BLASTX nr result
ID: Panax21_contig00019212
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00019212
(1437 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li... 110 4e-50
emb|CBI20795.3| unnamed protein product [Vitis vinifera] 110 4e-50
sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related prote... 91 8e-43
sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related prote... 94 2e-42
sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related prote... 91 2e-42
>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
Full=Retinoblastoma-related protein
gi|359392418|gb|AEV45768.1| RBR protein [Vitis
pseudoreticulata]
Length = 1007
Score = 110 bits (275), Expect(3) = 4e-50
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +3
Query: 663 FLNHHIDQIILCCLYEVAKISQLNLTFKEIIHNYKKQPQCKPQVFQSVFVDWSIARRNG 839
F N HIDQIILCC Y +AKISQ+NLTF+EIIHNY+KQPQCKPQ+F+SVFVDWS ARRNG
Sbjct: 775 FFNRHIDQIILCCFYGLAKISQMNLTFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNG 833
Score = 74.3 bits (181), Expect(3) = 4e-50
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 521 LNSLSCHIVKLAAVRINGMVERLQLSQQIRENVYCLFQQILVQRPALFF 667
+N I+KLAAVRINGMVERLQLSQQ+RENVYCLFQQIL +R +LFF
Sbjct: 728 INIFFSKIIKLAAVRINGMVERLQLSQQMRENVYCLFQQILNRRTSLFF 776
Score = 62.4 bits (150), Expect(3) = 4e-50
Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +1
Query: 916 KTGRDDVDIITFYNEIIIPSVKPLLVELAP-AGNAQKSNQMSEATNNN 1056
KTG++ VDIITFYNEI IP+VKPLL+E+ P G K+N++ E NNN
Sbjct: 834 KTGKEHVDIITFYNEIFIPAVKPLLMEIGPGGGTTTKTNRVPEVNNNN 881
>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
Length = 1006
Score = 110 bits (275), Expect(3) = 4e-50
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +3
Query: 663 FLNHHIDQIILCCLYEVAKISQLNLTFKEIIHNYKKQPQCKPQVFQSVFVDWSIARRNG 839
F N HIDQIILCC Y +AKISQ+NLTF+EIIHNY+KQPQCKPQ+F+SVFVDWS ARRNG
Sbjct: 774 FFNRHIDQIILCCFYGLAKISQMNLTFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNG 832
Score = 74.3 bits (181), Expect(3) = 4e-50
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 521 LNSLSCHIVKLAAVRINGMVERLQLSQQIRENVYCLFQQILVQRPALFF 667
+N I+KLAAVRINGMVERLQLSQQ+RENVYCLFQQIL +R +LFF
Sbjct: 727 INIFFSKIIKLAAVRINGMVERLQLSQQMRENVYCLFQQILNRRTSLFF 775
Score = 62.4 bits (150), Expect(3) = 4e-50
Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +1
Query: 916 KTGRDDVDIITFYNEIIIPSVKPLLVELAP-AGNAQKSNQMSEATNNN 1056
KTG++ VDIITFYNEI IP+VKPLL+E+ P G K+N++ E NNN
Sbjct: 833 KTGKEHVDIITFYNEIFIPAVKPLLMEIGPGGGTTTKTNRVPEVNNNN 880
>sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related protein
gi|167593883|gb|ABZ85628.1| retinoblastoma-related
protein [Hieracium piloselloides]
Length = 1005
Score = 90.9 bits (224), Expect(3) = 8e-43
Identities = 42/59 (71%), Positives = 48/59 (81%)
Frame = +3
Query: 663 FLNHHIDQIILCCLYEVAKISQLNLTFKEIIHNYKKQPQCKPQVFQSVFVDWSIARRNG 839
F N HIDQIILCC Y VAKI+QL+LTFKEII NY+KQP CKPQVF++VFVD + R G
Sbjct: 772 FFNRHIDQIILCCFYGVAKITQLSLTFKEIIFNYRKQPHCKPQVFRAVFVDDRSSSRRG 830
Score = 72.8 bits (177), Expect(3) = 8e-43
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +2
Query: 521 LNSLSCHIVKLAAVRINGMVERLQLSQQIRENVYCLFQQILVQRPALFF 667
+N IVKLAAVRINGMVER+QL+QQIRE VYCLFQQIL QR +LFF
Sbjct: 725 VNLFFSKIVKLAAVRINGMVERMQLTQQIRERVYCLFQQILGQRTSLFF 773
Score = 58.9 bits (141), Expect(3) = 8e-43
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +1
Query: 916 KTGRDDVDIITFYNEIIIPSVKPLLVELAPAGNAQKSNQMSEATN 1050
KTG+D VDII FYNEI IPSVKPLLVELAP+ + N TN
Sbjct: 831 KTGQDHVDIIMFYNEIFIPSVKPLLVELAPSNVPKNPNNQVSETN 875
>sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related protein
gi|23429044|gb|AAM77469.1| retinoblastoma-like protein
[Cocos nucifera]
Length = 1011
Score = 93.6 bits (231), Expect(3) = 2e-42
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +3
Query: 663 FLNHHIDQIILCCLYEVAKISQLNLTFKEIIHNYKKQPQCKPQVFQSVFVDWSIARRNG 839
F N HIDQIILC Y VAKISQ+ LTFKEII+NY+KQPQCKPQVF+SVFV W NG
Sbjct: 779 FFNRHIDQIILCSFYGVAKISQMALTFKEIIYNYRKQPQCKPQVFRSVFVHWPSTSHNG 837
Score = 68.6 bits (166), Expect(3) = 2e-42
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +1
Query: 916 KTGRDDVDIITFYNEIIIPSVKPLLVELAPAGNAQKSNQMSEATNN 1053
KTG++ VDIITFYNE+ IPSVKPLLVEL PAG AQKS E +NN
Sbjct: 838 KTGQEHVDIITFYNEVFIPSVKPLLVELGPAGVAQKSKSSPEDSNN 883
Score = 59.3 bits (142), Expect(3) = 2e-42
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2
Query: 542 IVKLAAVRINGMVERLQLSQQIRENVYCLFQQILVQRPALFF 667
IVKLAA+RI + ERLQL QQI E VYCL QQIL QR ALFF
Sbjct: 739 IVKLAAIRIRSLCERLQLPQQILEWVYCLIQQILSQRTALFF 780
>sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related protein
gi|167593891|gb|ABZ85632.1| retinoblastoma-related
protein [Hieracium pilosella]
Length = 1008
Score = 90.5 bits (223), Expect(3) = 2e-42
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = +3
Query: 663 FLNHHIDQIILCCLYEVAKISQLNLTFKEIIHNYKKQPQCKPQVFQSVFVD 815
F N HIDQIILCC Y VAKISQL+LTFKEII NY+KQP CKPQVF++VFVD
Sbjct: 772 FFNRHIDQIILCCFYGVAKISQLSLTFKEIIFNYRKQPHCKPQVFRAVFVD 822
Score = 72.8 bits (177), Expect(3) = 2e-42
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +2
Query: 521 LNSLSCHIVKLAAVRINGMVERLQLSQQIRENVYCLFQQILVQRPALFF 667
+N IVKLAAVRINGMVER+QL+QQIRE VYCLFQQIL QR +LFF
Sbjct: 725 VNLFFSKIVKLAAVRINGMVERMQLTQQIRERVYCLFQQILGQRTSLFF 773
Score = 57.8 bits (138), Expect(3) = 2e-42
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 910 KQKTGRDDVDIITFYNEIIIPSVKPLLVELAPAGNAQK--SNQMSEATNNN 1056
+ KTG+D VDII FYNE+ IPSVKPLLVELAP+ N K +NQ+S++ +
Sbjct: 829 RSKTGQDHVDIIMFYNEVFIPSVKPLLVELAPS-NVPKNPNNQVSDSNKKD 878