BLASTX nr result

ID: Panax21_contig00019067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019067
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326176.1| predicted protein [Populus trichocarpa] gi|2...   188   5e-46
ref|XP_002322873.1| predicted protein [Populus trichocarpa] gi|2...   184   7e-45
ref|XP_002519546.1| nucleotide binding protein, putative [Ricinu...   181   4e-44
ref|XP_003521386.1| PREDICTED: WD repeat-containing protein 20-l...   180   1e-43
ref|XP_003554372.1| PREDICTED: WD repeat-containing protein 20-l...   176   2e-42

>ref|XP_002326176.1| predicted protein [Populus trichocarpa] gi|222833369|gb|EEE71846.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  188 bits (477), Expect = 5e-46
 Identities = 88/111 (79%), Positives = 99/111 (89%)
 Frame = -2

Query: 527 PPAGSPTFSTGSQSSHWDSTCPVGTLQPAPSMRDVPKLSPLIAHRVHTEPLSGLLFTQES 348
           PP GSPTFSTGSQSSHWDS  PVGTLQPAPSMRDVPKLSP++AHRVHTEPLSGL+F QES
Sbjct: 438 PPGGSPTFSTGSQSSHWDSVIPVGTLQPAPSMRDVPKLSPVLAHRVHTEPLSGLVFRQES 497

Query: 347 VLTVCREGHTKIWMRPGFTENQSTKSDTLLGTSLIEKPVLTGKVGNSAYRQ 195
           VLTVCREGH KIWMRPG +E+QS  S+T+L TSL EKP+L+ K G+SAY+Q
Sbjct: 498 VLTVCREGHIKIWMRPGTSESQSGNSETILSTSLKEKPLLSSKTGSSAYKQ 548


>ref|XP_002322873.1| predicted protein [Populus trichocarpa] gi|222867503|gb|EEF04634.1|
           predicted protein [Populus trichocarpa]
          Length = 560

 Score =  184 bits (467), Expect = 7e-45
 Identities = 85/111 (76%), Positives = 97/111 (87%)
 Frame = -2

Query: 527 PPAGSPTFSTGSQSSHWDSTCPVGTLQPAPSMRDVPKLSPLIAHRVHTEPLSGLLFTQES 348
           PP GSPTFSTGSQSSHWDS  PVGTLQPAPSMRDVPKLSP++AHRVHTEPLSGL+FTQE 
Sbjct: 450 PPGGSPTFSTGSQSSHWDSVIPVGTLQPAPSMRDVPKLSPVVAHRVHTEPLSGLVFTQEC 509

Query: 347 VLTVCREGHTKIWMRPGFTENQSTKSDTLLGTSLIEKPVLTGKVGNSAYRQ 195
           VLTVCREGH KIWMRPG  ++QS  S+T+  TSL EKP+L+ K+G+S Y+Q
Sbjct: 510 VLTVCREGHVKIWMRPGALDSQSGNSETIPSTSLKEKPLLSSKIGSSTYKQ 560


>ref|XP_002519546.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223541409|gb|EEF42960.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 539

 Score =  181 bits (460), Expect = 4e-44
 Identities = 83/111 (74%), Positives = 98/111 (88%)
 Frame = -2

Query: 527 PPAGSPTFSTGSQSSHWDSTCPVGTLQPAPSMRDVPKLSPLIAHRVHTEPLSGLLFTQES 348
           PP GSPTFSTGSQSSHWD+  PVGTLQPAPSMRDVPKLSP+++HRVHTEPL GLLFTQES
Sbjct: 429 PPGGSPTFSTGSQSSHWDNVVPVGTLQPAPSMRDVPKLSPVVSHRVHTEPLFGLLFTQES 488

Query: 347 VLTVCREGHTKIWMRPGFTENQSTKSDTLLGTSLIEKPVLTGKVGNSAYRQ 195
           VLTVCREGH KIWMRPG  E+Q+  S+T+L +SL +KP+L+ K G+S+Y+Q
Sbjct: 489 VLTVCREGHIKIWMRPGTAESQTGNSETVLSSSLKDKPLLSSKTGSSSYKQ 539


>ref|XP_003521386.1| PREDICTED: WD repeat-containing protein 20-like [Glycine max]
          Length = 550

 Score =  180 bits (457), Expect = 1e-43
 Identities = 84/112 (75%), Positives = 97/112 (86%), Gaps = 1/112 (0%)
 Frame = -2

Query: 527 PPAGSPTFSTGSQSSHWDSTCPVGTLQPAPSMRDVPKLSPLIAHRVHTEPLSGLLFTQES 348
           PP GSPT+STGSQSSHWD+  P+GTLQPAPSMRDVPK+SPL+AHRVHTEPLSGL+FTQES
Sbjct: 439 PPGGSPTYSTGSQSSHWDNVVPLGTLQPAPSMRDVPKISPLVAHRVHTEPLSGLIFTQES 498

Query: 347 VLTVCREGHTKIWMRPGFTENQSTKSDTLLGTSLIEKPVLTGKV-GNSAYRQ 195
           VLT CREGH KIWMRPG  E+QS+ S+ LL TSL EKP L+ K+  NS+Y+Q
Sbjct: 499 VLTACREGHIKIWMRPGVAESQSSNSENLLATSLKEKPSLSSKISSNSSYKQ 550


>ref|XP_003554372.1| PREDICTED: WD repeat-containing protein 20-like [Glycine max]
          Length = 550

 Score =  176 bits (446), Expect = 2e-42
 Identities = 82/112 (73%), Positives = 96/112 (85%), Gaps = 1/112 (0%)
 Frame = -2

Query: 527 PPAGSPTFSTGSQSSHWDSTCPVGTLQPAPSMRDVPKLSPLIAHRVHTEPLSGLLFTQES 348
           PP GSPT+STGSQSSHWD+  P+GTLQPAPSM DVPK+SPL+AHRVHTEPLSGL+FTQES
Sbjct: 439 PPGGSPTYSTGSQSSHWDNVVPLGTLQPAPSMLDVPKISPLVAHRVHTEPLSGLIFTQES 498

Query: 347 VLTVCREGHTKIWMRPGFTENQSTKSDTLLGTSLIEKPVLTGKV-GNSAYRQ 195
           VLT CREGH KIWMRPG  E+QS+ S+ LL T+L EKP L+ K+  NS+Y+Q
Sbjct: 499 VLTACREGHIKIWMRPGVAESQSSTSENLLATNLKEKPSLSSKISSNSSYKQ 550


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