BLASTX nr result

ID: Panax21_contig00018961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018961
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516134.1| conserved hypothetical protein [Ricinus comm...   154   5e-36
dbj|BAK61873.1| F-box / LRR-repeat protein [Citrus unshiu]            150   1e-34
emb|CBI20722.3| unnamed protein product [Vitis vinifera]              146   1e-33
ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_003550260.1| PREDICTED: F-box/LRR-repeat protein 15-like ...   145   3e-33

>ref|XP_002516134.1| conserved hypothetical protein [Ricinus communis]
            gi|223544620|gb|EEF46136.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 997

 Score =  154 bits (390), Expect = 5e-36
 Identities = 79/129 (61%), Positives = 88/129 (68%)
 Frame = +3

Query: 3    SGLPSQNDIDLSVEQPNRLLQNLNCVGCPNIKKVFIPSMARCFHXXXXXXXXXXXXKEVD 182
            S L    +ID  +EQ NRLLQNLNCVGCPNI+KV IP MARCFH            KEVD
Sbjct: 850  SALLCDENIDEPIEQANRLLQNLNCVGCPNIRKVLIPPMARCFHLSSLNLSLSANLKEVD 909

Query: 183  IAXXXXXXXXXXXXXXXEILKLECPKLTSLFLQSCNINEKAVEVAISQCHMLETLDVRFC 362
            IA               EILKLECP+LTSLFLQSCNI+E+ VE AIS+C MLETLDVRFC
Sbjct: 910  IACFSLCILNLSNCCSLEILKLECPRLTSLFLQSCNIDEEDVEAAISRCSMLETLDVRFC 969

Query: 363  PKIHPVSMG 389
            PKI+ +SMG
Sbjct: 970  PKIYSISMG 978


>dbj|BAK61873.1| F-box / LRR-repeat protein [Citrus unshiu]
          Length = 1068

 Score =  150 bits (379), Expect = 1e-34
 Identities = 76/128 (59%), Positives = 86/128 (67%)
 Frame = +3

Query: 6    GLPSQNDIDLSVEQPNRLLQNLNCVGCPNIKKVFIPSMARCFHXXXXXXXXXXXXKEVDI 185
            G+    +I  S++QPNRLLQNLNCVGCPNI+KVFIP  ARCFH            KEVD+
Sbjct: 922  GIFPHENIHESIDQPNRLLQNLNCVGCPNIRKVFIPPQARCFHLSSLNLSLSANLKEVDV 981

Query: 186  AXXXXXXXXXXXXXXXEILKLECPKLTSLFLQSCNINEKAVEVAISQCHMLETLDVRFCP 365
            A               E LKL+CPKLTSLFLQSCNI+E+ VE AI+QC MLETLDVRFCP
Sbjct: 982  ACFNLCFLNLSNCCSLETLKLDCPKLTSLFLQSCNIDEEGVESAITQCGMLETLDVRFCP 1041

Query: 366  KIHPVSMG 389
            KI   SMG
Sbjct: 1042 KICSTSMG 1049


>emb|CBI20722.3| unnamed protein product [Vitis vinifera]
          Length = 957

 Score =  146 bits (369), Expect = 1e-33
 Identities = 76/128 (59%), Positives = 83/128 (64%)
 Frame = +3

Query: 3    SGLPSQNDIDLSVEQPNRLLQNLNCVGCPNIKKVFIPSMARCFHXXXXXXXXXXXXKEVD 182
            S L S  D    +EQPNRLLQNLNCVGC NIKKV IP MARC H            KEVD
Sbjct: 813  SSLSSHGDDHELIEQPNRLLQNLNCVGCQNIKKVLIPPMARCTHLSSLNLSLSANLKEVD 872

Query: 183  IAXXXXXXXXXXXXXXXEILKLECPKLTSLFLQSCNINEKAVEVAISQCHMLETLDVRFC 362
            +A               EILKLECP+LTSLFLQSCNI  +AVE AISQC+MLETLD+RFC
Sbjct: 873  VACYNLCFLNLSNCSSLEILKLECPRLTSLFLQSCNITVEAVEAAISQCNMLETLDIRFC 932

Query: 363  PKIHPVSM 386
            PK+   SM
Sbjct: 933  PKLSNASM 940


>ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|222865630|gb|EEF02761.1|
            predicted protein [Populus trichocarpa]
          Length = 957

 Score =  146 bits (368), Expect = 2e-33
 Identities = 75/129 (58%), Positives = 86/129 (66%)
 Frame = +3

Query: 3    SGLPSQNDIDLSVEQPNRLLQNLNCVGCPNIKKVFIPSMARCFHXXXXXXXXXXXXKEVD 182
            + L S  ++ +S EQPNRLLQNLNCVGCPNI+KV IP +ARC              KEVD
Sbjct: 813  AALFSDENLPVSTEQPNRLLQNLNCVGCPNIRKVAIPPVARCLLLSSLNLSLSSNLKEVD 872

Query: 183  IAXXXXXXXXXXXXXXXEILKLECPKLTSLFLQSCNINEKAVEVAISQCHMLETLDVRFC 362
            +                EILKLECP+LTSLFLQSCNI+E+ VE AISQC MLETLDVRFC
Sbjct: 873  VVCFNLCYLNLSNCCSLEILKLECPRLTSLFLQSCNIDEETVEAAISQCGMLETLDVRFC 932

Query: 363  PKIHPVSMG 389
            PKI  +SMG
Sbjct: 933  PKICSISMG 941


>ref|XP_003550260.1| PREDICTED: F-box/LRR-repeat protein 15-like [Glycine max]
          Length = 982

 Score =  145 bits (367), Expect = 3e-33
 Identities = 76/124 (61%), Positives = 86/124 (69%)
 Frame = +3

Query: 18   QNDIDLSVEQPNRLLQNLNCVGCPNIKKVFIPSMARCFHXXXXXXXXXXXXKEVDIAXXX 197
            +N ++LS EQP RLLQNLNCVGCPNI+KVFIPS A C              KEVD+A   
Sbjct: 841  ENVLELS-EQPIRLLQNLNCVGCPNIRKVFIPSTAHCSRLLFLNLSLSANLKEVDVACLN 899

Query: 198  XXXXXXXXXXXXEILKLECPKLTSLFLQSCNINEKAVEVAISQCHMLETLDVRFCPKIHP 377
                        E+LKLECP+LTSLFLQSCNINE+AVE AIS+C MLETLDVRFCPKI  
Sbjct: 900  LSWLNLSNCSSLEVLKLECPRLTSLFLQSCNINEEAVEAAISKCTMLETLDVRFCPKISS 959

Query: 378  VSMG 389
            +SMG
Sbjct: 960  MSMG 963


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