BLASTX nr result

ID: Panax21_contig00018950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018950
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65243.1| hypothetical protein VITISV_010925 [Vitis vinifera]    94   8e-35
ref|XP_002521080.1| conserved hypothetical protein [Ricinus comm...    89   3e-32
ref|XP_004144384.1| PREDICTED: protein XRI1-like [Cucumis sativu...    92   1e-30
ref|XP_002303048.1| predicted protein [Populus trichocarpa] gi|2...    82   8e-29
ref|XP_003532282.1| PREDICTED: protein XRI1-like [Glycine max]         85   5e-28

>emb|CAN65243.1| hypothetical protein VITISV_010925 [Vitis vinifera]
          Length = 320

 Score = 94.0 bits (232), Expect(2) = 8e-35
 Identities = 47/58 (81%), Positives = 50/58 (86%), Gaps = 2/58 (3%)
 Frame = +3

Query: 240 RDINQRICTPP--KPKQSKEDPSAAYPTSAFSGKPVVGKTKIHTEGGKGCITIMRTKG 407
           +DINQRI TPP  K +QS EDPS +YPTSAFSGKPVVGKTKI TEGGKG ITIMRTKG
Sbjct: 263 KDINQRIRTPPPSKSRQSNEDPSVSYPTSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 320



 Score = 78.2 bits (191), Expect(2) = 8e-35
 Identities = 35/46 (76%), Positives = 42/46 (91%)
 Frame = +1

Query: 1   EASTVQTRRTRTRKNVVFKGKKSYMQSPTKVASSVVYPFAFIKPCG 138
           EA+TVQ R TRT +NV+FKG+KSYM++PTK+ASSV YPFAFIKPCG
Sbjct: 210 EANTVQERATRTPQNVIFKGRKSYMRTPTKLASSVAYPFAFIKPCG 255


>ref|XP_002521080.1| conserved hypothetical protein [Ricinus communis]
           gi|223539649|gb|EEF41231.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 293

 Score = 89.0 bits (219), Expect(2) = 3e-32
 Identities = 47/58 (81%), Positives = 51/58 (87%), Gaps = 2/58 (3%)
 Frame = +3

Query: 240 RDINQRICTPP--KPKQSKEDPSAAYPTSAFSGKPVVGKTKIHTEGGKGCITIMRTKG 407
           +DINQ+I TPP  K KQ++EDP AAYPTSAFSGKPVVGKTKI TEGGKG ITIMRTKG
Sbjct: 237 KDINQKIRTPPPSKLKQNEEDP-AAYPTSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 293



 Score = 74.7 bits (182), Expect(2) = 3e-32
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = +1

Query: 1   EASTVQTRRTRTRKNVVFKGKKSYMQSPTKVASSVVYPFAFIKPCG 138
           EA  VQ R TRT +NV+FKGKKS++++PTK+ASSVVYPFAFIKPCG
Sbjct: 184 EAHAVQKRITRTPRNVIFKGKKSFIRTPTKLASSVVYPFAFIKPCG 229


>ref|XP_004144384.1| PREDICTED: protein XRI1-like [Cucumis sativus]
           gi|449529551|ref|XP_004171763.1| PREDICTED: protein
           XRI1-like [Cucumis sativus]
          Length = 304

 Score = 92.0 bits (227), Expect(2) = 1e-30
 Identities = 46/58 (79%), Positives = 49/58 (84%), Gaps = 2/58 (3%)
 Frame = +3

Query: 240 RDINQRICTPP--KPKQSKEDPSAAYPTSAFSGKPVVGKTKIHTEGGKGCITIMRTKG 407
           +DINQRI TPP  K K   EDPS +YPTSAFSGKPVVGKTKIHTEGGKG ITIMRT+G
Sbjct: 247 KDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG 304



 Score = 66.2 bits (160), Expect(2) = 1e-30
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = +1

Query: 1   EASTVQTRRTRTRKNVVFKGKKSYMQSPTKVASSVVYPFAFIKPCG 138
           +++ VQ   TR   N++FKG+KSY+++PTK+ASSV YPFAFIKPCG
Sbjct: 194 KSNVVQHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCG 239


>ref|XP_002303048.1| predicted protein [Populus trichocarpa] gi|222844774|gb|EEE82321.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 82.0 bits (201), Expect(2) = 8e-29
 Identities = 44/57 (77%), Positives = 45/57 (78%), Gaps = 2/57 (3%)
 Frame = +3

Query: 243 DINQRICTPP--KPKQSKEDPSAAYPTSAFSGKPVVGKTKIHTEGGKGCITIMRTKG 407
           +INQRI TPP  K KQ  EDP   YP SAFSGKPVVGKTKI TEGGKG ITIMRTKG
Sbjct: 225 EINQRIRTPPPSKSKQKDEDP-VVYPMSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 280



 Score = 70.1 bits (170), Expect(2) = 8e-29
 Identities = 33/46 (71%), Positives = 39/46 (84%)
 Frame = +1

Query: 1   EASTVQTRRTRTRKNVVFKGKKSYMQSPTKVASSVVYPFAFIKPCG 138
           EASTVQ    RT +NVVFKG KS++Q+PTK+A+SV YPFAFIKPCG
Sbjct: 171 EASTVQKCVPRTPRNVVFKGTKSFIQTPTKLATSVAYPFAFIKPCG 216


>ref|XP_003532282.1| PREDICTED: protein XRI1-like [Glycine max]
          Length = 302

 Score = 84.7 bits (208), Expect(2) = 5e-28
 Identities = 44/60 (73%), Positives = 49/60 (81%), Gaps = 4/60 (6%)
 Frame = +3

Query: 240 RDINQRICTPPKP----KQSKEDPSAAYPTSAFSGKPVVGKTKIHTEGGKGCITIMRTKG 407
           ++INQRI +PP P    +QS EDPSA YP SAFSGKPVVGKT+IH EGGKG ITIMRTKG
Sbjct: 244 KEINQRILSPPPPLKSQQQSMEDPSA-YPKSAFSGKPVVGKTRIHIEGGKGSITIMRTKG 302



 Score = 64.7 bits (156), Expect(2) = 5e-28
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = +1

Query: 1   EASTVQTRRTRTRKNVVFKGKKSYMQSPTKVASSVVYPFAFIKPCG 138
           E + VQ   T+T KN++FKG KS++++PTK+A+SV YPFAFIKPCG
Sbjct: 191 EQNVVQHGFTQTPKNIIFKGGKSFIETPTKLAASVAYPFAFIKPCG 236


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