BLASTX nr result

ID: Panax21_contig00019141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019141
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530377.1| protein dimerization, putative [Ricinus comm...   177   6e-43
ref|XP_002310902.1| predicted protein [Populus trichocarpa] gi|2...   161   4e-38
ref|XP_002269161.1| PREDICTED: uncharacterized protein LOC100264...   157   8e-37
ref|XP_002269962.2| PREDICTED: uncharacterized protein LOC100251...   129   2e-28
ref|NP_187909.1| hAT dimerization domain-containing protein [Ara...   127   1e-27

>ref|XP_002530377.1| protein dimerization, putative [Ricinus communis]
           gi|223530094|gb|EEF32010.1| protein dimerization,
           putative [Ricinus communis]
          Length = 698

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/127 (65%), Positives = 100/127 (78%)
 Frame = -2

Query: 382 LDLINEGDNQLLGYIYETLDQAKETIKEEFRNKKSQYMPFWEVIDNIWNNHLHSHLHSAG 203
           L LI E D   +G+IYET+DQAKETIKEEFRNKKSQY+PFWE+ID IW+ HLHS LH+AG
Sbjct: 447 LCLIIEADKPQVGFIYETMDQAKETIKEEFRNKKSQYVPFWEIIDEIWDTHLHSPLHAAG 506

Query: 202 YFLNPSLFYSTDFLPDLEVVSGLLCCIVRMAESTQVEDTITSQLVPYREAKGEFRHGSGI 23
           Y+LNPSLFYSTDF  D EV  GLLCCIVRM +  + +D I+ QL  YR A+G F+ GS I
Sbjct: 507 YYLNPSLFYSTDFYSDPEVSFGLLCCIVRMVQDPRTQDLISLQLDEYRHARGAFKEGSAI 566

Query: 22  TQRSNVS 2
            +R+N+S
Sbjct: 567 NKRTNIS 573


>ref|XP_002310902.1| predicted protein [Populus trichocarpa] gi|222853805|gb|EEE91352.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score =  161 bits (408), Expect = 4e-38
 Identities = 74/127 (58%), Positives = 93/127 (73%)
 Frame = -2

Query: 382 LDLINEGDNQLLGYIYETLDQAKETIKEEFRNKKSQYMPFWEVIDNIWNNHLHSHLHSAG 203
           L L+NEGD   +G+IYET+DQ KETIK+EF+NKKS Y PFW  ID+IW+  LHS LH+AG
Sbjct: 447 LCLVNEGDKPQVGFIYETMDQVKETIKKEFKNKKSDYTPFWTAIDDIWDTRLHSPLHAAG 506

Query: 202 YFLNPSLFYSTDFLPDLEVVSGLLCCIVRMAESTQVEDTITSQLVPYREAKGEFRHGSGI 23
           Y+LNP LFYS+DF  D EV  GLLCC+VRM    + +  IT QL  YR A+G F+ G  I
Sbjct: 507 YYLNPCLFYSSDFYSDPEVTFGLLCCVVRMVADQRTQLKITFQLDEYRHARGAFQEGKAI 566

Query: 22  TQRSNVS 2
            +R+N+S
Sbjct: 567 VKRTNIS 573


>ref|XP_002269161.1| PREDICTED: uncharacterized protein LOC100264734 [Vitis vinifera]
          Length = 714

 Score =  157 bits (397), Expect = 8e-37
 Identities = 74/126 (58%), Positives = 88/126 (69%)
 Frame = -2

Query: 382 LDLINEGDNQLLGYIYETLDQAKETIKEEFRNKKSQYMPFWEVIDNIWNNHLHSHLHSAG 203
           L  IN  D   +GYIY+T+DQAKE I +EF++KKSQYMPFWEVID IWN HL+S LHS G
Sbjct: 451 LSWINGSDKPQMGYIYDTMDQAKEAIAKEFKDKKSQYMPFWEVIDEIWNKHLYSPLHSTG 510

Query: 202 YFLNPSLFYSTDFLPDLEVVSGLLCCIVRMAESTQVEDTITSQLVPYREAKGEFRHGSGI 23
           Y+LNP  FYS+DF  D EV SG+LCCIVRM     V+D I  QL  Y   +G F  GS  
Sbjct: 511 YYLNPHFFYSSDFHCDAEVASGILCCIVRMVPDLHVQDVIGLQLDKYLWTEGAFAQGSAF 570

Query: 22  TQRSNV 5
            QR+N+
Sbjct: 571 DQRTNI 576


>ref|XP_002269962.2| PREDICTED: uncharacterized protein LOC100251332 [Vitis vinifera]
          Length = 709

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/124 (50%), Positives = 82/124 (66%)
 Frame = -2

Query: 376 LINEGDNQLLGYIYETLDQAKETIKEEFRNKKSQYMPFWEVIDNIWNNHLHSHLHSAGYF 197
           +I  G  Q+  YIYET+D  KE I EEF N +SQYMPFWE+ID IWNNHLHS LH+A   
Sbjct: 452 IIRGGKGQMC-YIYETMDAVKEDIAEEFENNESQYMPFWELIDEIWNNHLHSALHAAANH 510

Query: 196 LNPSLFYSTDFLPDLEVVSGLLCCIVRMAESTQVEDTITSQLVPYREAKGEFRHGSGITQ 17
           LNP++FYS D+  D EV  G+ CCI  M     +++ I  QL  Y++A+G+F  G   T+
Sbjct: 511 LNPAIFYSRDYNFDKEVFEGINCCIEHMVPDEHIQNEIWLQLEQYKDAEGDFGLGKA-TE 569

Query: 16  RSNV 5
           R N+
Sbjct: 570 RRNI 573


>ref|NP_187909.1| hAT dimerization domain-containing protein [Arabidopsis thaliana]
           gi|79313211|ref|NP_001030685.1| hAT dimerization
           domain-containing protein [Arabidopsis thaliana]
           gi|238479754|ref|NP_001154612.1| hAT dimerization
           domain-containing protein [Arabidopsis thaliana]
           gi|15795135|dbj|BAB02513.1| transposase-like protein
           [Arabidopsis thaliana] gi|28393338|gb|AAO42094.1|
           unknown protein [Arabidopsis thaliana]
           gi|28827476|gb|AAO50582.1| unknown protein [Arabidopsis
           thaliana] gi|222424407|dbj|BAH20159.1| AT3G13030
           [Arabidopsis thaliana] gi|332641757|gb|AEE75278.1| hAT
           dimerization domain-containing protein [Arabidopsis
           thaliana] gi|332641758|gb|AEE75279.1| hAT dimerization
           domain-containing protein [Arabidopsis thaliana]
           gi|332641759|gb|AEE75280.1| hAT dimerization
           domain-containing protein [Arabidopsis thaliana]
          Length = 544

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/125 (46%), Positives = 83/125 (66%)
 Frame = -2

Query: 376 LINEGDNQLLGYIYETLDQAKETIKEEFRNKKSQYMPFWEVIDNIWNNHLHSHLHSAGYF 197
           L +  +NQ LGY+Y+T+D  KE+I  EF +K   Y P W+VID++WN HLH+ LH+AGYF
Sbjct: 335 LFSTANNQHLGYVYDTMDSIKESIAREFNHKPQFYKPLWDVIDDVWNKHLHNPLHAAGYF 394

Query: 196 LNPSLFYSTDFLPDLEVVSGLLCCIVRMAESTQVEDTITSQLVPYREAKGEFRHGSGITQ 17
           LNP+ FYST+F  D+EVV+GL+  ++ M E   V+  I++Q+  YR  K  F   S   Q
Sbjct: 395 LNPTAFYSTNFHLDIEVVTGLISSLIHMVEDCHVQFKISTQIDMYRLGKDCFNEASQADQ 454

Query: 16  RSNVS 2
            + +S
Sbjct: 455 ITGIS 459


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