BLASTX nr result

ID: Panax21_contig00019040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019040
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   186   3e-45
emb|CBI15756.3| unnamed protein product [Vitis vinifera]              186   3e-45
ref|XP_002511091.1| RNA-binding protein, putative [Ricinus commu...   160   2e-37
ref|XP_002321750.1| predicted protein [Populus trichocarpa] gi|2...   129   5e-28
ref|XP_002333627.1| predicted protein [Populus trichocarpa] gi|2...   123   3e-26

>ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 991

 Score =  186 bits (473), Expect = 3e-45
 Identities = 101/215 (46%), Positives = 134/215 (62%), Gaps = 3/215 (1%)
 Frame = -3

Query: 656  QQFSPLLAQDERSRYGRLNDNSSSE-QIVSPASMTSSCIHGGSFRSLHSKNQMSVGAFNE 480
            Q  S  L QDE       +DN SS    VSP   TSSC+   S + LHS  +M +G+F E
Sbjct: 440  QLCSSELEQDESILCQSPDDNLSSGCMAVSPGIKTSSCMDNVSIQDLHSAVRMPIGSFVE 499

Query: 479  NSLSQGSFSVPSSYP--VRATTICNQFGLHEPIYSLNQGKSCNQASPSHHLHSFPEYYEG 306
            N+ S GS SVP++ P  +R  +I N+FGL E   +L+Q K  NQ+ P++H HS PEY++ 
Sbjct: 500  NATSHGSSSVPNTLPSPMRVVSIINEFGLGETSNTLDQMKFGNQSFPNYHPHSLPEYHDN 559

Query: 305  SANVIPYNAFSTVADLAIDVGPRILEGINDRHIYVTDSNGQQVERQVGVFGTSWNSGCRL 126
             AN I YN+ ST+ D+   VGPRI EGI++RHI+   SNG  +E   G FG+S N  C +
Sbjct: 560  LANAIRYNSSSTIGDMTGHVGPRITEGIDNRHIHRVGSNGHPIELNGGAFGSSGNGSCPV 619

Query: 125  HGDHYVQSNSNSFQHLPTSPLVWPNSSPFVNGVHA 21
            HG H    NS+S+QH  +SP++WPNS  F NGVHA
Sbjct: 620  HGLHRAWGNSSSYQHHSSSPMIWPNSPSFSNGVHA 654


>emb|CBI15756.3| unnamed protein product [Vitis vinifera]
          Length = 998

 Score =  186 bits (473), Expect = 3e-45
 Identities = 101/215 (46%), Positives = 134/215 (62%), Gaps = 3/215 (1%)
 Frame = -3

Query: 656  QQFSPLLAQDERSRYGRLNDNSSSE-QIVSPASMTSSCIHGGSFRSLHSKNQMSVGAFNE 480
            Q  S  L QDE       +DN SS    VSP   TSSC+   S + LHS  +M +G+F E
Sbjct: 447  QLCSSELEQDESILCQSPDDNLSSGCMAVSPGIKTSSCMDNVSIQDLHSAVRMPIGSFVE 506

Query: 479  NSLSQGSFSVPSSYP--VRATTICNQFGLHEPIYSLNQGKSCNQASPSHHLHSFPEYYEG 306
            N+ S GS SVP++ P  +R  +I N+FGL E   +L+Q K  NQ+ P++H HS PEY++ 
Sbjct: 507  NATSHGSSSVPNTLPSPMRVVSIINEFGLGETSNTLDQMKFGNQSFPNYHPHSLPEYHDN 566

Query: 305  SANVIPYNAFSTVADLAIDVGPRILEGINDRHIYVTDSNGQQVERQVGVFGTSWNSGCRL 126
             AN I YN+ ST+ D+   VGPRI EGI++RHI+   SNG  +E   G FG+S N  C +
Sbjct: 567  LANAIRYNSSSTIGDMTGHVGPRITEGIDNRHIHRVGSNGHPIELNGGAFGSSGNGSCPV 626

Query: 125  HGDHYVQSNSNSFQHLPTSPLVWPNSSPFVNGVHA 21
            HG H    NS+S+QH  +SP++WPNS  F NGVHA
Sbjct: 627  HGLHRAWGNSSSYQHHSSSPMIWPNSPSFSNGVHA 661


>ref|XP_002511091.1| RNA-binding protein, putative [Ricinus communis]
            gi|223550206|gb|EEF51693.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 972

 Score =  160 bits (406), Expect = 2e-37
 Identities = 88/192 (45%), Positives = 118/192 (61%), Gaps = 2/192 (1%)
 Frame = -3

Query: 572  SPASMTSSCIHGGSFRSLHSKNQMSVGAFNENSLSQGSFSVPSSYP--VRATTICNQFGL 399
            SP  + SSC+  GS + +HS  Q  VG+F E   S  S SVP++ P  V  T+I  QFGL
Sbjct: 467  SPGVIASSCMENGSTQVIHSAIQSPVGSFIE---SHRSSSVPNNLPSPVSVTSISKQFGL 523

Query: 398  HEPIYSLNQGKSCNQASPSHHLHSFPEYYEGSANVIPYNAFSTVADLAIDVGPRILEGIN 219
            HEP  S+++    NQ  PS H HS PEY +G AN +P+N+ S++  +A  VG ++ EGI+
Sbjct: 524  HEPNRSMDEMMFGNQRIPSFHPHSLPEYPDGLANGVPFNSSSSIGGMAHSVGSKVTEGIS 583

Query: 218  DRHIYVTDSNGQQVERQVGVFGTSWNSGCRLHGDHYVQSNSNSFQHLPTSPLVWPNSSPF 39
             RHI    SNG  +E   GVFG+S N    L G HY+ +NSN+ Q   +S ++WPNSS F
Sbjct: 584  SRHIQAVSSNGHLMELNGGVFGSSGNGS--LPGHHYMWNNSNTNQQHHSSRMIWPNSSSF 641

Query: 38   VNGVHAHCTPKL 3
             NGVHAH  P +
Sbjct: 642  TNGVHAHHLPHM 653


>ref|XP_002321750.1| predicted protein [Populus trichocarpa] gi|222868746|gb|EEF05877.1|
           predicted protein [Populus trichocarpa]
          Length = 919

 Score =  129 bits (324), Expect = 5e-28
 Identities = 82/202 (40%), Positives = 107/202 (52%), Gaps = 2/202 (0%)
 Frame = -3

Query: 602 NDNSSSEQIV-SPASMTSSCIHGGSFRSLHSKNQMSVGAFNE-NSLSQGSFSVPSSYPVR 429
           ND SS      SP    SS +  GS + LHS     +GAF E +  S  S ++PS  PV 
Sbjct: 404 NDLSSGPLATFSPGVSASSYMANGSSQVLHSAIPSQLGAFAELHRSSSVSNNLPS--PVT 461

Query: 428 ATTICNQFGLHEPIYSLNQGKSCNQASPSHHLHSFPEYYEGSANVIPYNAFSTVADLAID 249
           A+    QF       S+++ K  N+  PS H HS PEY++  AN IPYN+ ST+ D+   
Sbjct: 462 ASA-AKQF-------SIDEMKFGNKCIPSIHPHSLPEYHDSFANTIPYNSPSTIRDMPSS 513

Query: 248 VGPRILEGINDRHIYVTDSNGQQVERQVGVFGTSWNSGCRLHGDHYVQSNSNSFQHLPTS 69
              ++ EGIN  HI    SNG  +E   GVFG+     C L G HYV  NS S Q  P++
Sbjct: 514 FTSKVTEGINSLHIRGVGSNGHMMELNGGVFGSPGTGSCTLPGHHYVWKNSKSGQQHPSN 573

Query: 68  PLVWPNSSPFVNGVHAHCTPKL 3
            ++W NS  F NGVHAH  P +
Sbjct: 574 AMIWSNSPSFANGVHAHHVPHM 595


>ref|XP_002333627.1| predicted protein [Populus trichocarpa] gi|222837850|gb|EEE76215.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  123 bits (308), Expect = 3e-26
 Identities = 77/198 (38%), Positives = 101/198 (51%), Gaps = 1/198 (0%)
 Frame = -3

Query: 593 SSSEQIVSPASMTSSCIHGGSFRSLHSKNQMSVGAFNE-NSLSQGSFSVPSSYPVRATTI 417
           S S    SP    SS +   S + LHS     +GAF + +  S  S ++PS  PV A+  
Sbjct: 135 SGSLATFSPGVSASSYMENRSTQVLHSAIPSQLGAFTDLHRSSSVSINLPS--PVTASAA 192

Query: 416 CNQFGLHEPIYSLNQGKSCNQASPSHHLHSFPEYYEGSANVIPYNAFSTVADLAIDVGPR 237
                      S+++ K  NQ  PS H HS PEY++  AN I YN+  T+ D+      +
Sbjct: 193 KQ--------ISISEMKFGNQCIPSTHPHSLPEYHDSLANTISYNSPGTIRDMPSSFTSK 244

Query: 236 ILEGINDRHIYVTDSNGQQVERQVGVFGTSWNSGCRLHGDHYVQSNSNSFQHLPTSPLVW 57
           + EGIN  HI    SNG  +E   GV G+     C L G HYV  NS S Q  P+S ++W
Sbjct: 245 VAEGINSLHIQGVGSNGHLMELIGGVSGSPGAGSCSLPGHHYVWKNSKSGQQHPSSGMIW 304

Query: 56  PNSSPFVNGVHAHCTPKL 3
           PNS  FVNGVHAH  P +
Sbjct: 305 PNSPSFVNGVHAHHLPHM 322


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