BLASTX nr result

ID: Panax21_contig00019206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019206
         (1126 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264...    72   4e-18
ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I sub...    65   3e-16
ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycin...    65   3e-16
ref|XP_002510510.1| conserved hypothetical protein [Ricinus comm...    62   9e-16
ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I sub...    61   2e-14

>ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera]
           gi|302142630|emb|CBI19833.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score = 72.4 bits (176), Expect(2) = 4e-18
 Identities = 36/52 (69%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = +3

Query: 513 RFNETFDGVVLAYDVNIIGDLAKILPGIHPYFGVRLTGK-LLFYPNPDIILE 665
           +FNE FDGVVLAYDV+I    AKILPGIHPYFGVRL  K LLF P P++++E
Sbjct: 37  KFNEIFDGVVLAYDVDIPSKDAKILPGIHPYFGVRLKAKLLLFSPKPNMLIE 88



 Score = 46.2 bits (108), Expect(2) = 4e-18
 Identities = 20/28 (71%), Positives = 25/28 (89%)
 Frame = +1

Query: 664 KHGKEVYVSRLHKQHKIKVGTIIRFIVK 747
           KHG+ V+VSR HK+H IKVGT+IRF+VK
Sbjct: 125 KHGEAVFVSRSHKRHVIKVGTMIRFLVK 152


>ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
           [Glycine max]
          Length = 232

 Score = 65.5 bits (158), Expect(2) = 3e-16
 Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +3

Query: 513 RFNETFDGVVLAYDVNIIGDLAKILPGIHPYFGVRL-TGKLLFYPNPDIILE 665
           +F+E F GVVLAYD+N +   AKILPG+HPYFGV+L    LLF P P+++LE
Sbjct: 37  KFSEIFHGVVLAYDLNSLHTCAKILPGVHPYFGVKLKVNLLLFSPKPNMLLE 88



 Score = 47.0 bits (110), Expect(2) = 3e-16
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = +1

Query: 664 KHGKEVYVSRLHKQHKIKVGTIIRFIVK 747
           K G+EVY SR HKQH IKVGT+IRF+VK
Sbjct: 125 KRGQEVYASRSHKQHVIKVGTMIRFLVK 152


>ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycine max]
           gi|255631830|gb|ACU16282.1| unknown [Glycine max]
          Length = 232

 Score = 65.1 bits (157), Expect(2) = 3e-16
 Identities = 32/51 (62%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = +3

Query: 516 FNETFDGVVLAYDVNIIGDLAKILPGIHPYFGVRL-TGKLLFYPNPDIILE 665
           F+E FDGVVLAYDVN     AKIL G+HPYFGV+L    LLF P P+++LE
Sbjct: 38  FSEIFDGVVLAYDVNSFDTCAKILSGVHPYFGVKLKVNLLLFSPKPNMLLE 88



 Score = 47.0 bits (110), Expect(2) = 3e-16
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = +1

Query: 664 KHGKEVYVSRLHKQHKIKVGTIIRFIVK 747
           K G+EVYVSR HK+H IKVGT+IRF+VK
Sbjct: 125 KRGQEVYVSRSHKRHVIKVGTMIRFLVK 152


>ref|XP_002510510.1| conserved hypothetical protein [Ricinus communis]
           gi|223551211|gb|EEF52697.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 229

 Score = 62.4 bits (150), Expect(2) = 9e-16
 Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
 Frame = +3

Query: 513 RFNETFDGVVLAYDVNIIGDLAKILPGIHPYFGVRLTGKLL-FYPNPDIILE 665
           +FNE FDGVVLAY  N     A+IL G+HPYFGVRL   +L F P PD++LE
Sbjct: 37  KFNENFDGVVLAYAFNAPDKQARILCGVHPYFGVRLQATMLVFSPKPDMLLE 88



 Score = 48.1 bits (113), Expect(2) = 9e-16
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = +1

Query: 664 KHGKEVYVSRLHKQHKIKVGTIIRFIVK 747
           KHG+ +YVSR HKQH IKVGT+IRF+VK
Sbjct: 125 KHGEALYVSRPHKQHVIKVGTMIRFVVK 152


>ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
           [Cucumis sativus] gi|449476884|ref|XP_004154864.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           rpa43-like [Cucumis sativus]
          Length = 231

 Score = 61.2 bits (147), Expect(2) = 2e-14
 Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
 Frame = +3

Query: 513 RFNETFDGVVLAYDVNIIGDLAKILPGIHPYFGVRLTGK-LLFYPNPDIILE 665
           +F+E F+GV+LAY+  II   AKIL G+HPYFGV +  K LLF P P+++LE
Sbjct: 37  KFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLE 88



 Score = 44.7 bits (104), Expect(2) = 2e-14
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +1

Query: 664 KHGKEVYVSRLHKQHKIKVGTIIRFIVK 747
           KHG+E++VSR HK H IKVGT+IR +VK
Sbjct: 125 KHGEEMFVSRAHKHHIIKVGTMIRLLVK 152


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