BLASTX nr result

ID: Panax21_contig00019072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019072
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32700.3| unnamed protein product [Vitis vinifera]              206   1e-51
ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   206   1e-51
ref|XP_002520902.1| dead box ATP-dependent RNA helicase, putativ...   201   7e-50
ref|XP_004165148.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   200   1e-49
ref|XP_004137811.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   199   2e-49

>emb|CBI32700.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  206 bits (525), Expect = 1e-51
 Identities = 99/121 (81%), Positives = 111/121 (91%)
 Frame = -1

Query: 367 ISRTYQRDALLRKKHNIHISGTNVPSPLQNFAELRSRYKCRSYLVRNLAELGFEEPTPIQ 188
           ++R  +RDALLRKKH IHISG NVPSPL+NF+EL SRY C SYL+ NLAELGF+EPTPIQ
Sbjct: 95  LNRQIERDALLRKKHKIHISGNNVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQ 154

Query: 187 RQAIPVILSGRECFACAPTGSGKTLAFVCPMLMRLKRSSRDGIRALILLPTRELAAQTAR 8
           RQAIPV+LSGRECFACAPTGSGKTLAFVCPMLM+LK +S+DGIRA+IL PTRELAAQTAR
Sbjct: 155 RQAIPVLLSGRECFACAPTGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTAR 214

Query: 7   E 5
           E
Sbjct: 215 E 215


>ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57 [Vitis vinifera]
          Length = 524

 Score =  206 bits (525), Expect = 1e-51
 Identities = 99/121 (81%), Positives = 111/121 (91%)
 Frame = -1

Query: 367 ISRTYQRDALLRKKHNIHISGTNVPSPLQNFAELRSRYKCRSYLVRNLAELGFEEPTPIQ 188
           ++R  +RDALLRKKH IHISG NVPSPL+NF+EL SRY C SYL+ NLAELGF+EPTPIQ
Sbjct: 96  LNRQIERDALLRKKHKIHISGNNVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQ 155

Query: 187 RQAIPVILSGRECFACAPTGSGKTLAFVCPMLMRLKRSSRDGIRALILLPTRELAAQTAR 8
           RQAIPV+LSGRECFACAPTGSGKTLAFVCPMLM+LK +S+DGIRA+IL PTRELAAQTAR
Sbjct: 156 RQAIPVLLSGRECFACAPTGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTAR 215

Query: 7   E 5
           E
Sbjct: 216 E 216


>ref|XP_002520902.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223540033|gb|EEF41611.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 535

 Score =  201 bits (510), Expect = 7e-50
 Identities = 94/122 (77%), Positives = 109/122 (89%)
 Frame = -1

Query: 367 ISRTYQRDALLRKKHNIHISGTNVPSPLQNFAELRSRYKCRSYLVRNLAELGFEEPTPIQ 188
           +++  +RDALLRK  +IH+SG N+PSPLQNF+EL SRY C SYL+ NL ELGF+EPTPIQ
Sbjct: 107 LNKQIERDALLRKHFHIHVSGNNIPSPLQNFSELSSRYGCESYLLHNLVELGFKEPTPIQ 166

Query: 187 RQAIPVILSGRECFACAPTGSGKTLAFVCPMLMRLKRSSRDGIRALILLPTRELAAQTAR 8
           RQAIPV+LSGRECFACAPTGSGKTLAFVCPMLM+LK SS+DGIRA+IL PTRELA+QT R
Sbjct: 167 RQAIPVLLSGRECFACAPTGSGKTLAFVCPMLMKLKHSSKDGIRAVILCPTRELASQTTR 226

Query: 7   EC 2
           EC
Sbjct: 227 EC 228


>ref|XP_004165148.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like, partial
           [Cucumis sativus]
          Length = 441

 Score =  200 bits (508), Expect = 1e-49
 Identities = 96/120 (80%), Positives = 106/120 (88%)
 Frame = -1

Query: 361 RTYQRDALLRKKHNIHISGTNVPSPLQNFAELRSRYKCRSYLVRNLAELGFEEPTPIQRQ 182
           R  +RDAL RKK+NIHISG NVPSPLQNF EL +RY C SYL+ NL ELGF+EPTPIQRQ
Sbjct: 134 RKLERDALFRKKYNIHISGNNVPSPLQNFGELSTRYDCDSYLLHNLVELGFKEPTPIQRQ 193

Query: 181 AIPVILSGRECFACAPTGSGKTLAFVCPMLMRLKRSSRDGIRALILLPTRELAAQTAREC 2
           AIPV+LSGRECFACAPTGSGKTLAFVCPMLMRLK  S++GIRA+IL PTRELA+QT REC
Sbjct: 194 AIPVLLSGRECFACAPTGSGKTLAFVCPMLMRLKDPSKEGIRAVILCPTRELASQTIREC 253


>ref|XP_004137811.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Cucumis
           sativus]
          Length = 616

 Score =  199 bits (507), Expect = 2e-49
 Identities = 95/120 (79%), Positives = 106/120 (88%)
 Frame = -1

Query: 361 RTYQRDALLRKKHNIHISGTNVPSPLQNFAELRSRYKCRSYLVRNLAELGFEEPTPIQRQ 182
           R  +RDAL RKK+NIH+SG NVPSPLQNF EL +RY C SYL+ NL ELGF+EPTPIQRQ
Sbjct: 108 RKLERDALFRKKYNIHVSGNNVPSPLQNFGELSTRYDCDSYLLHNLVELGFKEPTPIQRQ 167

Query: 181 AIPVILSGRECFACAPTGSGKTLAFVCPMLMRLKRSSRDGIRALILLPTRELAAQTAREC 2
           AIPV+LSGRECFACAPTGSGKTLAFVCPMLMRLK  S++GIRA+IL PTRELA+QT REC
Sbjct: 168 AIPVLLSGRECFACAPTGSGKTLAFVCPMLMRLKDPSKEGIRAVILCPTRELASQTIREC 227


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