BLASTX nr result

ID: Panax21_contig00019070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019070
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262673.1| PREDICTED: glutaredoxin-C9-like [Vitis vinif...   165   9e-39
ref|XP_002310416.1| glutaredoxin [Populus trichocarpa] gi|222853...   153   3e-35
gb|ABK96346.1| unknown [Populus trichocarpa x Populus deltoides]      152   5e-35
ref|XP_002331955.1| glutaredoxin C9 [Populus trichocarpa] gi|222...   152   8e-35
ref|XP_002327897.1| glutaredoxin [Populus trichocarpa] gi|222837...   150   2e-34

>ref|XP_002262673.1| PREDICTED: glutaredoxin-C9-like [Vitis vinifera]
          Length = 141

 Score =  165 bits (417), Expect = 9e-39
 Identities = 87/143 (60%), Positives = 104/143 (72%), Gaps = 6/143 (4%)
 Frame = +3

Query: 132 MQEAIPYKTWTSFS----MNHKAKISHDHSIIKGAKRDDMKKMVSENAVIVFGARGCCMT 299
           MQEA+PYKTW        +N      H+  ++ G    ++  MVSENAVIVFG RGCCMT
Sbjct: 1   MQEALPYKTWLPIPREPRINTPTTPLHNQLLLPGTT--NITNMVSENAVIVFGRRGCCMT 58

Query: 300 HVVNRLLQGQGVNPAVYEIDQEDENHVIGQLQMIDAGKNDQ--LQFPAVFIGGRLFGGLD 473
           HVV RLL G GVNPAV E+++EDE  V+ +L M+ AG+  Q  +QFPAVFIGGRLFGGLD
Sbjct: 59  HVVKRLLLGLGVNPAVCEVNEEDEIGVLDELGMVGAGEGKQGAVQFPAVFIGGRLFGGLD 118

Query: 474 RIMATHITGELIPILKQARALWL 542
           R+MA HITGEL+PILKQA ALWL
Sbjct: 119 RVMAAHITGELVPILKQAGALWL 141


>ref|XP_002310416.1| glutaredoxin [Populus trichocarpa] gi|222853319|gb|EEE90866.1|
           glutaredoxin [Populus trichocarpa]
          Length = 153

 Score =  153 bits (387), Expect = 3e-35
 Identities = 84/155 (54%), Positives = 108/155 (69%), Gaps = 18/155 (11%)
 Frame = +3

Query: 132 MQEAIPYKTWTSFSMNHKAKIS-------HDHS-------IIKGAKRDDMKKMVSENAVI 269
           MQ+AIPYK+W     N+K  IS       H++        ++KG+   +M KMV ENA+I
Sbjct: 1   MQQAIPYKSWPPLYTNNKPLISPFQLIARHNNGGVVATQEVLKGS--GNMSKMVQENAII 58

Query: 270 VFGARGCCMTHVVNRLLQGQGVNPAVYEIDQEDENHVIGQLQMI--DAGKND--QLQFPA 437
           VF  RGCCM+ V  RLL G GVNPAVYEID+ DE  V+ +L+MI  D GK    ++QFPA
Sbjct: 59  VFARRGCCMSLVAKRLLLGLGVNPAVYEIDEADEISVLEELEMICNDGGKGSKKKVQFPA 118

Query: 438 VFIGGRLFGGLDRIMATHITGELIPILKQARALWL 542
           +FIGG+LFGGLD++MA HI+GEL+PILK+A ALWL
Sbjct: 119 LFIGGKLFGGLDKLMAAHISGELVPILKEAGALWL 153


>gb|ABK96346.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 154

 Score =  152 bits (385), Expect = 5e-35
 Identities = 84/156 (53%), Positives = 107/156 (68%), Gaps = 19/156 (12%)
 Frame = +3

Query: 132 MQEAIPYKTWTSFSMNHKAKIS--------HDHS-------IIKGAKRDDMKKMVSENAV 266
           MQ+AIPYK+W     N+K  IS        H +        ++KG+   +M KMV ENA+
Sbjct: 1   MQQAIPYKSWPPLYTNNKPLISPFQLIAGRHSNGGVVATQEVLKGS--GNMSKMVQENAI 58

Query: 267 IVFGARGCCMTHVVNRLLQGQGVNPAVYEIDQEDENHVIGQLQMI--DAGKND--QLQFP 434
           IVF  RGCCM+ V  RLL G GVNPAVYEID+ DE  V+ +L+MI  D GK    ++QFP
Sbjct: 59  IVFARRGCCMSLVAKRLLLGLGVNPAVYEIDEADEISVLEELEMICNDGGKGSKKKVQFP 118

Query: 435 AVFIGGRLFGGLDRIMATHITGELIPILKQARALWL 542
           A+FIGG+LFGGLD++MA HI+GEL+PILK+A ALWL
Sbjct: 119 ALFIGGKLFGGLDKLMAAHISGELVPILKEAGALWL 154


>ref|XP_002331955.1| glutaredoxin C9 [Populus trichocarpa] gi|222874732|gb|EEF11863.1|
           glutaredoxin C9 [Populus trichocarpa]
          Length = 152

 Score =  152 bits (383), Expect = 8e-35
 Identities = 75/152 (49%), Positives = 107/152 (70%), Gaps = 15/152 (9%)
 Frame = +3

Query: 132 MQEAIPYKTWTSFSMNHKAKI-SHDHS----------IIKGAKRDDMKKMVSENAVIVFG 278
           MQEAIP++ ++  + +   ++ + DH           ++     + ++K+V EN+VIVFG
Sbjct: 1   MQEAIPFRAYSPATTSGNRRLPARDHGGANTSSGHVLVVTNGHENHVQKLVLENSVIVFG 60

Query: 279 ARGCCMTHVVNRLLQGQGVNPAVYEIDQEDENHVIGQLQMIDAGKN----DQLQFPAVFI 446
            RGCCM HVV RLL G GVNP V+E+++++E+ VI +L MID+ +     DQ+QFP VF+
Sbjct: 61  KRGCCMCHVVKRLLLGLGVNPPVFEVEEKEEDDVIKELSMIDSDRGGEGVDQVQFPVVFV 120

Query: 447 GGRLFGGLDRIMATHITGELIPILKQARALWL 542
           GG+LFGGL+R+MATHITGEL+PILK A ALWL
Sbjct: 121 GGKLFGGLERVMATHITGELVPILKDAGALWL 152


>ref|XP_002327897.1| glutaredoxin [Populus trichocarpa] gi|222837306|gb|EEE75685.1|
           glutaredoxin [Populus trichocarpa]
          Length = 155

 Score =  150 bits (380), Expect = 2e-34
 Identities = 83/157 (52%), Positives = 108/157 (68%), Gaps = 20/157 (12%)
 Frame = +3

Query: 132 MQEAIPYKTWTSFSMNHKAKISHD-----HS---------IIKGAKRDDMKKMVSENAVI 269
           MQ+AIPYK+W     N+K  IS       HS         ++KG++  ++ +MV ENA+I
Sbjct: 1   MQQAIPYKSWLPLYTNNKPLISPSQLISHHSNGGVVAAQEVLKGSR--NISEMVQENAII 58

Query: 270 VFGARGCCMTHVVNRLLQGQGVNPAVYEIDQEDENHVIGQLQMID---AGKND---QLQF 431
           VF  RGCCM+HV  RLL G GVNPAVYEID+ DE  V+ +L+MI     GK +   ++QF
Sbjct: 59  VFARRGCCMSHVAKRLLLGLGVNPAVYEIDEADEISVLEELEMIGNDIGGKGNNKKKVQF 118

Query: 432 PAVFIGGRLFGGLDRIMATHITGELIPILKQARALWL 542
           PA+ IGG+LFGGLD +MATHI+GEL+PILK+A ALWL
Sbjct: 119 PALVIGGKLFGGLDTLMATHISGELVPILKEAGALWL 155


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