BLASTX nr result

ID: Panax21_contig00019058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019058
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [V...   338   4e-91
ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [V...   338   4e-91
ref|XP_002285341.2| PREDICTED: topless-related protein 4-like is...   338   4e-91
ref|XP_002329020.1| predicted protein [Populus trichocarpa] gi|2...   334   6e-90
dbj|BAB02318.1| unnamed protein product [Arabidopsis thaliana]        333   1e-89

>ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [Vitis vinifera]
          Length = 1123

 Score =  338 bits (866), Expect = 4e-91
 Identities = 164/185 (88%), Positives = 173/185 (93%)
 Frame = +2

Query: 2   GFTKVDDNRYSMKIFFEIRKQKYLEALDKGDYGNAVEVLRQDLKVFSSFNEELFKEITLL 181
           GFTKVDDNRYSMKIFFEIRKQKYLEALDK D   AVE+L +DLKVFS+FNEELFKEIT L
Sbjct: 59  GFTKVDDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEELFKEITQL 118

Query: 182 LTLPNFRENEQLSKYGDTKSARGIMLVELKKLIEANPLFRDKLQFPSLKNSRLRTLINQS 361
           LTL NFR+NEQLSKYGDTKSARGIML ELKKLIEANPLFRDKLQFPSLKNSRLRTLINQS
Sbjct: 119 LTLENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQS 178

Query: 362 LNWQHQLCKSPKSNPDIKTLFVDHTCGQPNGARAPSPVTNQLMGSMPKVTGFPPIGAHGP 541
           LNWQHQLCK+PK+NPDIKTLFVDHTCGQPNGARAPSPVTN LMG++PK  GFPP+ AHGP
Sbjct: 179 LNWQHQLCKNPKANPDIKTLFVDHTCGQPNGARAPSPVTNPLMGTVPKAGGFPPLSAHGP 238

Query: 542 FQPAP 556
           FQPAP
Sbjct: 239 FQPAP 243


>ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [Vitis vinifera]
          Length = 1123

 Score =  338 bits (866), Expect = 4e-91
 Identities = 164/185 (88%), Positives = 173/185 (93%)
 Frame = +2

Query: 2   GFTKVDDNRYSMKIFFEIRKQKYLEALDKGDYGNAVEVLRQDLKVFSSFNEELFKEITLL 181
           GFTKVDDNRYSMKIFFEIRKQKYLEALDK D   AVE+L +DLKVFS+FNEELFKEIT L
Sbjct: 59  GFTKVDDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEELFKEITQL 118

Query: 182 LTLPNFRENEQLSKYGDTKSARGIMLVELKKLIEANPLFRDKLQFPSLKNSRLRTLINQS 361
           LTL NFR+NEQLSKYGDTKSARGIML ELKKLIEANPLFRDKLQFPSLKNSRLRTLINQS
Sbjct: 119 LTLENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQS 178

Query: 362 LNWQHQLCKSPKSNPDIKTLFVDHTCGQPNGARAPSPVTNQLMGSMPKVTGFPPIGAHGP 541
           LNWQHQLCK+PK+NPDIKTLFVDHTCGQPNGARAPSPVTN LMG++PK  GFPP+ AHGP
Sbjct: 179 LNWQHQLCKNPKANPDIKTLFVDHTCGQPNGARAPSPVTNPLMGTVPKAGGFPPLSAHGP 238

Query: 542 FQPAP 556
           FQPAP
Sbjct: 239 FQPAP 243


>ref|XP_002285341.2| PREDICTED: topless-related protein 4-like isoform 1 [Vitis
           vinifera] gi|297738983|emb|CBI28228.3| unnamed protein
           product [Vitis vinifera]
          Length = 1133

 Score =  338 bits (866), Expect = 4e-91
 Identities = 164/185 (88%), Positives = 173/185 (93%)
 Frame = +2

Query: 2   GFTKVDDNRYSMKIFFEIRKQKYLEALDKGDYGNAVEVLRQDLKVFSSFNEELFKEITLL 181
           GFTKVDDNRYSMKIFFEIRKQKYLEALDK D   AVE+L +DLKVFS+FNEELFKEIT L
Sbjct: 59  GFTKVDDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEELFKEITQL 118

Query: 182 LTLPNFRENEQLSKYGDTKSARGIMLVELKKLIEANPLFRDKLQFPSLKNSRLRTLINQS 361
           LTL NFR+NEQLSKYGDTKSARGIML ELKKLIEANPLFRDKLQFPSLKNSRLRTLINQS
Sbjct: 119 LTLENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQS 178

Query: 362 LNWQHQLCKSPKSNPDIKTLFVDHTCGQPNGARAPSPVTNQLMGSMPKVTGFPPIGAHGP 541
           LNWQHQLCK+PK+NPDIKTLFVDHTCGQPNGARAPSPVTN LMG++PK  GFPP+ AHGP
Sbjct: 179 LNWQHQLCKNPKANPDIKTLFVDHTCGQPNGARAPSPVTNPLMGTVPKAGGFPPLSAHGP 238

Query: 542 FQPAP 556
           FQPAP
Sbjct: 239 FQPAP 243


>ref|XP_002329020.1| predicted protein [Populus trichocarpa] gi|222839691|gb|EEE78014.1|
           predicted protein [Populus trichocarpa]
          Length = 1153

 Score =  334 bits (856), Expect = 6e-90
 Identities = 162/185 (87%), Positives = 172/185 (92%)
 Frame = +2

Query: 2   GFTKVDDNRYSMKIFFEIRKQKYLEALDKGDYGNAVEVLRQDLKVFSSFNEELFKEITLL 181
           GFTKVDDNRYSMKIFFEIRKQKYLEALDK D   AVE+L +DLKVFS+FNEELFKEIT L
Sbjct: 59  GFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRSMAVEILVKDLKVFSTFNEELFKEITQL 118

Query: 182 LTLPNFRENEQLSKYGDTKSARGIMLVELKKLIEANPLFRDKLQFPSLKNSRLRTLINQS 361
           LTL NFRENEQLSKYGDTKSAR IMLVELKKLIEANPLFRDKLQFP+LKNSRLRTLINQS
Sbjct: 119 LTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQS 178

Query: 362 LNWQHQLCKSPKSNPDIKTLFVDHTCGQPNGARAPSPVTNQLMGSMPKVTGFPPIGAHGP 541
           LNWQHQLCK+P+SNPDIKTLFVDH+CGQPNGARAPSP  N L+GS+PK  GFPP+GAHGP
Sbjct: 179 LNWQHQLCKNPRSNPDIKTLFVDHSCGQPNGARAPSPANNPLLGSLPKAGGFPPLGAHGP 238

Query: 542 FQPAP 556
           FQPAP
Sbjct: 239 FQPAP 243


>dbj|BAB02318.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1128

 Score =  333 bits (854), Expect = 1e-89
 Identities = 160/185 (86%), Positives = 171/185 (92%)
 Frame = +2

Query: 2   GFTKVDDNRYSMKIFFEIRKQKYLEALDKGDYGNAVEVLRQDLKVFSSFNEELFKEITLL 181
           GFTKVDDNRYSMKIFFEIRKQKYLEALDK D+  AV++L ++LKVFS+FNEELFKEIT+L
Sbjct: 59  GFTKVDDNRYSMKIFFEIRKQKYLEALDKKDHAKAVDILVKELKVFSTFNEELFKEITML 118

Query: 182 LTLPNFRENEQLSKYGDTKSARGIMLVELKKLIEANPLFRDKLQFPSLKNSRLRTLINQS 361
           LTL NFRENEQLSKYGDTKSARGIML ELKKLIEANPLFRDKLQFPSLKNSRLRTLINQS
Sbjct: 119 LTLTNFRENEQLSKYGDTKSARGIMLGELKKLIEANPLFRDKLQFPSLKNSRLRTLINQS 178

Query: 362 LNWQHQLCKSPKSNPDIKTLFVDHTCGQPNGARAPSPVTNQLMGSMPKVTGFPPIGAHGP 541
           LNWQHQLCK+P+ NPDIKTLFVDHTCG PNGA  PSP TN LMGS+PKV GFPP+GAHGP
Sbjct: 179 LNWQHQLCKNPRPNPDIKTLFVDHTCGHPNGAHTPSPTTNHLMGSVPKVGGFPPLGAHGP 238

Query: 542 FQPAP 556
           FQP P
Sbjct: 239 FQPTP 243


Top