BLASTX nr result

ID: Panax21_contig00019225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019225
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549541.1| PREDICTED: probable cyclic nucleotide-gated ...    61   1e-07
ref|XP_003519149.1| PREDICTED: probable cyclic nucleotide-gated ...    60   2e-07
ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putativ...    60   3e-07
ref|XP_003610314.1| CNGC5-like protein [Medicago truncatula] gi|...    59   4e-07
ref|XP_002325129.1| predicted protein [Populus trichocarpa] gi|2...    58   8e-07

>ref|XP_003549541.1| PREDICTED: probable cyclic nucleotide-gated ion channel 5-like
           [Glycine max]
          Length = 728

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/40 (75%), Positives = 36/40 (90%)
 Frame = +3

Query: 426 MSISPMRLIIV*RFLQRSKGSDVLATKKALLFIILLQYIP 545
           +S+ P+  I+V RFLQRSKGSDVLATK+ALLFIILLQY+P
Sbjct: 206 LSVLPIPQIVVWRFLQRSKGSDVLATKQALLFIILLQYVP 245


>ref|XP_003519149.1| PREDICTED: probable cyclic nucleotide-gated ion channel 5-like
           [Glycine max]
          Length = 728

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = +3

Query: 426 MSISPMRLIIV*RFLQRSKGSDVLATKKALLFIILLQYIP 545
           +S+ P+  I+V RFLQRSKGSDVLATK+ALL+IILLQY+P
Sbjct: 206 LSVLPIPQIVVWRFLQRSKGSDVLATKQALLYIILLQYVP 245


>ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223531133|gb|EEF32981.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 735

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +3

Query: 426 MSISPMRLIIV*RFLQRSKGSDVLATKKALLFIILLQYIP 545
           +S+ P+  I+V RFLQRS GSDVLATK+ALLFI+LLQYIP
Sbjct: 209 LSVLPLPQIVVWRFLQRSNGSDVLATKQALLFIVLLQYIP 248


>ref|XP_003610314.1| CNGC5-like protein [Medicago truncatula]
           gi|355511369|gb|AES92511.1| CNGC5-like protein [Medicago
           truncatula]
          Length = 731

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = +3

Query: 426 MSISPMRLIIV*RFLQRSKGSDVLATKKALLFIILLQYIP 545
           +S+ P+  I+V RFLQRSK SDVLATK+ALLFIILLQYIP
Sbjct: 208 LSVLPVPQIVVWRFLQRSKSSDVLATKQALLFIILLQYIP 247


>ref|XP_002325129.1| predicted protein [Populus trichocarpa] gi|222866563|gb|EEF03694.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +3

Query: 426 MSISPMRLIIV*RFLQRSKGSDVLATKKALLFIILLQYIP 545
           +S+ P+  I+V RFL RSKGSDVLATK+ALL+IILLQYIP
Sbjct: 208 LSVLPLPQIVVWRFLLRSKGSDVLATKQALLYIILLQYIP 247


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