BLASTX nr result

ID: Panax21_contig00018916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018916
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852...   176   2e-42
emb|CBI17494.3| unnamed protein product [Vitis vinifera]              176   2e-42
ref|XP_002521561.1| replication factor C / DNA polymerase III ga...   167   1e-39
ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|2...   160   9e-38
gb|AFW63535.1| hypothetical protein ZEAMMB73_411986 [Zea mays]        159   2e-37

>ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852980 [Vitis vinifera]
          Length = 766

 Score =  176 bits (447), Expect = 2e-42
 Identities = 82/106 (77%), Positives = 93/106 (87%)
 Frame = -2

Query: 535 IPLGWEETVMDLAAEILADPSPKRLFFIRGKFQRLLVDFVHPKLILQKLIEQFLKGVEAT 356
           IPLGWEE +++LAAE+L DPSP RLF++RGK Q+LLVDFVHPKLILQKL+EQFLKG +A+
Sbjct: 660 IPLGWEEVLVELAAEVLVDPSPNRLFYLRGKIQKLLVDFVHPKLILQKLVEQFLKGTDAS 719

Query: 355 LKRELYYWHGYYDKRLPMGTSALLKLEEFVVKFMSIYRKSSSNHQY 218
            KR+LYYWH YYDKRLP GTSALLKLEEFV KFMSI RKS  N QY
Sbjct: 720 QKRDLYYWHAYYDKRLPAGTSALLKLEEFVAKFMSIRRKSLGNRQY 765


>emb|CBI17494.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  176 bits (447), Expect = 2e-42
 Identities = 82/106 (77%), Positives = 93/106 (87%)
 Frame = -2

Query: 535 IPLGWEETVMDLAAEILADPSPKRLFFIRGKFQRLLVDFVHPKLILQKLIEQFLKGVEAT 356
           IPLGWEE +++LAAE+L DPSP RLF++RGK Q+LLVDFVHPKLILQKL+EQFLKG +A+
Sbjct: 602 IPLGWEEVLVELAAEVLVDPSPNRLFYLRGKIQKLLVDFVHPKLILQKLVEQFLKGTDAS 661

Query: 355 LKRELYYWHGYYDKRLPMGTSALLKLEEFVVKFMSIYRKSSSNHQY 218
            KR+LYYWH YYDKRLP GTSALLKLEEFV KFMSI RKS  N QY
Sbjct: 662 QKRDLYYWHAYYDKRLPAGTSALLKLEEFVAKFMSIRRKSLGNRQY 707


>ref|XP_002521561.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223539239|gb|EEF40832.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 779

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/105 (73%), Positives = 93/105 (88%)
 Frame = -2

Query: 535 IPLGWEETVMDLAAEILADPSPKRLFFIRGKFQRLLVDFVHPKLILQKLIEQFLKGVEAT 356
           IP  WEE +++LAAEIL+DPSPKRLF +RGKFQ+LL+DFVHPKLIL KL+EQFLKGV+A+
Sbjct: 670 IPSSWEEVLIELAAEILSDPSPKRLFMVRGKFQKLLLDFVHPKLILLKLVEQFLKGVDAS 729

Query: 355 LKRELYYWHGYYDKRLPMGTSALLKLEEFVVKFMSIYRKSSSNHQ 221
            KRELYYWH YY+KR+P G+SALLKLEEFV KFMS++RK  S+ Q
Sbjct: 730 SKRELYYWHAYYEKRIPTGSSALLKLEEFVAKFMSLHRKRFSSRQ 774


>ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|222853150|gb|EEE90697.1|
            predicted protein [Populus trichocarpa]
          Length = 924

 Score =  160 bits (406), Expect = 9e-38
 Identities = 80/118 (67%), Positives = 90/118 (76%), Gaps = 12/118 (10%)
 Frame = -2

Query: 535  IPLGWEETVMDLAAEILADPSPKRLFFIRGKFQRLLVDFVHPKLIL------------QK 392
            IP GWEE +++LA EIL DPSP +LF  RGK +RLLVDFV+PKLIL            QK
Sbjct: 806  IPFGWEEVLVELATEILIDPSPNKLFSARGKLKRLLVDFVNPKLILLKYTFLIELHLQQK 865

Query: 391  LIEQFLKGVEATLKRELYYWHGYYDKRLPMGTSALLKLEEFVVKFMSIYRKSSSNHQY 218
            L+EQFLKGVEA  +RELYYWH YYDKRLP GT+ALLKLEEFV KFMS+YRKSS   QY
Sbjct: 866  LVEQFLKGVEANSRRELYYWHAYYDKRLPTGTTALLKLEEFVAKFMSMYRKSSGTRQY 923


>gb|AFW63535.1| hypothetical protein ZEAMMB73_411986 [Zea mays]
          Length = 740

 Score =  159 bits (402), Expect = 2e-37
 Identities = 75/103 (72%), Positives = 88/103 (85%)
 Frame = -2

Query: 535 IPLGWEETVMDLAAEILADPSPKRLFFIRGKFQRLLVDFVHPKLILQKLIEQFLKGVEAT 356
           IPLGWEE + +LA EIL DP+PKRLF  RGK Q+LLV+FV PKLILQKL+E FLKG++  
Sbjct: 629 IPLGWEEVLEELAVEILDDPAPKRLFLARGKLQKLLVEFVPPKLILQKLVELFLKGIQTG 688

Query: 355 LKRELYYWHGYYDKRLPMGTSALLKLEEFVVKFMSIYRKSSSN 227
           +KRE+YYWH YYDKRLP+G SALLKLEEFV KFMSI+RKS S+
Sbjct: 689 VKREVYYWHAYYDKRLPVGASALLKLEEFVAKFMSIHRKSMSH 731


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