BLASTX nr result

ID: Panax21_contig00019052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019052
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|2...   225   3e-57
ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...   224   6e-57
emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]   224   6e-57
ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containi...   219   2e-55
ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   214   4e-54

>ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|222843153|gb|EEE80700.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  225 bits (573), Expect = 3e-57
 Identities = 113/147 (76%), Positives = 125/147 (85%)
 Frame = +2

Query: 2   VDLLGRAGELQEAYNLIESMPMKQDSVVWGALLGACSFHGNVELAEKAVESLFKLEPWNP 181
           VDLLGRAGELQEAY+L++SMPMK DSV+WG LLGACSFH NVE AE A ESLF++EPWNP
Sbjct: 288 VDLLGRAGELQEAYDLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNP 347

Query: 182 GNYVILSNIYATAGRWDGVAKLRKLMKGRQITKAAGYSFIEEGGQIHQFIVEDKSHPRSD 361
           GNYVIL NIYA+A RWDGVAKLRKLMKG QITKAAGYS IE  G+IH+FIVEDKSHPR  
Sbjct: 348 GNYVILCNIYASAQRWDGVAKLRKLMKGGQITKAAGYSVIEGEGEIHKFIVEDKSHPRHY 407

Query: 362 EIYSLLKEISTRMKLNNATDFDIMEEL 442
           EIY+LL EIST+MKL   T+ D   EL
Sbjct: 408 EIYALLNEISTKMKL-QITEDDFKPEL 433


>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score =  224 bits (571), Expect = 6e-57
 Identities = 112/143 (78%), Positives = 127/143 (88%), Gaps = 1/143 (0%)
 Frame = +2

Query: 2   VDLLGRAGELQEAYNLIESMPMKQDSVVWGALLGACSFHGNVELAEKAVESLFKLEPWNP 181
           VDLLGRAGEL+EA++LI  MPM+ DSVVWG LLGACSFHG+VELAEKA  +LF+LEP NP
Sbjct: 360 VDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNP 419

Query: 182 GNYVILSNIYATAGRWDGVAKLRKLMKGRQITKAAGYSFIEEGGQIHQFIVEDKSHPRSD 361
           GNYVILSNIYATAGRWDGVA+LRKLMKG +ITKAAGYSFIEEGG IH+FIVED+SH RSD
Sbjct: 420 GNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRSHSRSD 479

Query: 362 EIYSLLKEISTRMKLN-NATDFD 427
           EIY+LL E+S +MKL+ N  D D
Sbjct: 480 EIYALLDEVSMKMKLHGNVNDSD 502


>emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
          Length = 967

 Score =  224 bits (571), Expect = 6e-57
 Identities = 112/143 (78%), Positives = 127/143 (88%), Gaps = 1/143 (0%)
 Frame = +2

Query: 2    VDLLGRAGELQEAYNLIESMPMKQDSVVWGALLGACSFHGNVELAEKAVESLFKLEPWNP 181
            VDLLGRAGEL+EA++LI  MPM+ DSVVWG LLGACSFHG+VELAEKA  +LF+LEP NP
Sbjct: 815  VDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNP 874

Query: 182  GNYVILSNIYATAGRWDGVAKLRKLMKGRQITKAAGYSFIEEGGQIHQFIVEDKSHPRSD 361
            GNYVILSNIYATAGRWDGVA+LRKLMKG +ITKAAGYSFIEEGG IH+FIVED+SH RSD
Sbjct: 875  GNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRSHSRSD 934

Query: 362  EIYSLLKEISTRMKLN-NATDFD 427
            EIY+LL E+S +MKL+ N  D D
Sbjct: 935  EIYALLDEVSMKMKLHGNVNDSD 957


>ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Glycine max]
          Length = 512

 Score =  219 bits (557), Expect = 2e-55
 Identities = 103/138 (74%), Positives = 123/138 (89%)
 Frame = +2

Query: 2   VDLLGRAGELQEAYNLIESMPMKQDSVVWGALLGACSFHGNVELAEKAVESLFKLEPWNP 181
           VDLLGRAG+L+EAY +I+ MPMK DSV+WGALLGACSFH NVELAE A ESLF LEPWNP
Sbjct: 361 VDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFALEPWNP 420

Query: 182 GNYVILSNIYATAGRWDGVAKLRKLMKGRQITKAAGYSFIEEGGQIHQFIVEDKSHPRSD 361
           GNYVILSNIYA+AG+WDGVAKLRK+MKG +ITK+AG+SFIEEGGQ+H+FIVED+SHP S+
Sbjct: 421 GNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGGQLHKFIVEDRSHPESN 480

Query: 362 EIYSLLKEISTRMKLNNA 415
           EI++LL  +   +KLN +
Sbjct: 481 EIFALLDGVYEMIKLNRS 498


>ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g08510-like [Glycine max]
          Length = 474

 Score =  214 bits (546), Expect = 4e-54
 Identities = 101/138 (73%), Positives = 123/138 (89%)
 Frame = +2

Query: 2   VDLLGRAGELQEAYNLIESMPMKQDSVVWGALLGACSFHGNVELAEKAVESLFKLEPWNP 181
           VDLLGRAG+L+EAY +I+SM MK DSV+WGALLGACSFHGNVELAE A ESLF LEPWNP
Sbjct: 325 VDLLGRAGQLREAYEVIQSMSMKPDSVIWGALLGACSFHGNVELAEIAAESLFVLEPWNP 384

Query: 182 GNYVILSNIYATAGRWDGVAKLRKLMKGRQITKAAGYSFIEEGGQIHQFIVEDKSHPRSD 361
           GNYVILSNIYA+AG+WDGVAKLRK+MKG +ITK+AG+SFIEEG Q+H+FIV+D+SHP+S+
Sbjct: 385 GNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGAQLHKFIVKDRSHPKSN 444

Query: 362 EIYSLLKEISTRMKLNNA 415
           EI++LL  +   +KL  +
Sbjct: 445 EIFALLDGVYEMVKLTRS 462


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