BLASTX nr result

ID: Panax21_contig00018941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018941
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera]   241   2e-61
ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2...   234   2e-59
ref|XP_002515412.1| RNA binding protein, putative [Ricinus commu...   226   4e-57
ref|XP_003628951.1| U2-associated protein SR140 [Medicago trunca...   221   2e-55
ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|2...   219   5e-55

>emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera]
          Length = 1384

 Score =  241 bits (614), Expect = 2e-61
 Identities = 127/188 (67%), Positives = 150/188 (79%), Gaps = 2/188 (1%)
 Frame = -2

Query: 777  SGRYPSGQKETNIEMEPGVLSGWTHNGEDEMPSEGKGSGLLAPTIPIPQPELRAFTNKGK 598
            SGRYPS +KE  +E E   LSGW   GEDE+ S+GKGS  LAPTIPIPQPEL+AFTNKGK
Sbjct: 855  SGRYPSSRKEIGVETESVGLSGWNRYGEDEIQSQGKGSVPLAPTIPIPQPELKAFTNKGK 914

Query: 597  NEPVLTSSKWARDDDESDDEQKTSTKDLGLTYSSSGSEIAGE-DLKTLEMELATDASIPV 421
             +PVL +SKWAR+DD+SDDEQK S + LGL+YSSSGSE AG+   K  EME AT++SIP 
Sbjct: 915  TDPVLPASKWAREDDDSDDEQKRSARGLGLSYSSSGSENAGDGPXKADEMEFATESSIPS 974

Query: 420  HLDTG-IDEEQRQKLRRIEVALIEYHESLEDRGIKSFGEIEKKVAIHRKRLHSEFGLLDS 244
              D+G ++EE RQKLRR+EVALIEY ESLE+RGIKS  EIE+KVAIHRKRL SE+GL DS
Sbjct: 975  QPDSGMMNEEHRQKLRRLEVALIEYRESLEERGIKSSEEIERKVAIHRKRLQSEYGLSDS 1034

Query: 243  NANSADNK 220
            N + + NK
Sbjct: 1035 NEDVSWNK 1042


>ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1|
            predicted protein [Populus trichocarpa]
          Length = 988

 Score =  234 bits (597), Expect = 2e-59
 Identities = 127/228 (55%), Positives = 155/228 (67%), Gaps = 1/228 (0%)
 Frame = -2

Query: 777  SGRYPSGQKETNIEMEPGVLSGWTHNGEDEMPSEGKGSGLLAPTIPIPQPELRAFTNKGK 598
            S RY S  +E N++  P  L+GW   GED+ PS+ K S  L  T+PIPQPEL+AF  K K
Sbjct: 705  SSRYSSVHREVNVDPGPVGLTGWNIYGEDDTPSQNKRSVSLVSTLPIPQPELKAFAKKEK 764

Query: 597  NEPVLTSSKWARDDDESDDEQKTSTKDLGLTYSSSGSEIAGEDL-KTLEMELATDASIPV 421
            N+PVL +SKWARDDDESDDEQK S +DLGL+YSSSGSE AG+   K  EME ATDASIP 
Sbjct: 765  NDPVLPASKWARDDDESDDEQKRSVRDLGLSYSSSGSENAGDGQGKEDEMEFATDASIPT 824

Query: 420  HLDTGIDEEQRQKLRRIEVALIEYHESLEDRGIKSFGEIEKKVAIHRKRLHSEFGLLDSN 241
              ++G++EEQRQKLRR+EVALIEY ESLE++G+K+  E E+KVA+HRKRL SE+GL  SN
Sbjct: 825  QPESGMNEEQRQKLRRLEVALIEYRESLEEQGMKNSEEFERKVAVHRKRLESEYGLSSSN 884

Query: 240  ANSADNKXXXXXXXXXXXXXXXXXXXXXXXXSQSESPQRKSFSRDREK 97
             +   NK                        S+SESPQRK   RDRE+
Sbjct: 885  EDVTGNKRISSERRDRRDDNHESSRKRHRSESRSESPQRKLSLRDRER 932


>ref|XP_002515412.1| RNA binding protein, putative [Ricinus communis]
            gi|223545356|gb|EEF46861.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 979

 Score =  226 bits (576), Expect = 4e-57
 Identities = 127/230 (55%), Positives = 161/230 (70%), Gaps = 3/230 (1%)
 Frame = -2

Query: 777  SGRYPSGQKETNIEMEPGVLSGWTHNGEDEMPSEGKGSGLLAPTIPIPQPELRAFTNKGK 598
            S ++ SG++ETN+E+EP  +S W   GED++ S+ + S  LA T PIPQ EL+AFT K K
Sbjct: 693  SSKFSSGRRETNVELEP--VSEWNVYGEDDVQSQSRASASLA-TFPIPQAELKAFTKKEK 749

Query: 597  NEPVLTSSKWARDDDESDDEQKTSTKDLGLTYSSSGSEIAGEDLKTL--EMELATDASIP 424
            N+PVL +SKWARDDD+SDDEQK S++ LGL+YSSSGSE AG+ L     EME ATD SI 
Sbjct: 750  NDPVLPASKWARDDDDSDDEQKRSSRGLGLSYSSSGSENAGDGLGKADDEMEFATDGSIS 809

Query: 423  VHLDTGIDEEQRQKLRRIEVALIEYHESLEDRGIKSFGEIEKKVAIHRKRLHSEFGLLDS 244
            V  D+G++EEQRQKLRR+EVALIEY ESLE+RG+KS  EIE+KVA HRKRL S++GLLDS
Sbjct: 810  VQPDSGMNEEQRQKLRRLEVALIEYRESLEERGMKSAEEIERKVASHRKRLQSDYGLLDS 869

Query: 243  NANSADN-KXXXXXXXXXXXXXXXXXXXXXXXXSQSESPQRKSFSRDREK 97
            + ++  N K                        S S SPQRK+ +RDRE+
Sbjct: 870  SQDTPGNSKRASSERRDRRDDSRESSRKRHRSESSSRSPQRKTSTRDRER 919


>ref|XP_003628951.1| U2-associated protein SR140 [Medicago truncatula]
            gi|355522973|gb|AET03427.1| U2-associated protein SR140
            [Medicago truncatula]
          Length = 1139

 Score =  221 bits (562), Expect = 2e-55
 Identities = 113/180 (62%), Positives = 139/180 (77%), Gaps = 1/180 (0%)
 Frame = -2

Query: 777  SGRYPSGQKETNIEMEPGVLSGWTHNGEDEMPSEGKGSGLLAPTIPIPQPELRAFTNKGK 598
            SG+  SGQ+ET+ + EP  LSG  H G++++  +GKG   LAPT+PIPQPEL+AF  K K
Sbjct: 761  SGKNSSGQRETSADPEPMGLSGLNHYGDEDLQLQGKGYAPLAPTLPIPQPELKAFAKKEK 820

Query: 597  NEPVLTSSKWARDDDESDDEQKTSTKDLGLTYSSSGSEIAGEDL-KTLEMELATDASIPV 421
            N+ VL +SKWAR+DDESDDEQ    K+LGL+YSSSGSE  G+DL K  E E A D+S P 
Sbjct: 821  NDLVLPASKWAREDDESDDEQGKGGKNLGLSYSSSGSENVGDDLIKADESEAAADSSFPA 880

Query: 420  HLDTGIDEEQRQKLRRIEVALIEYHESLEDRGIKSFGEIEKKVAIHRKRLHSEFGLLDSN 241
            H D+G++EEQRQKLRR+EVALIEY ESLE+RGIK+  EIEKKV +HRKRL  E+GL DSN
Sbjct: 881  HADSGMNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSDSN 940


>ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|222865775|gb|EEF02906.1|
            predicted protein [Populus trichocarpa]
          Length = 955

 Score =  219 bits (558), Expect = 5e-55
 Identities = 122/208 (58%), Positives = 143/208 (68%), Gaps = 1/208 (0%)
 Frame = -2

Query: 717  SGWTHNGEDEMPSEGKGSGLLAPTIPIPQPELRAFTNKGKNEPVLTSSKWARDDDESDDE 538
            +GW   GEDEMPS+ KGS  +A T+ I QPEL+AF  K KN+PVL +SKWARDDDESDDE
Sbjct: 699  TGWNVYGEDEMPSQNKGSVSVASTLLIKQPELKAFAKKEKNDPVLPASKWARDDDESDDE 758

Query: 537  QKTSTKDLGLTYSSSGSEIAGEDL-KTLEMELATDASIPVHLDTGIDEEQRQKLRRIEVA 361
            QK S +DLGL+YSSSGSE AG+   K  EME ATDA+IP   D+G++EEQRQKLRR+EVA
Sbjct: 759  QKRSARDLGLSYSSSGSENAGDGQGKADEMEFATDANIPTQPDSGMNEEQRQKLRRLEVA 818

Query: 360  LIEYHESLEDRGIKSFGEIEKKVAIHRKRLHSEFGLLDSNANSADNKXXXXXXXXXXXXX 181
            LIEY ESLE+RG+KS  EIE KVAIHRK L SE+GL  SN +    K             
Sbjct: 819  LIEYRESLEERGMKSSVEIEGKVAIHRKWLESEYGLSSSNEDVTSKKSISSERRDRRSDN 878

Query: 180  XXXXXXXXXXXSQSESPQRKSFSRDREK 97
                       S+SESPQRK   RDRE+
Sbjct: 879  HDSSRKRHRNESRSESPQRKLSLRDRER 906


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