BLASTX nr result

ID: Panax21_contig00019226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019226
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24303.3| unnamed protein product [Vitis vinifera]              315   1e-83
ref|XP_002266622.1| PREDICTED: THO complex subunit 7 homolog iso...   315   1e-83
ref|XP_002520058.1| conserved hypothetical protein [Ricinus comm...   306   4e-81
ref|XP_003543006.1| PREDICTED: THO complex subunit 7 homolog [Gl...   303   3e-80
ref|XP_003593729.1| THO complex subunit-like protein [Medicago t...   301   2e-79

>emb|CBI24303.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score =  315 bits (807), Expect = 1e-83
 Identities = 160/223 (71%), Positives = 182/223 (81%)
 Frame = +1

Query: 1   YAFGQLEDDTIIKHXXXXXXXXXXGEPPLKKLQKKFTSFALEIEKDADNYNDCERLAKAL 180
           YAFG  EDDTIIKH          GEPPLKKLQKKFTSF LEIEKD DN++DCERL+KA 
Sbjct: 46  YAFGP-EDDTIIKHRLLTRTTTTRGEPPLKKLQKKFTSFTLEIEKDTDNFSDCERLSKAF 104

Query: 181 LQELTTFELPLLKSKAVIDANLTEKENFNELKGEINRQIIQTEDDIEDLKKKLEESKVER 360
           LQE+TTFE+PLLKSKAVIDANL EKENFNELK +INR I+Q + DIEDLKK+LEESK+ER
Sbjct: 105 LQEMTTFEIPLLKSKAVIDANLREKENFNELKDDINRMILQAQADIEDLKKQLEESKIER 164

Query: 361 QHKEECETIRKLIAMQPPRSETQKVXXXXXXXXXXXXXXNISGSRTLELRKKQFALLLHV 540
           QHKEECE IR+LIAMQPPRSET+K+              N +GSRTLELRKKQFALLLHV
Sbjct: 165 QHKEECEAIRRLIAMQPPRSETEKIISELENEIAALEAENTAGSRTLELRKKQFALLLHV 224

Query: 541 VDELQNTIEEEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 669
           VDELQNTIEEE ++LIE++R+  +EHKNG+ED +G SEAMAVD
Sbjct: 225 VDELQNTIEEEQKNLIEEIRSLTEEHKNGMEDGNGVSEAMAVD 267


>ref|XP_002266622.1| PREDICTED: THO complex subunit 7 homolog isoform 1 [Vitis vinifera]
           gi|359479144|ref|XP_003632225.1| PREDICTED: THO complex
           subunit 7 homolog isoform 2 [Vitis vinifera]
           gi|359479146|ref|XP_003632226.1| PREDICTED: THO complex
           subunit 7 homolog isoform 3 [Vitis vinifera]
          Length = 240

 Score =  315 bits (807), Expect = 1e-83
 Identities = 160/223 (71%), Positives = 182/223 (81%)
 Frame = +1

Query: 1   YAFGQLEDDTIIKHXXXXXXXXXXGEPPLKKLQKKFTSFALEIEKDADNYNDCERLAKAL 180
           YAFG  EDDTIIKH          GEPPLKKLQKKFTSF LEIEKD DN++DCERL+KA 
Sbjct: 19  YAFGP-EDDTIIKHRLLTRTTTTRGEPPLKKLQKKFTSFTLEIEKDTDNFSDCERLSKAF 77

Query: 181 LQELTTFELPLLKSKAVIDANLTEKENFNELKGEINRQIIQTEDDIEDLKKKLEESKVER 360
           LQE+TTFE+PLLKSKAVIDANL EKENFNELK +INR I+Q + DIEDLKK+LEESK+ER
Sbjct: 78  LQEMTTFEIPLLKSKAVIDANLREKENFNELKDDINRMILQAQADIEDLKKQLEESKIER 137

Query: 361 QHKEECETIRKLIAMQPPRSETQKVXXXXXXXXXXXXXXNISGSRTLELRKKQFALLLHV 540
           QHKEECE IR+LIAMQPPRSET+K+              N +GSRTLELRKKQFALLLHV
Sbjct: 138 QHKEECEAIRRLIAMQPPRSETEKIISELENEIAALEAENTAGSRTLELRKKQFALLLHV 197

Query: 541 VDELQNTIEEEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 669
           VDELQNTIEEE ++LIE++R+  +EHKNG+ED +G SEAMAVD
Sbjct: 198 VDELQNTIEEEQKNLIEEIRSLTEEHKNGMEDGNGVSEAMAVD 240


>ref|XP_002520058.1| conserved hypothetical protein [Ricinus communis]
           gi|223540822|gb|EEF42382.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 242

 Score =  306 bits (785), Expect = 4e-81
 Identities = 159/224 (70%), Positives = 178/224 (79%), Gaps = 1/224 (0%)
 Frame = +1

Query: 1   YAFGQLEDDTIIKHXXXXXXXXXXGEPPLKKLQKKFTSFALEIEK-DADNYNDCERLAKA 177
           YAFG LEDD +IKH          GEPPLKKLQKKFTSF +E+EK D DNYNDC RL+KA
Sbjct: 18  YAFGPLEDDIVIKHRLLTRTTTTRGEPPLKKLQKKFTSFVVEVEKNDEDNYNDCVRLSKA 77

Query: 178 LLQELTTFELPLLKSKAVIDANLTEKENFNELKGEINRQIIQTEDDIEDLKKKLEESKVE 357
            LQEL+TFE+PLLKSKAVIDANL EKENF EL  EI RQI Q +DDIEDLKK+LEESK+E
Sbjct: 78  FLQELSTFEIPLLKSKAVIDANLREKENFTELIDEITRQISQAQDDIEDLKKQLEESKIE 137

Query: 358 RQHKEECETIRKLIAMQPPRSETQKVXXXXXXXXXXXXXXNISGSRTLELRKKQFALLLH 537
           RQHKEECE IRKLIAMQPPRSETQK+              NI+GSR LELRKKQFALLLH
Sbjct: 138 RQHKEECEAIRKLIAMQPPRSETQKLIEDLEKEIAGLEAENIAGSRLLELRKKQFALLLH 197

Query: 538 VVDELQNTIEEEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 669
           VVDELQN+IEE+ ++LIE+MR A ++ KNG+EDA G SEAMAVD
Sbjct: 198 VVDELQNSIEEDQKNLIEEMRMATEDQKNGMEDADGGSEAMAVD 241


>ref|XP_003543006.1| PREDICTED: THO complex subunit 7 homolog [Glycine max]
          Length = 242

 Score =  303 bits (777), Expect = 3e-80
 Identities = 153/224 (68%), Positives = 179/224 (79%), Gaps = 1/224 (0%)
 Frame = +1

Query: 1   YAFGQLEDDTIIKHXXXXXXXXXXGEPPLKKLQKKFTSFALEIEKDADN-YNDCERLAKA 177
           YAFG  EDD IIKH          G+PPLKKLQKKFTSF  E++KD DN YN+C++LA+A
Sbjct: 19  YAFGPSEDDVIIKHRLLTRTTTTRGDPPLKKLQKKFTSFVSEVDKDEDNNYNECDKLARA 78

Query: 178 LLQELTTFELPLLKSKAVIDANLTEKENFNELKGEINRQIIQTEDDIEDLKKKLEESKVE 357
            LQELTTFE+PLLKSKA+++AN+ EKENFNELK E+NRQI+Q +DDIEDLKK+LEESKVE
Sbjct: 79  FLQELTTFEIPLLKSKAIVEANIREKENFNELKEEMNRQILQAQDDIEDLKKQLEESKVE 138

Query: 358 RQHKEECETIRKLIAMQPPRSETQKVXXXXXXXXXXXXXXNISGSRTLELRKKQFALLLH 537
           R+HKEECE IRKLIAMQPPRSET KV              N +GSR LELRKKQFALLLH
Sbjct: 139 RRHKEECEAIRKLIAMQPPRSETMKVISELENEIAALDAENTAGSRLLELRKKQFALLLH 198

Query: 538 VVDELQNTIEEEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 669
           VVDELQNTIEEE +SL+E+MR A +E KNG+ED +G +EAMA+D
Sbjct: 199 VVDELQNTIEEEQKSLVEEMRMATEELKNGMEDTNGGAEAMAID 242


>ref|XP_003593729.1| THO complex subunit-like protein [Medicago truncatula]
           gi|355482777|gb|AES63980.1| THO complex subunit-like
           protein [Medicago truncatula]
           gi|388493192|gb|AFK34662.1| unknown [Medicago
           truncatula]
          Length = 242

 Score =  301 bits (770), Expect = 2e-79
 Identities = 153/223 (68%), Positives = 177/223 (79%)
 Frame = +1

Query: 1   YAFGQLEDDTIIKHXXXXXXXXXXGEPPLKKLQKKFTSFALEIEKDADNYNDCERLAKAL 180
           YAFG   DD IIKH          GEPPLKKLQKKFTSF  E++KD DNYNDCE+LA+A 
Sbjct: 19  YAFGPSIDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVSEVDKDEDNYNDCEKLARAF 78

Query: 181 LQELTTFELPLLKSKAVIDANLTEKENFNELKGEINRQIIQTEDDIEDLKKKLEESKVER 360
           LQELTTFE+PLLKSKA+++AN+ EK+NFNELK E+NRQI Q + DIEDLKK+LEESKVER
Sbjct: 79  LQELTTFEIPLLKSKAIVEANVREKDNFNELKDEMNRQIAQAQVDIEDLKKQLEESKVER 138

Query: 361 QHKEECETIRKLIAMQPPRSETQKVXXXXXXXXXXXXXXNISGSRTLELRKKQFALLLHV 540
           +HKEECE IRKLIA+QPPRSETQKV              N +GSR LELRKKQF+LLL V
Sbjct: 139 RHKEECEAIRKLIAVQPPRSETQKVLSELEKEIAALDAENTAGSRLLELRKKQFSLLLQV 198

Query: 541 VDELQNTIEEEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 669
           VDELQNTIEE+ +SL+E+MR A +E KNG+EDASG S+AMAVD
Sbjct: 199 VDELQNTIEEDQKSLVEEMRLATEELKNGMEDASGGSDAMAVD 241


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