BLASTX nr result

ID: Panax21_contig00019219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019219
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related prote...    71   1e-10
ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-...    70   2e-10
sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related prote...    69   3e-10
sp|Q9SXN6.1|RBR1_TOBAC RecName: Full=Retinoblastoma-related prot...    69   5e-10
gb|AFD98848.1| retinoblastoma-related protein 1 [Solanum lycoper...    68   9e-10

>sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related protein
           gi|23429044|gb|AAM77469.1| retinoblastoma-like protein
           [Cocos nucifera]
          Length = 1011

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/46 (73%), Positives = 38/46 (82%)
 Frame = -3

Query: 451 KTGRDDVDIITFYNEIFIPSVKPLLVELSPAGNAQKSNQMSEATNN 314
           KTG++ VDIITFYNE+FIPSVKPLLVEL PAG AQKS    E +NN
Sbjct: 838 KTGQEHVDIITFYNEVFIPSVKPLLVELGPAGVAQKSKSSPEDSNN 883


>ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
          Length = 1002

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = -3

Query: 451 KTGRDDVDIITFYNEIFIPSVKPLLVELSPAGNAQKSNQMSEATNNN 311
           +TG+D VDIITFYNEIFIPSVKPLLVEL PAG   KS+++ E  N N
Sbjct: 829 RTGQDHVDIITFYNEIFIPSVKPLLVELGPAGPTPKSDRIPEVNNKN 875


>sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related protein
           gi|70568829|dbj|BAE06273.1| retinoblastoma [Scutellaria
           baicalensis]
          Length = 1006

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/46 (67%), Positives = 39/46 (84%)
 Frame = -3

Query: 451 KTGRDDVDIITFYNEIFIPSVKPLLVELSPAGNAQKSNQMSEATNN 314
           K+G D VDIITFYNEIF+P+VKPLLVE++P G+AQ  +Q+ EA NN
Sbjct: 833 KSGPDHVDIITFYNEIFVPAVKPLLVEIAPGGSAQSGSQVPEAKNN 878


>sp|Q9SXN6.1|RBR1_TOBAC RecName: Full=Retinoblastoma-related protein 1; Short=NtRb1
           gi|4586799|dbj|BAA76477.1| NtRb1 [Nicotiana tabacum]
          Length = 961

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/39 (79%), Positives = 37/39 (94%)
 Frame = -3

Query: 454 QKTGRDDVDIITFYNEIFIPSVKPLLVELSPAGNAQKSN 338
           ++TG D VDIITFYNE+FIPSVKPLLVEL+PAGNA+K+N
Sbjct: 796 KRTGADHVDIITFYNEMFIPSVKPLLVELAPAGNAEKNN 834


>gb|AFD98848.1| retinoblastoma-related protein 1 [Solanum lycopersicum]
          Length = 1018

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = -3

Query: 451 KTGRDDVDIITFYNEIFIPSVKPLLVELSPAGNAQKSNQMSE 326
           KTG + VDIITFYNE+FIPSVKPLLVEL+PAGN QK+N + +
Sbjct: 846 KTGSEHVDIITFYNEMFIPSVKPLLVELAPAGNEQKNNHVEK 887


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