BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019021
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM...   108   2e-21
ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, put...   107   3e-21
ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago...   106   8e-21
ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis...   106   8e-21
emb|CAA66406.1| orf12 [Arabidopsis thaliana]                          106   8e-21

>ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like [Glycine max]
          Length = 505

 Score =  108 bits (270), Expect = 2e-21
 Identities = 51/65 (78%), Positives = 57/65 (87%)
 Frame = +1

Query: 661 KVNVLYLDTTYCNPKYRFPLKEEVLNFVVRVAKNFLKK*PKTLVIVGTYIIGKECVYLAI 840
           +VNVLYLDTTYCNPKYRFP KEEVLN+VV++ KN LK  P+TLV+VG Y IGKECVYLAI
Sbjct: 298 RVNVLYLDTTYCNPKYRFPSKEEVLNYVVKITKNHLKIHPRTLVVVGAYSIGKECVYLAI 357

Query: 841 FKALG 855
            KALG
Sbjct: 358 SKALG 362


>ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223547811|gb|EEF49303.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 493

 Score =  107 bits (268), Expect = 3e-21
 Identities = 49/65 (75%), Positives = 58/65 (89%)
 Frame = +1

Query: 661 KVNVLYLDTTYCNPKYRFPLKEEVLNFVVRVAKNFLKK*PKTLVIVGTYIIGKECVYLAI 840
           KVN LYLDTTYCNPKY+FP KE+VLN+VVRV K+FLK+ P+TL++VG Y IGKECVYL+I
Sbjct: 286 KVNALYLDTTYCNPKYKFPSKEDVLNYVVRVTKDFLKQQPETLIVVGAYSIGKECVYLSI 345

Query: 841 FKALG 855
            KALG
Sbjct: 346 SKALG 350


>ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
           gi|87241310|gb|ABD33168.1| DNA repair
           metallo-beta-lactamase [Medicago truncatula]
           gi|355499554|gb|AES80757.1| DNA cross-link repair
           protein SNM1 [Medicago truncatula]
          Length = 511

 Score =  106 bits (264), Expect = 8e-21
 Identities = 48/65 (73%), Positives = 57/65 (87%)
 Frame = +1

Query: 661 KVNVLYLDTTYCNPKYRFPLKEEVLNFVVRVAKNFLKK*PKTLVIVGTYIIGKECVYLAI 840
           +VNVLYLDTTYCNPKY+FP K++VLN+VV++  N LKK P+TLV+VG Y IGKECVYLAI
Sbjct: 304 RVNVLYLDTTYCNPKYKFPSKDDVLNYVVKITNNHLKKYPRTLVVVGAYSIGKECVYLAI 363

Query: 841 FKALG 855
            KALG
Sbjct: 364 SKALG 368


>ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
           gi|30688447|ref|NP_850635.1| DNA cross-link repair
           protein SNM1 [Arabidopsis thaliana]
           gi|79313637|ref|NP_001030773.1| DNA cross-link repair
           protein SNM1 [Arabidopsis thaliana]
           gi|73621911|sp|Q38961.1|SNM1_ARATH RecName: Full=DNA
           cross-link repair protein SNM1; Short=AtSNM1
           gi|1402886|emb|CAA66817.1| hypothetical protein
           [Arabidopsis thaliana] gi|11994302|dbj|BAB01732.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|26449933|dbj|BAC42087.1| unknown protein [Arabidopsis
           thaliana] gi|28827378|gb|AAO50533.1| unknown protein
           [Arabidopsis thaliana] gi|332643675|gb|AEE77196.1| DNA
           cross-link repair protein SNM1 [Arabidopsis thaliana]
           gi|332643676|gb|AEE77197.1| DNA cross-link repair
           protein SNM1 [Arabidopsis thaliana]
           gi|332643677|gb|AEE77198.1| DNA cross-link repair
           protein SNM1 [Arabidopsis thaliana]
          Length = 484

 Score =  106 bits (264), Expect = 8e-21
 Identities = 47/65 (72%), Positives = 60/65 (92%)
 Frame = +1

Query: 661 KVNVLYLDTTYCNPKYRFPLKEEVLNFVVRVAKNFLKK*PKTLVIVGTYIIGKECVYLAI 840
           +V+VLYLDTTYCNP+Y+FP KE+VL++VVR+ K+FL+K PKTL++VG+Y IGKECVYLAI
Sbjct: 277 RVHVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGSYSIGKECVYLAI 336

Query: 841 FKALG 855
            KALG
Sbjct: 337 AKALG 341


>emb|CAA66406.1| orf12 [Arabidopsis thaliana]
          Length = 484

 Score =  106 bits (264), Expect = 8e-21
 Identities = 47/65 (72%), Positives = 60/65 (92%)
 Frame = +1

Query: 661 KVNVLYLDTTYCNPKYRFPLKEEVLNFVVRVAKNFLKK*PKTLVIVGTYIIGKECVYLAI 840
           +V+VLYLDTTYCNP+Y+FP KE+VL++VVR+ K+FL+K PKTL++VG+Y IGKECVYLAI
Sbjct: 277 RVHVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGSYSIGKECVYLAI 336

Query: 841 FKALG 855
            KALG
Sbjct: 337 AKALG 341