BLASTX nr result

ID: Panax21_contig00019075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019075
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317342.1| predicted protein [Populus trichocarpa] gi|2...    44   6e-09
ref|XP_002883246.1| hypothetical protein ARALYDRAFT_479572 [Arab...    45   2e-06
ref|XP_002529913.1| conserved hypothetical protein [Ricinus comm...    41   7e-06

>ref|XP_002317342.1| predicted protein [Populus trichocarpa] gi|222860407|gb|EEE97954.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score = 43.9 bits (102), Expect(2) = 6e-09
 Identities = 22/33 (66%), Positives = 26/33 (78%)
 Frame = +3

Query: 570 LLKSQAKPRVIYTSTKSEESLLSALQQNGMLFY 668
           L+K QAKP  IYTSTK EES LSALQ++G L +
Sbjct: 61  LVKYQAKPLNIYTSTKCEESFLSALQRSGTLLF 93



 Score = 43.1 bits (100), Expect(2) = 6e-09
 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +2

Query: 677 YTTLV-STVFAVQYLK*VGDTDGTSDYPTVKLMKSSIFCYEQA*HML 814
           +T L+   ++     K   DTDGT++ P VKL+KSSIF YEQA H L
Sbjct: 93  FTCLIYELIYMWNVFKFQSDTDGTTEAPMVKLVKSSIFSYEQAWHRL 139


>ref|XP_002883246.1| hypothetical protein ARALYDRAFT_479572 [Arabidopsis lyrata subsp.
           lyrata] gi|297329086|gb|EFH59505.1| hypothetical protein
           ARALYDRAFT_479572 [Arabidopsis lyrata subsp. lyrata]
          Length = 807

 Score = 45.1 bits (105), Expect(2) = 2e-06
 Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 6/46 (13%)
 Frame = +3

Query: 534 VHIIQVLLTDSG------LLKSQAKPRVIYTSTKSEESLLSALQQN 653
           +H+++V   D        ++K QAKP +IYTSTKSEES ++ALQQN
Sbjct: 36  LHVLEVWEEDCSDFTLINMVKYQAKPSIIYTSTKSEESFVAALQQN 81



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +2

Query: 737 DGTSDYPTVKLMKSSIFCYEQA*HML 814
           DGT +   VKL+KSS F YEQA H L
Sbjct: 82  DGTDETTMVKLVKSSTFSYEQAWHRL 107


>ref|XP_002529913.1| conserved hypothetical protein [Ricinus communis]
           gi|223530590|gb|EEF32467.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 351

 Score = 41.2 bits (95), Expect(2) = 7e-06
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = +2

Query: 734 TDGTSDYPTVKLMKSSIFCYEQA*HML 814
           +DGT++ PTVKL+KSSIF YEQA H L
Sbjct: 78  SDGTTEAPTVKLVKSSIFSYEQAWHRL 104



 Score = 35.4 bits (80), Expect(2) = 7e-06
 Identities = 16/28 (57%), Positives = 23/28 (82%)
 Frame = +3

Query: 570 LLKSQAKPRVIYTSTKSEESLLSALQQN 653
           L+K QA+P  IY S+KSEES ++ALQ++
Sbjct: 51  LVKYQAQPLTIYASSKSEESFINALQRS 78


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