BLASTX nr result

ID: Panax21_contig00018962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018962
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like ...   285   3e-75
emb|CBI20722.3| unnamed protein product [Vitis vinifera]              285   3e-75
ref|XP_002309467.1| f-box family protein [Populus trichocarpa] g...   273   1e-71
ref|XP_002516134.1| conserved hypothetical protein [Ricinus comm...   271   7e-71
ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|2...   270   1e-70

>ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like [Vitis vinifera]
          Length = 922

 Score =  285 bits (730), Expect = 3e-75
 Identities = 149/189 (78%), Positives = 158/189 (83%)
 Frame = -3

Query: 571 AHAALNCPLLNDLDIASCHKLSDAAIRSAAISCQLLESLDMSNCSCVSDETLREIXXXXX 392
           AHA LNCPLL+DLDI SCHKL+DAAIRSAA SC LLESLDMSNCSCVSD+TLREI     
Sbjct: 363 AHAVLNCPLLHDLDIGSCHKLTDAAIRSAATSCPLLESLDMSNCSCVSDDTLREIALTCA 422

Query: 391 XXXXXXASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAISHSYMLEVLELDNCXXXX 212
                 ASYCPNISLESVRL MLTVLKLHSCEGITSASMAAISHSYMLEVLELDNC    
Sbjct: 423 NLHILDASYCPNISLESVRLSMLTVLKLHSCEGITSASMAAISHSYMLEVLELDNCSLLT 482

Query: 211 XXXXXXXXLQNIRLVHCRKFIELNLRSIVLSSIKVSNCPSLQRINITSNSLQKLVLQKQE 32
                   LQNIRLVHCRKF++LNLRSI+LSS+ VSNCP+L RIN+TSNSLQKLVLQKQ 
Sbjct: 483 SVSLELPRLQNIRLVHCRKFVDLNLRSIMLSSMTVSNCPALHRINVTSNSLQKLVLQKQA 542

Query: 31  SLTTLALQC 5
           SLTTLALQC
Sbjct: 543 SLTTLALQC 551



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
 Frame = -3

Query: 571  AHAALNCPLLNDLDIASCHKLSDAAIRSAAISCQLLESLDMSNCSCVSDETLREIXXXXX 392
            + A++NCP+L  LD + C KL D  + + A SC  +ESL + +C  V  E L  +     
Sbjct: 678  SEASINCPMLTSLDASFCSKLKDDCLSATAASCPFIESLILMSCPSVGYEGLSSL-RLLP 736

Query: 391  XXXXXXASYCPNISLESV--RLPMLTVLKLHSCEGITSASMAAISHSYMLEVL-ELD 230
                   SY   ++L+ V      L VLKL +C+ +T +S+ A+     L  L ELD
Sbjct: 737  HLTLLDLSYTFLMNLQPVFESCLQLKVLKLQACKYLTDSSLEALYKEGALPALCELD 793



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 5/190 (2%)
 Frame = -3

Query: 556  NCPLLNDLDIAS--CHKL---SDAAIRSAAISCQLLESLDMSNCSCVSDETLREIXXXXX 392
            NCP L+ +++ S    KL     A++ + A+ CQ L+ +D+++C  +++           
Sbjct: 519  NCPALHRINVTSNSLQKLVLQKQASLTTLALQCQYLQEVDLTDCESLTN----------- 567

Query: 391  XXXXXXASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAISHSYMLEVLELDNCXXXX 212
                   S C   S +    PML  L L +CE +T+    + S    L  L L  C    
Sbjct: 568  -------SICDVFS-DDGGCPMLKSLVLDNCECLTAVGFRSTS----LVSLSLVGCRAIT 615

Query: 211  XXXXXXXXLQNIRLVHCRKFIELNLRSIVLSSIKVSNCPSLQRINITSNSLQKLVLQKQE 32
                    L+ + L  C      + R + L S+ +  CP L  ++I + S+ +L L+   
Sbjct: 616  SLELVCPYLEQVHLDGCDHLERASFRPVGLRSLNLGICPKLSALHIEAPSMVQLELKGCG 675

Query: 31   SLTTLALQCP 2
             L+  ++ CP
Sbjct: 676  GLSEASINCP 685


>emb|CBI20722.3| unnamed protein product [Vitis vinifera]
          Length = 957

 Score =  285 bits (730), Expect = 3e-75
 Identities = 149/189 (78%), Positives = 158/189 (83%)
 Frame = -3

Query: 571 AHAALNCPLLNDLDIASCHKLSDAAIRSAAISCQLLESLDMSNCSCVSDETLREIXXXXX 392
           AHA LNCPLL+DLDI SCHKL+DAAIRSAA SC LLESLDMSNCSCVSD+TLREI     
Sbjct: 329 AHAVLNCPLLHDLDIGSCHKLTDAAIRSAATSCPLLESLDMSNCSCVSDDTLREIALTCA 388

Query: 391 XXXXXXASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAISHSYMLEVLELDNCXXXX 212
                 ASYCPNISLESVRL MLTVLKLHSCEGITSASMAAISHSYMLEVLELDNC    
Sbjct: 389 NLHILDASYCPNISLESVRLSMLTVLKLHSCEGITSASMAAISHSYMLEVLELDNCSLLT 448

Query: 211 XXXXXXXXLQNIRLVHCRKFIELNLRSIVLSSIKVSNCPSLQRINITSNSLQKLVLQKQE 32
                   LQNIRLVHCRKF++LNLRSI+LSS+ VSNCP+L RIN+TSNSLQKLVLQKQ 
Sbjct: 449 SVSLELPRLQNIRLVHCRKFVDLNLRSIMLSSMTVSNCPALHRINVTSNSLQKLVLQKQA 508

Query: 31  SLTTLALQC 5
           SLTTLALQC
Sbjct: 509 SLTTLALQC 517



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
 Frame = -3

Query: 571 AHAALNCPLLNDLDIASCHKLSDAAIRSAAISCQLLESLDMSNCSCVSDETLREIXXXXX 392
           + A++NCP+L  LD + C KL D  + + A SC  +ESL + +C  V  E L  +     
Sbjct: 644 SEASINCPMLTSLDASFCSKLKDDCLSATAASCPFIESLILMSCPSVGYEGLSSL-RLLP 702

Query: 391 XXXXXXASYCPNISLESV--RLPMLTVLKLHSCEGITSASMAAISHSYMLEVL-ELD 230
                  SY   ++L+ V      L VLKL +C+ +T +S+ A+     L  L ELD
Sbjct: 703 HLTLLDLSYTFLMNLQPVFESCLQLKVLKLQACKYLTDSSLEALYKEGALPALCELD 759



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 5/190 (2%)
 Frame = -3

Query: 556 NCPLLNDLDIAS--CHKL---SDAAIRSAAISCQLLESLDMSNCSCVSDETLREIXXXXX 392
           NCP L+ +++ S    KL     A++ + A+ CQ L+ +D+++C  +++           
Sbjct: 485 NCPALHRINVTSNSLQKLVLQKQASLTTLALQCQYLQEVDLTDCESLTN----------- 533

Query: 391 XXXXXXASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAISHSYMLEVLELDNCXXXX 212
                  S C   S +    PML  L L +CE +T+    + S    L  L L  C    
Sbjct: 534 -------SICDVFS-DDGGCPMLKSLVLDNCECLTAVGFRSTS----LVSLSLVGCRAIT 581

Query: 211 XXXXXXXXLQNIRLVHCRKFIELNLRSIVLSSIKVSNCPSLQRINITSNSLQKLVLQKQE 32
                   L+ + L  C      + R + L S+ +  CP L  ++I + S+ +L L+   
Sbjct: 582 SLELVCPYLEQVHLDGCDHLERASFRPVGLRSLNLGICPKLSALHIEAPSMVQLELKGCG 641

Query: 31  SLTTLALQCP 2
            L+  ++ CP
Sbjct: 642 GLSEASINCP 651


>ref|XP_002309467.1| f-box family protein [Populus trichocarpa]
           gi|222855443|gb|EEE92990.1| f-box family protein
           [Populus trichocarpa]
          Length = 895

 Score =  273 bits (699), Expect = 1e-71
 Identities = 144/189 (76%), Positives = 155/189 (82%)
 Frame = -3

Query: 571 AHAALNCPLLNDLDIASCHKLSDAAIRSAAISCQLLESLDMSNCSCVSDETLREIXXXXX 392
           A A LNCPLL  LDI SCHKL+DAAIRSAAISC  LESLDMSNCSCVSDETLREI     
Sbjct: 333 AQAVLNCPLLRLLDIGSCHKLTDAAIRSAAISCPQLESLDMSNCSCVSDETLREIALTCA 392

Query: 391 XXXXXXASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAISHSYMLEVLELDNCXXXX 212
                 ASYCPNISLESVR+PMLTVLKLHSCEGITSASM+AI++SYMLEVLELDNC    
Sbjct: 393 NLHILNASYCPNISLESVRMPMLTVLKLHSCEGITSASMSAIAYSYMLEVLELDNCSLLT 452

Query: 211 XXXXXXXXLQNIRLVHCRKFIELNLRSIVLSSIKVSNCPSLQRINITSNSLQKLVLQKQE 32
                   LQNIRLVHCRKF +LNL+SI+LSSI +SNCP+L RINITSNSLQKL LQKQE
Sbjct: 453 SVSLDLPRLQNIRLVHCRKFADLNLQSIMLSSIMLSNCPALHRINITSNSLQKLALQKQE 512

Query: 31  SLTTLALQC 5
           +LTTLALQC
Sbjct: 513 NLTTLALQC 521


>ref|XP_002516134.1| conserved hypothetical protein [Ricinus communis]
           gi|223544620|gb|EEF46136.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 997

 Score =  271 bits (692), Expect = 7e-71
 Identities = 146/189 (77%), Positives = 150/189 (79%)
 Frame = -3

Query: 571 AHAALNCPLLNDLDIASCHKLSDAAIRSAAISCQLLESLDMSNCSCVSDETLREIXXXXX 392
           A A LNCPLL  LDI SCHKLSDAAIRSAAISC  LESLDMSNCSCVSDETLREI     
Sbjct: 366 AQAVLNCPLLRLLDIGSCHKLSDAAIRSAAISCPQLESLDMSNCSCVSDETLREIAATCV 425

Query: 391 XXXXXXASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAISHSYMLEVLELDNCXXXX 212
                 ASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAI+HS MLEVLELDNC    
Sbjct: 426 NLHILNASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAIAHSSMLEVLELDNCSLLT 485

Query: 211 XXXXXXXXLQNIRLVHCRKFIELNLRSIVLSSIKVSNCPSLQRINITSNSLQKLVLQKQE 32
                   LQNIRLVHCRKF +LNLRS  LSSI VSNCP+L RINI SNSLQKL LQKQE
Sbjct: 486 SVSLDLPSLQNIRLVHCRKFADLNLRSTKLSSIMVSNCPALHRINIMSNSLQKLALQKQE 545

Query: 31  SLTTLALQC 5
           +LT LALQC
Sbjct: 546 NLTALALQC 554


>ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|222865630|gb|EEF02761.1|
           predicted protein [Populus trichocarpa]
          Length = 957

 Score =  270 bits (690), Expect = 1e-70
 Identities = 143/189 (75%), Positives = 152/189 (80%)
 Frame = -3

Query: 571 AHAALNCPLLNDLDIASCHKLSDAAIRSAAISCQLLESLDMSNCSCVSDETLREIXXXXX 392
           A A LNCPLL  LDI SCHKL+DAAIRSAAISC  L SLDMSNCSCVSDETLREI     
Sbjct: 329 AQAVLNCPLLRLLDIGSCHKLTDAAIRSAAISCPQLASLDMSNCSCVSDETLREISHTCA 388

Query: 391 XXXXXXASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAISHSYMLEVLELDNCXXXX 212
                 ASYCPNISLESVRLPMLT+LKLHSCEGITSASM+AI+HS +LEVLELDNC    
Sbjct: 389 NLHTLNASYCPNISLESVRLPMLTILKLHSCEGITSASMSAIAHSSLLEVLELDNCSLLT 448

Query: 211 XXXXXXXXLQNIRLVHCRKFIELNLRSIVLSSIKVSNCPSLQRINITSNSLQKLVLQKQE 32
                   LQNIRLVHCRKF +LNLRSI+LSSI VSNCP+L RINITSNSLQKL LQKQE
Sbjct: 449 SVSLDLPRLQNIRLVHCRKFADLNLRSIMLSSIMVSNCPALHRINITSNSLQKLALQKQE 508

Query: 31  SLTTLALQC 5
           +L TLALQC
Sbjct: 509 NLATLALQC 517


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