BLASTX nr result

ID: Panax21_contig00018982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018982
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285123.1| PREDICTED: yrdC domain-containing protein, m...   192   7e-47
ref|XP_002530287.1| Protein SUA5, putative [Ricinus communis] gi...   192   7e-47
ref|XP_003538209.1| PREDICTED: yrdC domain-containing protein, m...   191   9e-47
ref|XP_002313460.1| predicted protein [Populus trichocarpa] gi|2...   189   6e-46
ref|NP_974970.1| DHBP synthase RibB-like alpha/beta domain-conta...   182   5e-44

>ref|XP_002285123.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Vitis
           vinifera] gi|297746251|emb|CBI16307.3| unnamed protein
           product [Vitis vinifera]
          Length = 272

 Score =  192 bits (487), Expect = 7e-47
 Identities = 93/115 (80%), Positives = 106/115 (92%)
 Frame = -1

Query: 685 GDSSILEKSLNPGLNSIGVRVPDCNFIRVITRGSGSALALTSANLSGKPSSVDIKDFADL 506
           G+ SI+EKSLNPGL+SIGVRVPDC+FIRVI  GS +ALALTSANLSG+PSSV IKDF +L
Sbjct: 154 GELSIIEKSLNPGLDSIGVRVPDCDFIRVIAHGSETALALTSANLSGQPSSVCIKDFENL 213

Query: 505 WEHCAYVYDGGVLPSGRAGSTVVDLTSIGKYKILRPGSAKEETIAVLERHSLLED 341
           WEHCAYVYDGGVLPSGRAGSTVVDL+ +GKYKILRPGSA EET+A+LERHSL+ +
Sbjct: 214 WEHCAYVYDGGVLPSGRAGSTVVDLSRLGKYKILRPGSAMEETVAILERHSLMPE 268


>ref|XP_002530287.1| Protein SUA5, putative [Ricinus communis]
           gi|223530185|gb|EEF32094.1| Protein SUA5, putative
           [Ricinus communis]
          Length = 233

 Score =  192 bits (487), Expect = 7e-47
 Identities = 93/117 (79%), Positives = 105/117 (89%)
 Frame = -1

Query: 685 GDSSILEKSLNPGLNSIGVRVPDCNFIRVITRGSGSALALTSANLSGKPSSVDIKDFADL 506
           G+SS LEKSLNPGL++IGVRVPDCNFIR I  G G A+ALTSANLSGKPSSV IKDF +L
Sbjct: 115 GESSALEKSLNPGLDTIGVRVPDCNFIREIAHGLGRAVALTSANLSGKPSSVCIKDFENL 174

Query: 505 WEHCAYVYDGGVLPSGRAGSTVVDLTSIGKYKILRPGSAKEETIAVLERHSLLEDGT 335
           WEHCAYVYDGGVLPSGR GSTVVDL+ +GKYKILRPGSAKEET+ +LE+HSL+E+ T
Sbjct: 175 WEHCAYVYDGGVLPSGREGSTVVDLSRLGKYKILRPGSAKEETVEILEKHSLVEEVT 231


>ref|XP_003538209.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
           [Glycine max]
          Length = 290

 Score =  191 bits (486), Expect = 9e-47
 Identities = 90/117 (76%), Positives = 107/117 (91%)
 Frame = -1

Query: 685 GDSSILEKSLNPGLNSIGVRVPDCNFIRVITRGSGSALALTSANLSGKPSSVDIKDFADL 506
           GDSSILE+SLNPG +SIGVRVPDCNFIR+I RGSG+ALALTSANLSG+PSS+ IKDF +L
Sbjct: 173 GDSSILERSLNPGFDSIGVRVPDCNFIRIIARGSGTALALTSANLSGQPSSLSIKDFENL 232

Query: 505 WEHCAYVYDGGVLPSGRAGSTVVDLTSIGKYKILRPGSAKEETIAVLERHSLLEDGT 335
           WEHCA+VYDGG++PS RAGST+VDLT+  KY+ILRPGSAKEET+A+LE+HS +E  T
Sbjct: 233 WEHCAFVYDGGLIPSSRAGSTIVDLTTPHKYRILRPGSAKEETVAILEKHSFVEAET 289


>ref|XP_002313460.1| predicted protein [Populus trichocarpa] gi|222849868|gb|EEE87415.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  189 bits (479), Expect = 6e-46
 Identities = 90/115 (78%), Positives = 104/115 (90%)
 Frame = -1

Query: 685 GDSSILEKSLNPGLNSIGVRVPDCNFIRVITRGSGSALALTSANLSGKPSSVDIKDFADL 506
           G+SS LEKSLNPGL+S+GVRVPDCNFIRV+ RG G A+ALTSANLSG+PSS+ IKDF +L
Sbjct: 114 GESSALEKSLNPGLDSVGVRVPDCNFIRVVARGLGKAVALTSANLSGQPSSLCIKDFENL 173

Query: 505 WEHCAYVYDGGVLPSGRAGSTVVDLTSIGKYKILRPGSAKEETIAVLERHSLLED 341
           W  CAYVYDGGVLPS RAGST+VDLT  GKYKILRPGSAKEET+A+LE+HSL+E+
Sbjct: 174 WNRCAYVYDGGVLPSNRAGSTIVDLTRPGKYKILRPGSAKEETLAILEKHSLVEE 228


>ref|NP_974970.1| DHBP synthase RibB-like alpha/beta domain-containing protein
           [Arabidopsis thaliana] gi|332009969|gb|AED97352.1| DHBP
           synthase RibB-like alpha/beta domain-containing protein
           [Arabidopsis thaliana]
          Length = 288

 Score =  182 bits (462), Expect = 5e-44
 Identities = 85/115 (73%), Positives = 103/115 (89%)
 Frame = -1

Query: 685 GDSSILEKSLNPGLNSIGVRVPDCNFIRVITRGSGSALALTSANLSGKPSSVDIKDFADL 506
           G+SSILEKSLNPG+ +IGVRVPDC FIR ++RGSGS LALTSANLSG  SSV +KDF +L
Sbjct: 163 GESSILEKSLNPGIGTIGVRVPDCEFIREVSRGSGSVLALTSANLSGDRSSVCVKDFENL 222

Query: 505 WEHCAYVYDGGVLPSGRAGSTVVDLTSIGKYKILRPGSAKEETIAVLERHSLLED 341
           W+HCAYVYDGG+LPSGRAGST+VDLT +GKYKI+RPGSAK+ T+A+LE++ L E+
Sbjct: 223 WQHCAYVYDGGLLPSGRAGSTIVDLTKVGKYKIIRPGSAKQATVAILEKYLLEEE 277


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