BLASTX nr result

ID: Panax21_contig00018938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018938
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67843.1| hypothetical protein VITISV_016666 [Vitis vinifera]    97   1e-18
ref|XP_002320379.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002520708.1| conserved hypothetical protein [Ricinus comm...    88   8e-16
emb|CBI32285.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002302816.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15

>emb|CAN67843.1| hypothetical protein VITISV_016666 [Vitis vinifera]
          Length = 1134

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 59/124 (47%), Positives = 79/124 (63%), Gaps = 3/124 (2%)
 Frame = -2

Query: 367 GSRFRRMRLPREPEAI--PKVVDLISTVKKLHGLSSLELSKLIRDSRNNTLQLSIENGLS 194
           GSRF RMR  +E ++    +V+DL+S VK LH L+S EL+KL+RDS N T+Q + E G S
Sbjct: 101 GSRFSRMRHNKEEQSYCTEQVIDLVSAVKGLHTLNSQELNKLLRDSENFTJQYTTEKGPS 160

Query: 193 IKIDVEDLAK-IPIHLIAKLVQFDLNEAXXXXXXXXXXXXXXLYDIAPWFPKLEQILLDD 17
           ++ID E LA  +P+HLIA L+  D +EA              L D+AP   KLEQILLDD
Sbjct: 161 LQIDAEKLAGFLPLHLIAVLISSDKDEALFKYLLCGLRLLHSLCDLAPRQNKLEQILLDD 220

Query: 16  ISLS 5
           + +S
Sbjct: 221 VKVS 224


>ref|XP_002320379.1| predicted protein [Populus trichocarpa] gi|222861152|gb|EEE98694.1|
           predicted protein [Populus trichocarpa]
          Length = 1326

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 55/117 (47%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
 Frame = -2

Query: 349 MRLPREPEAIPK-VVDLISTVKKLHGLSSLELSKLIRDSRNNTLQLSIENGLSIKIDVED 173
           MRL +E  ++ + V+DLIS VK+LHGLSS EL+KL+RDS N T+    E G + KIDVE 
Sbjct: 49  MRLAKEELSMAEQVIDLISAVKELHGLSSQELNKLLRDSENFTIHFHSEKGSTTKIDVEK 108

Query: 172 LAK-IPIHLIAKLVQFDLNEAXXXXXXXXXXXXXXLYDIAPWFPKLEQILLDDISLS 5
           LA  +P+HLIA L+  D +E+              L D+ P   KLEQ+LLDD+ +S
Sbjct: 109 LAGFLPLHLIAVLMSSDRDESLLRYLLCGIRLLHSLCDLGPRNSKLEQVLLDDVKVS 165


>ref|XP_002520708.1| conserved hypothetical protein [Ricinus communis]
           gi|223540093|gb|EEF41670.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 957

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 55/118 (46%), Positives = 73/118 (61%), Gaps = 3/118 (2%)
 Frame = -2

Query: 349 MRLPREPEAI--PKVVDLISTVKKLHGLSSLELSKLIRDSRNNTLQLSIENGLSIKIDVE 176
           MRL ++  +    +V+DLIS VK+LH  SS EL+KLIRDS N T+    E G ++KIDVE
Sbjct: 1   MRLAKDESSCIAEQVIDLISAVKELHWHSSQELNKLIRDSENFTIHFLTEKGSNLKIDVE 60

Query: 175 DLAK-IPIHLIAKLVQFDLNEAXXXXXXXXXXXXXXLYDIAPWFPKLEQILLDDISLS 5
            LA  +P+HLIA L+  D +E+              L D+AP   KLEQILLDD+ +S
Sbjct: 61  KLAGFLPLHLIAVLMSSDKDESLLRYLLCGIRLLHSLCDLAPRHTKLEQILLDDVKVS 118


>emb|CBI32285.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 51/105 (48%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
 Frame = -2

Query: 316 KVVDLISTVKKLHGLSSLELSKLIRDSRNNTLQLSIENGLSIKIDVEDLAK-IPIHLIAK 140
           +V+DL+S VK LH L+S EL+KL+RDS N T+Q + E G S++ID E LA  +P+HLIA 
Sbjct: 14  QVIDLVSAVKGLHTLNSQELNKLLRDSENFTIQYTTEKGPSLQIDAEKLAGFLPLHLIAV 73

Query: 139 LVQFDLNEAXXXXXXXXXXXXXXLYDIAPWFPKLEQILLDDISLS 5
           L+  D +EA              L D+AP   KLEQILLDD+ +S
Sbjct: 74  LISSDKDEALFKYLLCGLRLLHSLCDLAPRQNKLEQILLDDVKVS 118


>ref|XP_002302816.1| predicted protein [Populus trichocarpa] gi|222844542|gb|EEE82089.1|
           predicted protein [Populus trichocarpa]
          Length = 935

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 54/123 (43%), Positives = 70/123 (56%), Gaps = 13/123 (10%)
 Frame = -2

Query: 334 EPEAIPKVVDLISTVKKLHGLSSLELSKLIRDSRNNTLQLSIENGLSIKIDVEDLAK-IP 158
           EP    +V+DLIS VK+LHGLS  EL+KL+RDS N T+    E G +IKIDVE LA  +P
Sbjct: 23  EPSMAEQVIDLISAVKELHGLSCQELNKLLRDSENFTIHFHSEKGSTIKIDVEKLAGFLP 82

Query: 157 IHLIAKLVQFDLNEAXXXXXXXXXXXXXXLYDIAPWFPKLEQ------------ILLDDI 14
           +HLIA L+  D +E+              L D+AP   KLEQ            +LLDD+
Sbjct: 83  LHLIAVLMSSDRDESLLRYLLCGIRLLHSLCDLAPRNSKLEQLFQVLALGSCFEVLLDDV 142

Query: 13  SLS 5
            +S
Sbjct: 143 KVS 145


Top