BLASTX nr result
ID: Panax21_contig00018916
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00018916 (536 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852... 176 2e-42 emb|CBI17494.3| unnamed protein product [Vitis vinifera] 176 2e-42 ref|XP_002521561.1| replication factor C / DNA polymerase III ga... 167 1e-39 ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|2... 160 9e-38 gb|AFW63535.1| hypothetical protein ZEAMMB73_411986 [Zea mays] 159 2e-37 >ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852980 [Vitis vinifera] Length = 766 Score = 176 bits (447), Expect = 2e-42 Identities = 82/106 (77%), Positives = 93/106 (87%) Frame = -2 Query: 535 IPLGWEETVMDLAAEILADPSPKRLFFIRGKFQRLLVDFVHPKLILQKLIEQFLKGVEAT 356 IPLGWEE +++LAAE+L DPSP RLF++RGK Q+LLVDFVHPKLILQKL+EQFLKG +A+ Sbjct: 660 IPLGWEEVLVELAAEVLVDPSPNRLFYLRGKIQKLLVDFVHPKLILQKLVEQFLKGTDAS 719 Query: 355 LKRELYYWHGYYDKRLPMGTSALLKLEEFVVKFMSIYRKSSSNHQY 218 KR+LYYWH YYDKRLP GTSALLKLEEFV KFMSI RKS N QY Sbjct: 720 QKRDLYYWHAYYDKRLPAGTSALLKLEEFVAKFMSIRRKSLGNRQY 765 >emb|CBI17494.3| unnamed protein product [Vitis vinifera] Length = 708 Score = 176 bits (447), Expect = 2e-42 Identities = 82/106 (77%), Positives = 93/106 (87%) Frame = -2 Query: 535 IPLGWEETVMDLAAEILADPSPKRLFFIRGKFQRLLVDFVHPKLILQKLIEQFLKGVEAT 356 IPLGWEE +++LAAE+L DPSP RLF++RGK Q+LLVDFVHPKLILQKL+EQFLKG +A+ Sbjct: 602 IPLGWEEVLVELAAEVLVDPSPNRLFYLRGKIQKLLVDFVHPKLILQKLVEQFLKGTDAS 661 Query: 355 LKRELYYWHGYYDKRLPMGTSALLKLEEFVVKFMSIYRKSSSNHQY 218 KR+LYYWH YYDKRLP GTSALLKLEEFV KFMSI RKS N QY Sbjct: 662 QKRDLYYWHAYYDKRLPAGTSALLKLEEFVAKFMSIRRKSLGNRQY 707 >ref|XP_002521561.1| replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis] gi|223539239|gb|EEF40832.1| replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis] Length = 779 Score = 167 bits (422), Expect = 1e-39 Identities = 77/105 (73%), Positives = 93/105 (88%) Frame = -2 Query: 535 IPLGWEETVMDLAAEILADPSPKRLFFIRGKFQRLLVDFVHPKLILQKLIEQFLKGVEAT 356 IP WEE +++LAAEIL+DPSPKRLF +RGKFQ+LL+DFVHPKLIL KL+EQFLKGV+A+ Sbjct: 670 IPSSWEEVLIELAAEILSDPSPKRLFMVRGKFQKLLLDFVHPKLILLKLVEQFLKGVDAS 729 Query: 355 LKRELYYWHGYYDKRLPMGTSALLKLEEFVVKFMSIYRKSSSNHQ 221 KRELYYWH YY+KR+P G+SALLKLEEFV KFMS++RK S+ Q Sbjct: 730 SKRELYYWHAYYEKRIPTGSSALLKLEEFVAKFMSLHRKRFSSRQ 774 >ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|222853150|gb|EEE90697.1| predicted protein [Populus trichocarpa] Length = 924 Score = 160 bits (406), Expect = 9e-38 Identities = 80/118 (67%), Positives = 90/118 (76%), Gaps = 12/118 (10%) Frame = -2 Query: 535 IPLGWEETVMDLAAEILADPSPKRLFFIRGKFQRLLVDFVHPKLIL------------QK 392 IP GWEE +++LA EIL DPSP +LF RGK +RLLVDFV+PKLIL QK Sbjct: 806 IPFGWEEVLVELATEILIDPSPNKLFSARGKLKRLLVDFVNPKLILLKYTFLIELHLQQK 865 Query: 391 LIEQFLKGVEATLKRELYYWHGYYDKRLPMGTSALLKLEEFVVKFMSIYRKSSSNHQY 218 L+EQFLKGVEA +RELYYWH YYDKRLP GT+ALLKLEEFV KFMS+YRKSS QY Sbjct: 866 LVEQFLKGVEANSRRELYYWHAYYDKRLPTGTTALLKLEEFVAKFMSMYRKSSGTRQY 923 >gb|AFW63535.1| hypothetical protein ZEAMMB73_411986 [Zea mays] Length = 740 Score = 159 bits (402), Expect = 2e-37 Identities = 75/103 (72%), Positives = 88/103 (85%) Frame = -2 Query: 535 IPLGWEETVMDLAAEILADPSPKRLFFIRGKFQRLLVDFVHPKLILQKLIEQFLKGVEAT 356 IPLGWEE + +LA EIL DP+PKRLF RGK Q+LLV+FV PKLILQKL+E FLKG++ Sbjct: 629 IPLGWEEVLEELAVEILDDPAPKRLFLARGKLQKLLVEFVPPKLILQKLVELFLKGIQTG 688 Query: 355 LKRELYYWHGYYDKRLPMGTSALLKLEEFVVKFMSIYRKSSSN 227 +KRE+YYWH YYDKRLP+G SALLKLEEFV KFMSI+RKS S+ Sbjct: 689 VKREVYYWHAYYDKRLPVGASALLKLEEFVAKFMSIHRKSMSH 731