BLASTX nr result
ID: Panax21_contig00018941
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00018941 (778 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera] 241 2e-61 ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2... 234 2e-59 ref|XP_002515412.1| RNA binding protein, putative [Ricinus commu... 226 4e-57 ref|XP_003628951.1| U2-associated protein SR140 [Medicago trunca... 221 2e-55 ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|2... 219 5e-55 >emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera] Length = 1384 Score = 241 bits (614), Expect = 2e-61 Identities = 127/188 (67%), Positives = 150/188 (79%), Gaps = 2/188 (1%) Frame = -2 Query: 777 SGRYPSGQKETNIEMEPGVLSGWTHNGEDEMPSEGKGSGLLAPTIPIPQPELRAFTNKGK 598 SGRYPS +KE +E E LSGW GEDE+ S+GKGS LAPTIPIPQPEL+AFTNKGK Sbjct: 855 SGRYPSSRKEIGVETESVGLSGWNRYGEDEIQSQGKGSVPLAPTIPIPQPELKAFTNKGK 914 Query: 597 NEPVLTSSKWARDDDESDDEQKTSTKDLGLTYSSSGSEIAGE-DLKTLEMELATDASIPV 421 +PVL +SKWAR+DD+SDDEQK S + LGL+YSSSGSE AG+ K EME AT++SIP Sbjct: 915 TDPVLPASKWAREDDDSDDEQKRSARGLGLSYSSSGSENAGDGPXKADEMEFATESSIPS 974 Query: 420 HLDTG-IDEEQRQKLRRIEVALIEYHESLEDRGIKSFGEIEKKVAIHRKRLHSEFGLLDS 244 D+G ++EE RQKLRR+EVALIEY ESLE+RGIKS EIE+KVAIHRKRL SE+GL DS Sbjct: 975 QPDSGMMNEEHRQKLRRLEVALIEYRESLEERGIKSSEEIERKVAIHRKRLQSEYGLSDS 1034 Query: 243 NANSADNK 220 N + + NK Sbjct: 1035 NEDVSWNK 1042 >ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1| predicted protein [Populus trichocarpa] Length = 988 Score = 234 bits (597), Expect = 2e-59 Identities = 127/228 (55%), Positives = 155/228 (67%), Gaps = 1/228 (0%) Frame = -2 Query: 777 SGRYPSGQKETNIEMEPGVLSGWTHNGEDEMPSEGKGSGLLAPTIPIPQPELRAFTNKGK 598 S RY S +E N++ P L+GW GED+ PS+ K S L T+PIPQPEL+AF K K Sbjct: 705 SSRYSSVHREVNVDPGPVGLTGWNIYGEDDTPSQNKRSVSLVSTLPIPQPELKAFAKKEK 764 Query: 597 NEPVLTSSKWARDDDESDDEQKTSTKDLGLTYSSSGSEIAGEDL-KTLEMELATDASIPV 421 N+PVL +SKWARDDDESDDEQK S +DLGL+YSSSGSE AG+ K EME ATDASIP Sbjct: 765 NDPVLPASKWARDDDESDDEQKRSVRDLGLSYSSSGSENAGDGQGKEDEMEFATDASIPT 824 Query: 420 HLDTGIDEEQRQKLRRIEVALIEYHESLEDRGIKSFGEIEKKVAIHRKRLHSEFGLLDSN 241 ++G++EEQRQKLRR+EVALIEY ESLE++G+K+ E E+KVA+HRKRL SE+GL SN Sbjct: 825 QPESGMNEEQRQKLRRLEVALIEYRESLEEQGMKNSEEFERKVAVHRKRLESEYGLSSSN 884 Query: 240 ANSADNKXXXXXXXXXXXXXXXXXXXXXXXXSQSESPQRKSFSRDREK 97 + NK S+SESPQRK RDRE+ Sbjct: 885 EDVTGNKRISSERRDRRDDNHESSRKRHRSESRSESPQRKLSLRDRER 932 >ref|XP_002515412.1| RNA binding protein, putative [Ricinus communis] gi|223545356|gb|EEF46861.1| RNA binding protein, putative [Ricinus communis] Length = 979 Score = 226 bits (576), Expect = 4e-57 Identities = 127/230 (55%), Positives = 161/230 (70%), Gaps = 3/230 (1%) Frame = -2 Query: 777 SGRYPSGQKETNIEMEPGVLSGWTHNGEDEMPSEGKGSGLLAPTIPIPQPELRAFTNKGK 598 S ++ SG++ETN+E+EP +S W GED++ S+ + S LA T PIPQ EL+AFT K K Sbjct: 693 SSKFSSGRRETNVELEP--VSEWNVYGEDDVQSQSRASASLA-TFPIPQAELKAFTKKEK 749 Query: 597 NEPVLTSSKWARDDDESDDEQKTSTKDLGLTYSSSGSEIAGEDLKTL--EMELATDASIP 424 N+PVL +SKWARDDD+SDDEQK S++ LGL+YSSSGSE AG+ L EME ATD SI Sbjct: 750 NDPVLPASKWARDDDDSDDEQKRSSRGLGLSYSSSGSENAGDGLGKADDEMEFATDGSIS 809 Query: 423 VHLDTGIDEEQRQKLRRIEVALIEYHESLEDRGIKSFGEIEKKVAIHRKRLHSEFGLLDS 244 V D+G++EEQRQKLRR+EVALIEY ESLE+RG+KS EIE+KVA HRKRL S++GLLDS Sbjct: 810 VQPDSGMNEEQRQKLRRLEVALIEYRESLEERGMKSAEEIERKVASHRKRLQSDYGLLDS 869 Query: 243 NANSADN-KXXXXXXXXXXXXXXXXXXXXXXXXSQSESPQRKSFSRDREK 97 + ++ N K S S SPQRK+ +RDRE+ Sbjct: 870 SQDTPGNSKRASSERRDRRDDSRESSRKRHRSESSSRSPQRKTSTRDRER 919 >ref|XP_003628951.1| U2-associated protein SR140 [Medicago truncatula] gi|355522973|gb|AET03427.1| U2-associated protein SR140 [Medicago truncatula] Length = 1139 Score = 221 bits (562), Expect = 2e-55 Identities = 113/180 (62%), Positives = 139/180 (77%), Gaps = 1/180 (0%) Frame = -2 Query: 777 SGRYPSGQKETNIEMEPGVLSGWTHNGEDEMPSEGKGSGLLAPTIPIPQPELRAFTNKGK 598 SG+ SGQ+ET+ + EP LSG H G++++ +GKG LAPT+PIPQPEL+AF K K Sbjct: 761 SGKNSSGQRETSADPEPMGLSGLNHYGDEDLQLQGKGYAPLAPTLPIPQPELKAFAKKEK 820 Query: 597 NEPVLTSSKWARDDDESDDEQKTSTKDLGLTYSSSGSEIAGEDL-KTLEMELATDASIPV 421 N+ VL +SKWAR+DDESDDEQ K+LGL+YSSSGSE G+DL K E E A D+S P Sbjct: 821 NDLVLPASKWAREDDESDDEQGKGGKNLGLSYSSSGSENVGDDLIKADESEAAADSSFPA 880 Query: 420 HLDTGIDEEQRQKLRRIEVALIEYHESLEDRGIKSFGEIEKKVAIHRKRLHSEFGLLDSN 241 H D+G++EEQRQKLRR+EVALIEY ESLE+RGIK+ EIEKKV +HRKRL E+GL DSN Sbjct: 881 HADSGMNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSDSN 940 >ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|222865775|gb|EEF02906.1| predicted protein [Populus trichocarpa] Length = 955 Score = 219 bits (558), Expect = 5e-55 Identities = 122/208 (58%), Positives = 143/208 (68%), Gaps = 1/208 (0%) Frame = -2 Query: 717 SGWTHNGEDEMPSEGKGSGLLAPTIPIPQPELRAFTNKGKNEPVLTSSKWARDDDESDDE 538 +GW GEDEMPS+ KGS +A T+ I QPEL+AF K KN+PVL +SKWARDDDESDDE Sbjct: 699 TGWNVYGEDEMPSQNKGSVSVASTLLIKQPELKAFAKKEKNDPVLPASKWARDDDESDDE 758 Query: 537 QKTSTKDLGLTYSSSGSEIAGEDL-KTLEMELATDASIPVHLDTGIDEEQRQKLRRIEVA 361 QK S +DLGL+YSSSGSE AG+ K EME ATDA+IP D+G++EEQRQKLRR+EVA Sbjct: 759 QKRSARDLGLSYSSSGSENAGDGQGKADEMEFATDANIPTQPDSGMNEEQRQKLRRLEVA 818 Query: 360 LIEYHESLEDRGIKSFGEIEKKVAIHRKRLHSEFGLLDSNANSADNKXXXXXXXXXXXXX 181 LIEY ESLE+RG+KS EIE KVAIHRK L SE+GL SN + K Sbjct: 819 LIEYRESLEERGMKSSVEIEGKVAIHRKWLESEYGLSSSNEDVTSKKSISSERRDRRSDN 878 Query: 180 XXXXXXXXXXXSQSESPQRKSFSRDREK 97 S+SESPQRK RDRE+ Sbjct: 879 HDSSRKRHRNESRSESPQRKLSLRDRER 906