSNYVYLAYPQLDPGHLSLLRAANISTEKLARVAI 86

Query: 181 RHGLYKYVRHNATALNEKVREFCAVV--EQEDDTVVYGGAMKAPKVLADIVESIAAAVYV 354
           +HGLY++VRHNATAL++KV+EF   V  E +DD +VYGG++KAPK+LADIVES+AAAVYV
Sbjct: 87  KHGLYRFVRHNATALDDKVKEFSDAVSGEDDDDALVYGGSIKAPKILADIVESVAAAVYV 146

Query: 355 DLRFDLHALWKIIITLLEPMVLLDKLQQQPQPVTLLFEVCQKDGKQVDI 501
           D+ FDL   W I   +LEP+V L+ LQQQPQPVT+LFE CQK GK VDI
Sbjct: 147 DVDFDLQTFWVIFRGILEPIVTLEDLQQQPQPVTMLFERCQKQGKNVDI 195


>ref|XP_002529460.1| ribonuclease III, putative [Ricinus communis]
           gi|223531076|gb|EEF32926.1| ribonuclease III, putative
           [Ricinus communis]
          Length = 342

 Score =  242 bits (618), Expect = 2e-62
 Identities = 119/168 (70%), Positives = 146/168 (86%), Gaps = 1/168 (0%)
 Frame = +1

Query: 1   THSSYTDSESYQRLEFVGDAALGLAVTNFVFLTYPELDPGELSLIRAANISTEKLARVAV 180
           THSSYT S +YQRLEF+GDAALGLA++N VFL YP+LDPG LSL+RAANISTEKLARVAV
Sbjct: 29  THSSYTASPNYQRLEFIGDAALGLALSNHVFLAYPDLDPGHLSLLRAANISTEKLARVAV 88

Query: 181 RHGLYKYVRHNATALNEKVREFC-AVVEQEDDTVVYGGAMKAPKVLADIVESIAAAVYVD 357
           +HGL++++RHNATAL++KV+EF  AV+ +ED+ V +GG +KAPKVLADIVES+AAAVYVD
Sbjct: 89  KHGLFRFLRHNATALDDKVKEFSDAVLREEDEAVAHGGTVKAPKVLADIVESVAAAVYVD 148

Query: 358 LRFDLHALWKIIITLLEPMVLLDKLQQQPQPVTLLFEVCQKDGKQVDI 501
           + FDL  LW I   LLEP+V  + LQQQPQP+T+LFE+CQK GK+VDI
Sbjct: 149 VNFDLQRLWVIFRGLLEPIVTPEDLQQQPQPMTMLFELCQKKGKEVDI 196


>ref|XP_004147555.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
          Length = 338

 Score =  220 bits (560), Expect = 1e-55
 Identities = 109/167 (65%), Positives = 134/167 (80%)
 Frame = +1

Query: 1   THSSYTDSESYQRLEFVGDAALGLAVTNFVFLTYPELDPGELSLIRAANISTEKLARVAV 180
           TH SY+ S SY+RLEFVGD+A+GLAVTN+ FL  P L  G LSL+RAAN+STEKLARVAV
Sbjct: 27  THPSYSASASYERLEFVGDSAIGLAVTNYFFLASPHLHQGHLSLLRAANVSTEKLARVAV 86

Query: 181 RHGLYKYVRHNATALNEKVREFCAVVEQEDDTVVYGGAMKAPKVLADIVESIAAAVYVDL 360
            HGLY YVR ++ A+++KV+EF   V  E  +V YGG MKAPKVLADIVES+A A+YVD+
Sbjct: 87  THGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVPYGGMMKAPKVLADIVESVAGAIYVDV 146

Query: 361 RFDLHALWKIIITLLEPMVLLDKLQQQPQPVTLLFEVCQKDGKQVDI 501
            FDL  LW II  LLEP+  L++LQ +PQPVT+LF+VCQ++GKQVDI
Sbjct: 147 EFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLFQVCQRNGKQVDI 193


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