BLASTX nr result

ID: Panax21_contig00019056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019056
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274655.1| PREDICTED: uncharacterized protein LOC100258...    70   2e-10
emb|CAN73983.1| hypothetical protein VITISV_017985 [Vitis vinifera]    70   2e-10
ref|XP_002323389.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_004136512.1| PREDICTED: mediator of RNA polymerase II tra...    66   3e-09
ref|XP_003554665.1| PREDICTED: uncharacterized protein LOC100782...    64   1e-08

>ref|XP_002274655.1| PREDICTED: uncharacterized protein LOC100258667 [Vitis vinifera]
           gi|296085885|emb|CBI31209.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/46 (71%), Positives = 39/46 (84%)
 Frame = +3

Query: 6   GVVEDDAADKIDVIELLFPSVFRAVISLHPVGSVYPDDVAFFSPDE 143
           G++   AADK+ VIELLFPS+FRA+ISLHP GS+ PD VAFFSPDE
Sbjct: 256 GLLGAVAADKVAVIELLFPSIFRAIISLHPAGSIDPDAVAFFSPDE 301


>emb|CAN73983.1| hypothetical protein VITISV_017985 [Vitis vinifera]
          Length = 862

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/46 (71%), Positives = 39/46 (84%)
 Frame = +3

Query: 6   GVVEDDAADKIDVIELLFPSVFRAVISLHPVGSVYPDDVAFFSPDE 143
           G++   AADK+ VIELLFPS+FRA+ISLHP GS+ PD VAFFSPDE
Sbjct: 383 GLLGAVAADKVAVIELLFPSIFRAIISLHPAGSIDPDAVAFFSPDE 428


>ref|XP_002323389.1| predicted protein [Populus trichocarpa] gi|222868019|gb|EEF05150.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = +3

Query: 24  AADKIDVIELLFPSVFRAVISLHPVGSVYPDDVAFFSPDE 143
           A DKI VIEL FPSVFRA+ISLHP GS+ PD VAFFSPDE
Sbjct: 260 ATDKIAVIELFFPSVFRAIISLHPAGSIDPDAVAFFSPDE 299


>ref|XP_004136512.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           27-like [Cucumis sativus]
           gi|449515406|ref|XP_004164740.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 27-like [Cucumis
           sativus]
          Length = 421

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/46 (69%), Positives = 36/46 (78%)
 Frame = +3

Query: 6   GVVEDDAADKIDVIELLFPSVFRAVISLHPVGSVYPDDVAFFSPDE 143
           G +    ADK  VIEL+ PSVFRAV+SLHPVGSV PD +AFFSPDE
Sbjct: 258 GALGATPADKAGVIELIIPSVFRAVVSLHPVGSVEPDALAFFSPDE 303


>ref|XP_003554665.1| PREDICTED: uncharacterized protein LOC100782776 [Glycine max]
          Length = 418

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/46 (69%), Positives = 36/46 (78%)
 Frame = +3

Query: 6   GVVEDDAADKIDVIELLFPSVFRAVISLHPVGSVYPDDVAFFSPDE 143
           G V    A+K+ VIELLFP VFRAVISLHP GS+ PD VAFF+PDE
Sbjct: 258 GSVGTVPAEKVAVIELLFPCVFRAVISLHPAGSMDPDAVAFFAPDE 303


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