BLASTX nr result

ID: Panax21_contig00019193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019193
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing...    61   2e-07
ref|XP_002319179.1| predicted protein [Populus trichocarpa] gi|2...    60   5e-07
emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]    60   5e-07
ref|XP_002525713.1| sgd1p, putative [Ricinus communis] gi|223535...    56   8e-06

>ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing protein 1 [Vitis
           vinifera]
          Length = 700

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
 Frame = -1

Query: 296 EKSKKTKFEEYLEMDMQKGAVPSEEDFALESXXXXXXXXXXXXXXXXXXDINMLFEGIPS 117
           ++S KT FE +LEMDMQK  + ++ED  LE                   D+N LFEGIPS
Sbjct: 9   KRSSKTGFESFLEMDMQKD-ISAQEDLELERKLAKKLRVKNGKLGGEDDDVNFLFEGIPS 67

Query: 116 ILDSLENEE-TNAEEAPRKSLDNSSILRKRKKK 21
           ++ SL  E  T A+E   KS   SS+ +KRKK+
Sbjct: 68  VIGSLGEEGITEADEFSVKSSAKSSLGKKRKKR 100


>ref|XP_002319179.1| predicted protein [Populus trichocarpa] gi|222857555|gb|EEE95102.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
 Frame = -1

Query: 455 KSRNCLSSEEELDGEKAGDSVDGESEPWNGTSVRSCKMELNSLSKSNSSPTIIEK----- 291
           KS+N L  +E++  +      +   E  N  +    K+ L   S SN+  T+ EK     
Sbjct: 34  KSKN-LKEKEDMQEDATNSRRNQSPEEKNVPTKMERKLGLLGHSGSNAPKTVKEKKGMRR 92

Query: 290 SKKTKFEEYLEMDMQKGAVPSEEDFALESXXXXXXXXXXXXXXXXXXDINMLFEGIPSIL 111
           + KTKFEEYLEMD +     +EED  +E                   +++ML EGIPS+L
Sbjct: 93  NLKTKFEEYLEMDTKDAC--AEEDLEMERRLAKKLKLKDGKLKRMDDEMDMLLEGIPSVL 150

Query: 110 DSLENEET-NAEEAPRKSLDNSSILRKRKKKAS 15
           DS +  E  +A +   + +++++  +K KKK S
Sbjct: 151 DSFDKGEVPDANQFTIEGVEDTTSDKKHKKKKS 183


>emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]
          Length = 700

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
 Frame = -1

Query: 296 EKSKKTKFEEYLEMDMQKGAVPSEEDFALESXXXXXXXXXXXXXXXXXXDINMLFEGIPS 117
           ++S KT FE +LEMDMQK  + ++ED  LE                   D+N LFEGIPS
Sbjct: 9   KRSSKTGFESFLEMDMQKD-ISAQEDLELERKLAKKLRVKNGKLGGEDDDVNFLFEGIPS 67

Query: 116 ILDSLENEE-TNAEEAPRKSLDNSSILRKRKKK 21
           ++ SL  E  T A+E   KS   SS  +KRKK+
Sbjct: 68  VIGSLGEEGITEADEFSVKSSAKSSXGKKRKKR 100


>ref|XP_002525713.1| sgd1p, putative [Ricinus communis] gi|223535013|gb|EEF36696.1|
           sgd1p, putative [Ricinus communis]
          Length = 746

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
 Frame = -1

Query: 458 KKSRNCLSSEEELDGEKAGDSVDGESEPWNGTSVRSCKMELNSLSKSNS----SPTI--- 300
           K S + + +  E DG K  D+  G  +   G +V     E  S S  N+    S T+   
Sbjct: 54  KSSNSFIQNLSERDG-KPQDTNSGRHQDLEGKNVGVKTKEAKSRSSQNNGSSASKTVKQR 112

Query: 299 --IEKSKKTKFEEYLEMDMQKGAVPSEEDFALESXXXXXXXXXXXXXXXXXXDINMLFEG 126
             ++++ KTKF E+LEMDM+KG + ++ED  +E                   ++N+L +G
Sbjct: 113 KGLKRNAKTKFLEFLEMDMKKGDLLAQEDLEIERRLSKKLRVKDGKLRGTDDELNLLLDG 172

Query: 125 IPSILDSLENEETNAEEAPRKSLDNSSILRKRKKKASKQ 9
           I            +A+E P + L+N S  + RK+  SKQ
Sbjct: 173 IFDC-------GPDADEFPVERLENISHKKNRKRNKSKQ 204


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