BLASTX nr result

ID: Panax21_contig00019201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019201
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271327.2| PREDICTED: WD repeat-containing protein 43-l...   237   2e-60
emb|CAN79552.1| hypothetical protein VITISV_025726 [Vitis vinifera]   232   7e-59
ref|XP_002315482.1| predicted protein [Populus trichocarpa] gi|2...   212   6e-53
ref|XP_002871466.1| hypothetical protein ARALYDRAFT_325654 [Arab...   210   2e-52
emb|CBL94162.1| putative transducin family protein / WD-40 repea...   197   3e-48

>ref|XP_002271327.2| PREDICTED: WD repeat-containing protein 43-like [Vitis vinifera]
            gi|296083309|emb|CBI22945.3| unnamed protein product
            [Vitis vinifera]
          Length = 628

 Score =  237 bits (604), Expect = 2e-60
 Identities = 134/271 (49%), Positives = 174/271 (64%), Gaps = 30/271 (11%)
 Frame = +1

Query: 16   DGILLPIGQTYKSKKGSDLQNQITTLDRANAEDALLPVPKILNLVDGQSGAKSATRNDDI 195
            DGILLP+ Q++KSKKG  +++ +T LDRANAE+ALLP+PKI +  +     +++  + D 
Sbjct: 359  DGILLPMDQSHKSKKGLGVKDGVTALDRANAEEALLPIPKIFDFHEKNKRYQNSNIDPDE 418

Query: 196  VFAD-------------------------VTYCMEDRLRSLGILSNDGDLTSYSQLDNRI 300
            + AD                          T C+E++LRSLG+L N  DLTS S L++R 
Sbjct: 419  IMADDLMNVRSQNKAVESKDGLESVEASNETSCLEEQLRSLGLLDNKDDLTSNSMLNSRK 478

Query: 301  LKGINFEPNTPQKKMRAIISSMIPSDAYKLLKHLLAMWQSRSCTGKYVLPWICCVLVNHS 480
             KGI+ E N P KKMRA +SS+IP DAY+LLK L+ MWQSRSC+G YVLPWI  +LVNHS
Sbjct: 479  FKGISLEENMPPKKMRAAVSSIIPGDAYELLKVLVTMWQSRSCSGNYVLPWIYTILVNHS 538

Query: 481  DYIVAEEPKTKLLDSLYKLTNSKGAAIHSLLQLSGRLQLVTAQIDKAANNKSQPIQHDKQ 660
             +IV++EP T+LLDSL++ T S+G A+ SLLQLSG LQLV AQIDKA+ N SQ IQH  Q
Sbjct: 539  QHIVSQEPVTQLLDSLHQSTKSRGTAVQSLLQLSGGLQLVMAQIDKASQNISQ-IQHGHQ 597

Query: 661  MD-----XXXXXXXXXXXXXXXTQNSSDNDD 738
            +D                    +Q SSDNDD
Sbjct: 598  VDESEDEEEEVEDVLYGEEDDESQISSDNDD 628


>emb|CAN79552.1| hypothetical protein VITISV_025726 [Vitis vinifera]
          Length = 692

 Score =  232 bits (591), Expect = 7e-59
 Identities = 134/271 (49%), Positives = 173/271 (63%), Gaps = 30/271 (11%)
 Frame = +1

Query: 16   DGILLPIGQTYKSKKGSDLQNQITTLDRANAEDALLPVPKILN----------------- 144
            DGILLP+ Q++KSKKG  +++ +T LDRANAE+ALLP+PKI +                 
Sbjct: 423  DGILLPMDQSHKSKKGLGVKDGVTALDRANAEEALLPIPKIFDFHEKNKRYQNSNIDPDE 482

Query: 145  -----LVDGQSGAKSATRNDDIVFADV---TYCMEDRLRSLGILSNDGDLTSYSQLDNRI 300
                 L++ +S  K+    DD+   +    T C+E++LRSLG+L N  DLTS S L++  
Sbjct: 483  IMADDLMNVRSQNKAVESKDDLESVEASNETSCLEEQLRSLGLLDNKDDLTSNSMLNSTK 542

Query: 301  LKGINFEPNTPQKKMRAIISSMIPSDAYKLLKHLLAMWQSRSCTGKYVLPWICCVLVNHS 480
             KGI+ E N P KKMRA +SS+IP DAY+LLK L+ MWQSRSC+G YVLPWI  +LVNHS
Sbjct: 543  FKGISLEENMPPKKMRAAVSSIIPGDAYELLKVLVTMWQSRSCSGNYVLPWIYTILVNHS 602

Query: 481  DYIVAEEPKTKLLDSLYKLTNSKGAAIHSLLQLSGRLQLVTAQIDKAANNKSQPIQHDKQ 660
             +IV++EP  +LLDSL+  T S+G A+ SLLQLSG LQLV AQIDKA+ N SQ IQH  Q
Sbjct: 603  QHIVSQEPVIQLLDSLHLSTKSRGTAVQSLLQLSGGLQLVMAQIDKASQNISQ-IQHGHQ 661

Query: 661  MD-----XXXXXXXXXXXXXXXTQNSSDNDD 738
            +D                    +Q SSDNDD
Sbjct: 662  VDESEDEEEEVEDVLYGEEDDESQISSDNDD 692


>ref|XP_002315482.1| predicted protein [Populus trichocarpa] gi|222864522|gb|EEF01653.1|
            predicted protein [Populus trichocarpa]
          Length = 617

 Score =  212 bits (540), Expect = 6e-53
 Identities = 120/236 (50%), Positives = 158/236 (66%), Gaps = 14/236 (5%)
 Frame = +1

Query: 1    LKSTPDGILLPIGQTYKS-KKGSDLQNQITTLDRANAEDALLPVPKI----------LNL 147
            L S+ DG+LLP+ Q+  + KK  DLQN++T LDRAN EDALLP+PK+          +N+
Sbjct: 354  LNSSQDGVLLPLSQSLSNTKKARDLQNRVTALDRANVEDALLPLPKVYDLHEKKMRNMNI 413

Query: 148  VDGQSGAKSATRNDDIVFA--DVTYCMEDRLRSLGILSNDGDLTSYSQLDNRILKGINFE 321
            VD     + +  + D++     VT  ME +LR L IL +  D      LD+  LKGIN E
Sbjct: 414  VDHDEVMEESAESKDVMVEVDAVTTSMEKQLRLLNILGSKDDGILSPTLDSATLKGINLE 473

Query: 322  PNTPQKKMRAIISSMIPSDAYKLLKHLLAMWQSRSCTGKYVLPWICCVLVNHSDYIVAEE 501
             N P KKMRA + SM PS+AYKLL+ L+A WQSRS +GK VLPWI C+LVNH  YIVA+E
Sbjct: 474  DNIPLKKMRATVLSMEPSNAYKLLEVLVAKWQSRSNSGKCVLPWIYCILVNHGQYIVAQE 533

Query: 502  -PKTKLLDSLYKLTNSKGAAIHSLLQLSGRLQLVTAQIDKAANNKSQPIQHDKQMD 666
             P++++L+SL K+T S+  A+  LLQL+GRLQLVTAQIDK A +K+    H+ QMD
Sbjct: 534  KPESQMLNSLLKITKSRAVAVQPLLQLAGRLQLVTAQIDKVALSKNPISLHNDQMD 589


>ref|XP_002871466.1| hypothetical protein ARALYDRAFT_325654 [Arabidopsis lyrata subsp.
            lyrata] gi|297317303|gb|EFH47725.1| hypothetical protein
            ARALYDRAFT_325654 [Arabidopsis lyrata subsp. lyrata]
          Length = 615

 Score =  210 bits (535), Expect = 2e-52
 Identities = 112/229 (48%), Positives = 165/229 (72%), Gaps = 7/229 (3%)
 Frame = +1

Query: 1    LKSTPDGILLPIGQTY-KSKKGSDLQNQITTLDRANAEDALLPVPKILNLVDGQS-GAKS 174
            L ++ DGILLPI Q+  KS KG  +QN++TTLDRA+AEDALLP+ ++ +L + +S    S
Sbjct: 350  LNASKDGILLPITQSVSKSSKGKGVQNKVTTLDRAHAEDALLPIARVADLHEKKSVQLHS 409

Query: 175  ATRNDDIVFADV-----TYCMEDRLRSLGILSNDGDLTSYSQLDNRILKGINFEPNTPQK 339
            + ++ D+V         T+ MED+LRSLGIL    +  + S     I+ GI+ E   P K
Sbjct: 410  SDKDTDMVDQSQADHVETFSMEDKLRSLGILGGTDEQKNVSYAS--IIDGIDLEAYLPPK 467

Query: 340  KMRAIISSMIPSDAYKLLKHLLAMWQSRSCTGKYVLPWICCVLVNHSDYIVAEEPKTKLL 519
            K+++ +SSM PS A+K L+ L+AMWQ+R+C G+++LPWI  ++VNHS YI+++EPK +LL
Sbjct: 468  KLKSAVSSMEPSSAFKTLEALVAMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQLL 527

Query: 520  DSLYKLTNSKGAAIHSLLQLSGRLQLVTAQIDKAANNKSQPIQHDKQMD 666
            ++L K+T S+G A+  LLQLSGRLQLVTAQI+KAA N++Q + HD+++D
Sbjct: 528  NTLVKITKSRGTALQQLLQLSGRLQLVTAQINKAAVNQTQTVAHDQEID 576


>emb|CBL94162.1| putative transducin family protein / WD-40 repeat family protein
            [Malus x domestica]
          Length = 629

 Score =  197 bits (500), Expect = 3e-48
 Identities = 114/247 (46%), Positives = 155/247 (62%), Gaps = 25/247 (10%)
 Frame = +1

Query: 1    LKSTPDGILLPIGQTY-KSKKGSDLQNQITTLDRANAEDALLPVPKILN----------- 144
            L S+ DG+LLP+ Q+  KSKKG ++QN++  LDRANAE+AL P+PK+ +           
Sbjct: 354  LSSSHDGVLLPMSQSLVKSKKGQNVQNRVIALDRANAEEALHPMPKVFDSHEKKKRHDKL 413

Query: 145  ----------LVDGQSGAKSATRNDDIVFADV---TYCMEDRLRSLGILSNDGDLTSYSQ 285
                      L D +  A      DD+V  +      CMEDRL++LGILS   D T  S 
Sbjct: 414  SFGQDEEMADLDDSRGRAGLVKSKDDMVELEADTAAICMEDRLKALGILSKVDDHTFNST 473

Query: 286  LDNRILKGINFEPNTPQKKMRAIISSMIPSDAYKLLKHLLAMWQSRSCTGKYVLPWICCV 465
            L++   KGI+ + N P KKMR  + S+ PSDA KLL  L+A WQ+RS +G  VLPWI  +
Sbjct: 474  LNSATFKGIDLQRNMPHKKMREAVLSLEPSDACKLLGVLVATWQTRSSSGNNVLPWIYSI 533

Query: 466  LVNHSDYIVAEEPKTKLLDSLYKLTNSKGAAIHSLLQLSGRLQLVTAQIDKAANNKSQPI 645
            LVNH   I++++ +T++L SL K+T S+GAAI  LLQ+SGRLQLV AQIDKA + K+Q  
Sbjct: 534  LVNHGHDIMSQKSETQMLSSLLKVTKSRGAAIQPLLQVSGRLQLVMAQIDKATHAKTQIS 593

Query: 646  QHDKQMD 666
             H+ +MD
Sbjct: 594  SHEHEMD 600


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