BLASTX nr result

ID: Panax21_contig00019182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019182
         (1960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Viti...   428   e-146
emb|CAN65317.1| hypothetical protein VITISV_006410 [Vitis vinifera]   428   e-146
gb|ABK95830.1| unknown [Populus trichocarpa]                          410   e-140
ref|XP_002314612.1| predicted protein [Populus trichocarpa] gi|2...   410   e-140
ref|XP_003552026.1| PREDICTED: polygalacturonase At1g48100-like ...   410   e-139

>ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
            gi|297739064|emb|CBI28553.3| unnamed protein product
            [Vitis vinifera]
          Length = 505

 Score =  428 bits (1100), Expect(2) = e-146
 Identities = 197/241 (81%), Positives = 215/241 (89%)
 Frame = -2

Query: 1593 CHLKFDNCVGVSVYNMTVSSPGDSPNTDGIHLQNSKDVLIHTTNLSCGDDCISIQTGCSN 1414
            CHLKFDNC+GVSVY M+VSSPGDS NTDGIHLQNSKDVLIH TNL+CGDDC+SIQTGCSN
Sbjct: 265  CHLKFDNCMGVSVYEMSVSSPGDSVNTDGIHLQNSKDVLIHATNLACGDDCVSIQTGCSN 324

Query: 1413 VYVHNVNCXXXXXXXXXXXGKDNTKACVSNITIRDIIMHNTMNGVRIKTWQGGSGSVQGV 1234
            VY+HNVNC           G+D TKACVSNIT+RDIIMHNTMNGVRIKTWQGGSGSVQGV
Sbjct: 325  VYIHNVNCGPGHGISIGGLGRDGTKACVSNITVRDIIMHNTMNGVRIKTWQGGSGSVQGV 384

Query: 1233 LFSNIQVSEVQFPIIIDQFYCDKSQCKNQTTAVALSGITYEKIRGTYTVRPVHFACSDSL 1054
            LFSNIQVSEV+ PI+IDQFYCDK +CKNQT+AVALSGITYEKI+GTYTV+PVHFACSD+L
Sbjct: 385  LFSNIQVSEVELPIVIDQFYCDKGKCKNQTSAVALSGITYEKIKGTYTVKPVHFACSDNL 444

Query: 1053 PCTDVTLNAIELKPLQERYHMYDPFCWHTFGELYSETVPPIDCIEIGKPHNNRIQVDHDV 874
            PC DVTL  IELKPLQERYHMYDPFCW TFGEL + TVPPIDC++IGKP +NRIQ DHD 
Sbjct: 445  PCMDVTLTGIELKPLQERYHMYDPFCWQTFGELTTPTVPPIDCLQIGKPSSNRIQSDHDS 504

Query: 873  C 871
            C
Sbjct: 505  C 505



 Score =  118 bits (295), Expect(2) = e-146
 Identities = 57/96 (59%), Positives = 67/96 (69%)
 Frame = -1

Query: 1960 QLDGTIIAPTNFKAFGSGLYQWLLFTKLVGITVQGKGIIDGRGSIWWQXXXXXXXXXXXX 1781
            QLDGTIIAPTN KA+GSGL  W+ FTKL GIT++G G+IDG+GS+WWQ            
Sbjct: 151  QLDGTIIAPTNAKAWGSGLLWWIEFTKLRGITIRGNGVIDGKGSVWWQDSPFDDPVDDEA 210

Query: 1780 XXXXXLNNTVEENLPIPVSSSLGGKMPSIKPTALRF 1673
                 LN T +EN PIP++S LG KMPS KPTALRF
Sbjct: 211  KLIIPLNRTAKENSPIPINSKLGSKMPSTKPTALRF 246


>emb|CAN65317.1| hypothetical protein VITISV_006410 [Vitis vinifera]
          Length = 388

 Score =  428 bits (1100), Expect(2) = e-146
 Identities = 197/241 (81%), Positives = 215/241 (89%)
 Frame = -2

Query: 1593 CHLKFDNCVGVSVYNMTVSSPGDSPNTDGIHLQNSKDVLIHTTNLSCGDDCISIQTGCSN 1414
            CHLKFDNC+GVSVY M+VSSPGDS NTDGIHLQNSKDVLIH TNL+CGDDC+SIQTGCSN
Sbjct: 148  CHLKFDNCMGVSVYEMSVSSPGDSVNTDGIHLQNSKDVLIHATNLACGDDCVSIQTGCSN 207

Query: 1413 VYVHNVNCXXXXXXXXXXXGKDNTKACVSNITIRDIIMHNTMNGVRIKTWQGGSGSVQGV 1234
            VY+HNVNC           G+D TKACVSNIT+RDIIMHNTMNGVRIKTWQGGSGSVQGV
Sbjct: 208  VYIHNVNCGPGHGISIGGLGRDGTKACVSNITVRDIIMHNTMNGVRIKTWQGGSGSVQGV 267

Query: 1233 LFSNIQVSEVQFPIIIDQFYCDKSQCKNQTTAVALSGITYEKIRGTYTVRPVHFACSDSL 1054
            LFSNIQVSEV+ PI+IDQFYCDK +CKNQT+AVALSGITYEKI+GTYTV+PVHFACSD+L
Sbjct: 268  LFSNIQVSEVELPIVIDQFYCDKGKCKNQTSAVALSGITYEKIKGTYTVKPVHFACSDNL 327

Query: 1053 PCTDVTLNAIELKPLQERYHMYDPFCWHTFGELYSETVPPIDCIEIGKPHNNRIQVDHDV 874
            PC DVTL  IELKPLQERYHMYDPFCW TFGEL + TVPPIDC++IGKP +NRIQ DHD 
Sbjct: 328  PCMDVTLTGIELKPLQERYHMYDPFCWQTFGELTTPTVPPIDCLQIGKPSSNRIQSDHDS 387

Query: 873  C 871
            C
Sbjct: 388  C 388



 Score =  118 bits (295), Expect(2) = e-146
 Identities = 57/96 (59%), Positives = 67/96 (69%)
 Frame = -1

Query: 1960 QLDGTIIAPTNFKAFGSGLYQWLLFTKLVGITVQGKGIIDGRGSIWWQXXXXXXXXXXXX 1781
            QLDGTIIAPTN KA+GSGL  W+ FTKL GIT++G G+IDG+GS+WWQ            
Sbjct: 34   QLDGTIIAPTNAKAWGSGLLWWIEFTKLRGITIRGNGVIDGKGSVWWQDSPFDDPVDDEA 93

Query: 1780 XXXXXLNNTVEENLPIPVSSSLGGKMPSIKPTALRF 1673
                 LN T +EN PIP++S LG KMPS KPTALRF
Sbjct: 94   KLIIPLNRTAKENSPIPINSKLGSKMPSTKPTALRF 129


>gb|ABK95830.1| unknown [Populus trichocarpa]
          Length = 516

 Score =  410 bits (1053), Expect(2) = e-140
 Identities = 186/241 (77%), Positives = 211/241 (87%)
 Frame = -2

Query: 1593 CHLKFDNCVGVSVYNMTVSSPGDSPNTDGIHLQNSKDVLIHTTNLSCGDDCISIQTGCSN 1414
            CHLKFDNC+GV V++M  SSPGDSPNTDGIHLQNSKDVLIH+T+L+CGDDC+SIQTGCSN
Sbjct: 276  CHLKFDNCIGVVVHDMRTSSPGDSPNTDGIHLQNSKDVLIHSTDLACGDDCVSIQTGCSN 335

Query: 1413 VYVHNVNCXXXXXXXXXXXGKDNTKACVSNITIRDIIMHNTMNGVRIKTWQGGSGSVQGV 1234
            VY+HNVNC           GKDNTKACVSNIT+RD+++H TM GVRIKTWQGGSGSVQGV
Sbjct: 336  VYIHNVNCGPGHGISIGGLGKDNTKACVSNITVRDVVLHGTMTGVRIKTWQGGSGSVQGV 395

Query: 1233 LFSNIQVSEVQFPIIIDQFYCDKSQCKNQTTAVALSGITYEKIRGTYTVRPVHFACSDSL 1054
            LFSNIQVSEVQ PI+IDQFYCDKS CKNQT+AVALSGITYEKIRGTYTV+PVHFACSD+L
Sbjct: 396  LFSNIQVSEVQLPIVIDQFYCDKSICKNQTSAVALSGITYEKIRGTYTVKPVHFACSDAL 455

Query: 1053 PCTDVTLNAIELKPLQERYHMYDPFCWHTFGELYSETVPPIDCIEIGKPHNNRIQVDHDV 874
            PC DV+L  IEL+PL+E+YH+YDPFCW TFGEL + T PPI C++IGKP +NR Q DHD 
Sbjct: 456  PCMDVSLTTIELQPLKEQYHLYDPFCWQTFGELNTPTKPPISCLQIGKPSSNRPQSDHDT 515

Query: 873  C 871
            C
Sbjct: 516  C 516



 Score =  119 bits (297), Expect(2) = e-140
 Identities = 57/96 (59%), Positives = 67/96 (69%)
 Frame = -1

Query: 1960 QLDGTIIAPTNFKAFGSGLYQWLLFTKLVGITVQGKGIIDGRGSIWWQXXXXXXXXXXXX 1781
            QLDGTIIAPTN   +G GL+QWL FTKLVGIT+QG+G IDG GS+WWQ            
Sbjct: 162  QLDGTIIAPTNSNVWGRGLFQWLEFTKLVGITIQGEGTIDGSGSVWWQDYPFEDPIDNES 221

Query: 1780 XXXXXLNNTVEENLPIPVSSSLGGKMPSIKPTALRF 1673
                 LNNT +++ P+P+ S L GKMPSIKPTALRF
Sbjct: 222  EFIVPLNNTAQQHPPMPIRSELSGKMPSIKPTALRF 257


>ref|XP_002314612.1| predicted protein [Populus trichocarpa] gi|222863652|gb|EEF00783.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  410 bits (1053), Expect(2) = e-140
 Identities = 186/241 (77%), Positives = 211/241 (87%)
 Frame = -2

Query: 1593 CHLKFDNCVGVSVYNMTVSSPGDSPNTDGIHLQNSKDVLIHTTNLSCGDDCISIQTGCSN 1414
            CHLKFDNC+GV V++M  SSPGDSPNTDGIHLQNSKDVLIH+T+L+CGDDC+SIQTGCSN
Sbjct: 142  CHLKFDNCIGVVVHDMRTSSPGDSPNTDGIHLQNSKDVLIHSTDLACGDDCVSIQTGCSN 201

Query: 1413 VYVHNVNCXXXXXXXXXXXGKDNTKACVSNITIRDIIMHNTMNGVRIKTWQGGSGSVQGV 1234
            VY+HNVNC           GKDNTKACVSNIT+RD+++H TM GVRIKTWQGGSGSVQGV
Sbjct: 202  VYIHNVNCGPGHGISIGGLGKDNTKACVSNITVRDVVLHGTMTGVRIKTWQGGSGSVQGV 261

Query: 1233 LFSNIQVSEVQFPIIIDQFYCDKSQCKNQTTAVALSGITYEKIRGTYTVRPVHFACSDSL 1054
            LFSNIQVSEVQ PI+IDQFYCDKS CKNQT+AVALSGITYEKIRGTYTV+PVHFACSD+L
Sbjct: 262  LFSNIQVSEVQLPIVIDQFYCDKSICKNQTSAVALSGITYEKIRGTYTVKPVHFACSDAL 321

Query: 1053 PCTDVTLNAIELKPLQERYHMYDPFCWHTFGELYSETVPPIDCIEIGKPHNNRIQVDHDV 874
            PC DV+L  IEL+PL+E+YH+YDPFCW TFGEL + T PPI C++IGKP +NR Q DHD 
Sbjct: 322  PCMDVSLTTIELQPLKEQYHLYDPFCWQTFGELNTPTKPPISCLQIGKPSSNRPQSDHDT 381

Query: 873  C 871
            C
Sbjct: 382  C 382



 Score =  119 bits (297), Expect(2) = e-140
 Identities = 57/96 (59%), Positives = 67/96 (69%)
 Frame = -1

Query: 1960 QLDGTIIAPTNFKAFGSGLYQWLLFTKLVGITVQGKGIIDGRGSIWWQXXXXXXXXXXXX 1781
            QLDGTIIAPTN   +G GL+QWL FTKLVGIT+QG+G IDG GS+WWQ            
Sbjct: 28   QLDGTIIAPTNSNVWGRGLFQWLEFTKLVGITIQGEGTIDGSGSVWWQDYPFEDPIDNES 87

Query: 1780 XXXXXLNNTVEENLPIPVSSSLGGKMPSIKPTALRF 1673
                 LNNT +++ P+P+ S L GKMPSIKPTALRF
Sbjct: 88   EFIVPLNNTAQQHPPMPIRSELSGKMPSIKPTALRF 123


>ref|XP_003552026.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
          Length = 538

 Score =  410 bits (1053), Expect(2) = e-139
 Identities = 182/241 (75%), Positives = 216/241 (89%)
 Frame = -2

Query: 1593 CHLKFDNCVGVSVYNMTVSSPGDSPNTDGIHLQNSKDVLIHTTNLSCGDDCISIQTGCSN 1414
            CHLKFDNC GV V+++T+SSPGDSPNTDGIHLQNSKDVLI++++++CGDDCISIQTGCSN
Sbjct: 298  CHLKFDNCNGVMVHDVTISSPGDSPNTDGIHLQNSKDVLIYSSSMACGDDCISIQTGCSN 357

Query: 1413 VYVHNVNCXXXXXXXXXXXGKDNTKACVSNITIRDIIMHNTMNGVRIKTWQGGSGSVQGV 1234
            +YVHNVNC           GKDNT+ACVSNIT+RD+ MHNTMNGVRIKTWQGGSGSVQGV
Sbjct: 358  IYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNTMNGVRIKTWQGGSGSVQGV 417

Query: 1233 LFSNIQVSEVQFPIIIDQFYCDKSQCKNQTTAVALSGITYEKIRGTYTVRPVHFACSDSL 1054
            LFSNIQVSEV+ PI+IDQFYCDK  CKNQT+AV+L+GI YE+IRGTYTV+PVHFACSD+L
Sbjct: 418  LFSNIQVSEVELPIVIDQFYCDKRTCKNQTSAVSLAGINYERIRGTYTVKPVHFACSDNL 477

Query: 1053 PCTDVTLNAIELKPLQERYHMYDPFCWHTFGELYSETVPPIDCIEIGKPHNNRIQVDHDV 874
            PC DV+L ++ELKP+QE+YH+Y+PFCW T+GEL + TVPPIDC++IGKP NNRIQ DHD+
Sbjct: 478  PCVDVSLTSVELKPIQEQYHLYNPFCWQTYGELKTPTVPPIDCLQIGKPTNNRIQTDHDL 537

Query: 873  C 871
            C
Sbjct: 538  C 538



 Score =  115 bits (288), Expect(2) = e-139
 Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
 Frame = -1

Query: 1960 QLDGTIIAPTNFKAFGSGLYQWLLFTKLVGITVQGKGIIDGRGSIWWQXXXXXXXXXXXX 1781
            QLDGTI+APT+ KA+G GL QWL F+KLVGIT+QG GIIDGRGS+WWQ            
Sbjct: 183  QLDGTIVAPTSPKAWGKGLLQWLEFSKLVGITIQGNGIIDGRGSVWWQDNQYDDPIDDEE 242

Query: 1780 XXXXXLNNTV-EENLPIPVSSSLGGKMPSIKPTALRF 1673
                 LN+TV   + P+P+ S +GGKMPS+KPTALRF
Sbjct: 243  KLIVPLNHTVGSPSPPLPIQSEMGGKMPSVKPTALRF 279


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