BLASTX nr result

ID: Panax21_contig00018935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018935
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22285.3| unnamed protein product [Vitis vinifera]              192   1e-46
ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|2...   187   3e-45
ref|XP_002305375.1| predicted protein [Populus trichocarpa] gi|1...   182   1e-43
ref|XP_003531843.1| PREDICTED: membrane-anchored ubiquitin-fold ...   178   3e-42
ref|XP_002284262.2| PREDICTED: membrane-anchored ubiquitin-fold ...   176   7e-42

>emb|CBI22285.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score =  192 bits (489), Expect = 1e-46
 Identities = 94/117 (80%), Positives = 101/117 (86%)
 Frame = +1

Query: 445 MSGVQDQLEIKFRLTDGSDIGPKSFPAAASVANLKESILAQWPKERENGPKTVKDVKLIS 624
           MSGVQDQLEIKFRLTDGSDIGPKSF AA SVA LKE++LAQWPKE+ENGPKTVKDVKLIS
Sbjct: 1   MSGVQDQLEIKFRLTDGSDIGPKSFSAATSVATLKENVLAQWPKEKENGPKTVKDVKLIS 60

Query: 625 AGRILENNKTLGECRSPLCDIPGGVTTMHVVVQXXXXXXXXXXXNDQKQNKCVCVIL 795
           AG+ILENN+T+GECRSPLCDIPGGVTTMHVVVQ           +  KQNKCVCVIL
Sbjct: 61  AGKILENNRTIGECRSPLCDIPGGVTTMHVVVQPPSSDKEKKVASQPKQNKCVCVIL 117


>ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|222867095|gb|EEF04226.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  187 bits (476), Expect = 3e-45
 Identities = 91/117 (77%), Positives = 101/117 (86%)
 Frame = +1

Query: 445 MSGVQDQLEIKFRLTDGSDIGPKSFPAAASVANLKESILAQWPKERENGPKTVKDVKLIS 624
           M+ VQDQLEIKFRLTDGSDIGPK+FPAA SVA LKE+ILAQWPKE+ENGP+T+KDVKLIS
Sbjct: 1   MAVVQDQLEIKFRLTDGSDIGPKTFPAATSVATLKENILAQWPKEKENGPRTLKDVKLIS 60

Query: 625 AGRILENNKTLGECRSPLCDIPGGVTTMHVVVQXXXXXXXXXXXNDQKQNKCVCVIL 795
           AG+ILENN+T+GECRSPLCDIPGGVTTMHVVVQ           N  KQ+KCVCVIL
Sbjct: 61  AGKILENNRTVGECRSPLCDIPGGVTTMHVVVQPSSVEKGKKGANQAKQSKCVCVIL 117


>ref|XP_002305375.1| predicted protein [Populus trichocarpa] gi|118489660|gb|ABK96631.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222848339|gb|EEE85886.1| predicted protein [Populus
           trichocarpa]
          Length = 117

 Score =  182 bits (463), Expect = 1e-43
 Identities = 87/117 (74%), Positives = 99/117 (84%)
 Frame = +1

Query: 445 MSGVQDQLEIKFRLTDGSDIGPKSFPAAASVANLKESILAQWPKERENGPKTVKDVKLIS 624
           M+GVQDQLEIKFRL DGSDIGPK+FPAA SVA LKE+ILA WPKE+ENGP+T+KDVKLIS
Sbjct: 1   MAGVQDQLEIKFRLADGSDIGPKTFPAATSVATLKENILAHWPKEKENGPRTLKDVKLIS 60

Query: 625 AGRILENNKTLGECRSPLCDIPGGVTTMHVVVQXXXXXXXXXXXNDQKQNKCVCVIL 795
           AG+ILENN+T+GEC+SPLCDIPGGVTTMHVVV            N  +Q+KCVCVIL
Sbjct: 61  AGKILENNRTVGECQSPLCDIPGGVTTMHVVVHPSSVEKEKKAANQPRQSKCVCVIL 117


>ref|XP_003531843.1| PREDICTED: membrane-anchored ubiquitin-fold protein 2-like [Glycine
           max]
          Length = 117

 Score =  178 bits (451), Expect = 3e-42
 Identities = 85/117 (72%), Positives = 96/117 (82%)
 Frame = +1

Query: 445 MSGVQDQLEIKFRLTDGSDIGPKSFPAAASVANLKESILAQWPKERENGPKTVKDVKLIS 624
           M+G QDQ EIKFRLTDGSDIGPKSFPAA S+A LKES+LAQWPK++ENGPKT+KDVKLIS
Sbjct: 1   MAGNQDQFEIKFRLTDGSDIGPKSFPAATSIATLKESVLAQWPKDKENGPKTIKDVKLIS 60

Query: 625 AGRILENNKTLGECRSPLCDIPGGVTTMHVVVQXXXXXXXXXXXNDQKQNKCVCVIL 795
           AG+ILENN+T+GEC+SPLCD P  VTTMHVVVQ           N   QNKC+CVIL
Sbjct: 61  AGKILENNRTVGECQSPLCDTPDTVTTMHVVVQHPATEKEKKAANKATQNKCMCVIL 117


>ref|XP_002284262.2| PREDICTED: membrane-anchored ubiquitin-fold protein 2 [Vitis
           vinifera]
          Length = 132

 Score =  176 bits (445), Expect(2) = 7e-42
 Identities = 84/93 (90%), Positives = 90/93 (96%)
 Frame = +1

Query: 445 MSGVQDQLEIKFRLTDGSDIGPKSFPAAASVANLKESILAQWPKERENGPKTVKDVKLIS 624
           MSGVQDQLEIKFRLTDGSDIGPKSF AA SVA LKE++LAQWPKE+ENGPKTVKDVKLIS
Sbjct: 1   MSGVQDQLEIKFRLTDGSDIGPKSFSAATSVATLKENVLAQWPKEKENGPKTVKDVKLIS 60

Query: 625 AGRILENNKTLGECRSPLCDIPGGVTTMHVVVQ 723
           AG+ILENN+T+GECRSPLCDIPGGVTTMHVVVQ
Sbjct: 61  AGKILENNRTIGECRSPLCDIPGGVTTMHVVVQ 93



 Score = 22.3 bits (46), Expect(2) = 7e-42
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 774 QVCVCYIIKRSWNGNKHIICR 836
           Q+C+CY +  ++ G  +I CR
Sbjct: 112 QMCLCYTMICNFQGWDYIQCR 132


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