BLASTX nr result

ID: Panax21_contig00018915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018915
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
emb|CBI17494.3| unnamed protein product [Vitis vinifera]              451   e-124
ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852...   451   e-124
ref|XP_002521561.1| replication factor C / DNA polymerase III ga...   423   e-116
ref|XP_003538861.1| PREDICTED: uncharacterized protein LOC100795...   412   e-113

>ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|222853150|gb|EEE90697.1|
            predicted protein [Populus trichocarpa]
          Length = 924

 Score =  456 bits (1174), Expect = e-126
 Identities = 226/329 (68%), Positives = 262/329 (79%)
 Frame = +2

Query: 2    VSRQSSNLSDASERTNGSAGKFAANRRKSQTEAWFSCISKGSCRTSKKSPERERAFDEAS 181
            +S  SS +SDAS RT+GS  KF  NR+K QTEAWFSC+ KG C+TSK SP ++R  DE S
Sbjct: 487  LSSDSSKISDASGRTSGSLKKFTENRKKKQTEAWFSCLKKGPCKTSK-SPGKKRC-DETS 544

Query: 182  FIEKAFVVESLRQFWADKHQPASLNGFTCHKQEAQLLKHLVSQEICPHILLKGPPGSGKK 361
            FIEKAFVVESLRQFWADKHQP SLNGFTCHK EAQ+L  LVS +  PHILLKGP GSGKK
Sbjct: 545  FIEKAFVVESLRQFWADKHQPGSLNGFTCHKHEAQILGQLVSHDSIPHILLKGPSGSGKK 604

Query: 362  ALTMAYLREIYGDPAGNISHDLRYFQVQETRSMQXXXXXXXXXXXXELNMHLEPNAKYAL 541
            AL MA + +I+GD   + +HDLRYFQ Q   + Q            E+N++LEPNAK AL
Sbjct: 605  ALAMALIGDIFGDACWHKTHDLRYFQEQRGAA-QVVVPITSSAHHAEINVNLEPNAKTAL 663

Query: 542  MALVKQISSNHAVTPEISNANFKADYTVMVLYDVDKAAENIQHLIKWIMDCYTDVCKLVL 721
            M LVK+I + +A+TP+ SN NFK DY V+VLY+VDKA ENIQ L+KWIMDCYTD CKL+L
Sbjct: 664  MGLVKEIRNTYAITPDFSNVNFKPDYKVLVLYEVDKAPENIQPLMKWIMDCYTDACKLIL 723

Query: 722  CCEDDMGILESVKTRCKVIKVDAPVTHEIMEVLIQIARKENFDISMSFAAKISTKAKQNL 901
            CCEDD  ILE+VK RCKV+KVDAPVTHEIMEVLIQIARKE FD+ M+FAAKI+ K+KQNL
Sbjct: 724  CCEDDSDILETVKNRCKVLKVDAPVTHEIMEVLIQIARKEEFDLPMNFAAKIAAKSKQNL 783

Query: 902  RKAIMALETCKAHNYPFAEDQPIPLGWEE 988
            RKAIMALE CKAHNYPF++DQPIP GWEE
Sbjct: 784  RKAIMALEACKAHNYPFSDDQPIPFGWEE 812


>emb|CBI17494.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  451 bits (1161), Expect = e-124
 Identities = 228/329 (69%), Positives = 268/329 (81%)
 Frame = +2

Query: 2    VSRQSSNLSDASERTNGSAGKFAANRRKSQTEAWFSCISKGSCRTSKKSPERERAFDEAS 181
            VS +SS +SDAS    GS  KF ANRRKS ++AWF+C+ KG C+T +KSPE+ R  DE S
Sbjct: 289  VSTESSKMSDAS----GSLKKFTANRRKSHSDAWFACMRKGPCKT-RKSPEK-RDVDETS 342

Query: 182  FIEKAFVVESLRQFWADKHQPASLNGFTCHKQEAQLLKHLVSQEICPHILLKGPPGSGKK 361
            FI+KA VVE+LRQFWADKH+PASLNGFT HKQEAQLLK LVS +ICPH+L KGP GSGKK
Sbjct: 343  FIQKALVVENLRQFWADKHRPASLNGFTLHKQEAQLLKQLVSSDICPHVLFKGPSGSGKK 402

Query: 362  ALTMAYLREIYGDPAGNISHDLRYFQVQETRSMQXXXXXXXXXXXXELNMHLEPNAKYAL 541
            ALTMA LREIYGD + NISH+LR F VQE R MQ            ELN++LEP A++AL
Sbjct: 403  ALTMALLREIYGDASWNISHELRSFHVQEKRPMQVVVPLTSSAHHVELNVNLEPYARHAL 462

Query: 542  MALVKQISSNHAVTPEISNANFKADYTVMVLYDVDKAAENIQHLIKWIMDCYTDVCKLVL 721
            MA+VKQI SN  +TPE  +       +V+VLY+VDKAAENIQ+LIKWIMDCYTD C+L++
Sbjct: 463  MAIVKQIRSNCEITPEHGSILL---ISVLVLYEVDKAAENIQYLIKWIMDCYTDACQLIM 519

Query: 722  CCEDDMGILESVKTRCKVIKVDAPVTHEIMEVLIQIARKENFDISMSFAAKISTKAKQNL 901
            CCEDD+ +LESVK RCKVIK++APVTHEIMEVLIQIARKE+FD+ MSFAAKI+TK+KQ+L
Sbjct: 520  CCEDDVDVLESVKNRCKVIKLEAPVTHEIMEVLIQIARKEDFDLPMSFAAKIATKSKQDL 579

Query: 902  RKAIMALETCKAHNYPFAEDQPIPLGWEE 988
            RKAIMALE CKAHNYPF +DQPIPLGWEE
Sbjct: 580  RKAIMALEACKAHNYPFLDDQPIPLGWEE 608


>ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852980 [Vitis vinifera]
          Length = 766

 Score =  451 bits (1160), Expect = e-124
 Identities = 227/329 (68%), Positives = 266/329 (80%)
 Frame = +2

Query: 2    VSRQSSNLSDASERTNGSAGKFAANRRKSQTEAWFSCISKGSCRTSKKSPERERAFDEAS 181
            VS +SS +SDAS    GS  KF ANRRKS ++AWF+C+ KG C+T +KSPE+ R  DE S
Sbjct: 355  VSTESSKMSDAS----GSLKKFTANRRKSHSDAWFACMRKGPCKT-RKSPEK-RDVDETS 408

Query: 182  FIEKAFVVESLRQFWADKHQPASLNGFTCHKQEAQLLKHLVSQEICPHILLKGPPGSGKK 361
            FI+KA VVE+LRQFWADKH+PASLNGFT HKQEAQLLK LVS +ICPH+L KGP GSGKK
Sbjct: 409  FIQKALVVENLRQFWADKHRPASLNGFTLHKQEAQLLKQLVSSDICPHVLFKGPSGSGKK 468

Query: 362  ALTMAYLREIYGDPAGNISHDLRYFQVQETRSMQXXXXXXXXXXXXELNMHLEPNAKYAL 541
            ALTMA LREIYGD + N           E R MQ            ELN++LEP A++AL
Sbjct: 469  ALTMALLREIYGDASWN-----------EKRPMQVVVPLTSSAHHVELNVNLEPYARHAL 517

Query: 542  MALVKQISSNHAVTPEISNANFKADYTVMVLYDVDKAAENIQHLIKWIMDCYTDVCKLVL 721
            MA+VKQI SN  +TPE+SN +FKADY V+VLY+VDKAAENIQ+LIKWIMDCYTD C+L++
Sbjct: 518  MAIVKQIRSNCEITPEVSNVDFKADYKVLVLYEVDKAAENIQYLIKWIMDCYTDACQLIM 577

Query: 722  CCEDDMGILESVKTRCKVIKVDAPVTHEIMEVLIQIARKENFDISMSFAAKISTKAKQNL 901
            CCEDD+ +LESVK RCKVIK++APVTHEIMEVLIQIARKE+FD+ MSFAAKI+TK+KQ+L
Sbjct: 578  CCEDDVDVLESVKNRCKVIKLEAPVTHEIMEVLIQIARKEDFDLPMSFAAKIATKSKQDL 637

Query: 902  RKAIMALETCKAHNYPFAEDQPIPLGWEE 988
            RKAIMALE CKAHNYPF +DQPIPLGWEE
Sbjct: 638  RKAIMALEACKAHNYPFLDDQPIPLGWEE 666


>ref|XP_002521561.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223539239|gb|EEF40832.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 779

 Score =  423 bits (1088), Expect = e-116
 Identities = 211/328 (64%), Positives = 252/328 (76%)
 Frame = +2

Query: 5    SRQSSNLSDASERTNGSAGKFAANRRKSQTEAWFSCISKGSCRTSKKSPERERAFDEASF 184
            S +SS +SD S+ T+ S+ +F  NR+KSQ + WFSC+ +G CRT +KSPE+    DE SF
Sbjct: 362  SSESSKISDTSKTTSVSSKRFTENRKKSQADGWFSCMRRGPCRT-RKSPEKHH-LDEVSF 419

Query: 185  IEKAFVVESLRQFWADKHQPASLNGFTCHKQEAQLLKHLVSQEICPHILLKGPPGSGKKA 364
            IEKAFVVESLRQFWADKHQP+SL+GF CHKQEAQLLK LV     PHILLKGP GSGK++
Sbjct: 420  IEKAFVVESLRQFWADKHQPSSLSGFICHKQEAQLLKQLVFHNNIPHILLKGPSGSGKRS 479

Query: 365  LTMAYLREIYGDPAGNISHDLRYFQVQETRSMQXXXXXXXXXXXXELNMHLEPNAKYALM 544
            L MA L EI+G    N           E R+MQ            ELN++LEPNAK+ALM
Sbjct: 480  LAMALLCEIFGGACRN-----------EERAMQVAVPIASSAHHLELNVNLEPNAKHALM 528

Query: 545  ALVKQISSNHAVTPEISNANFKADYTVMVLYDVDKAAENIQHLIKWIMDCYTDVCKLVLC 724
            +LV++IS+N+A+ PE+SNA FK DY V+VLY VDKAAE+IQHLIKWIMDCYTD CKL+LC
Sbjct: 529  SLVREISNNYALAPEVSNATFKPDYKVLVLYQVDKAAEDIQHLIKWIMDCYTDACKLILC 588

Query: 725  CEDDMGILESVKTRCKVIKVDAPVTHEIMEVLIQIARKENFDISMSFAAKISTKAKQNLR 904
            CEDD  ILE V  RC+VIKVD+PVTHEIMEVLIQIARKE F++ M+FAA+I+ K+KQ+LR
Sbjct: 589  CEDDADILEPVTNRCRVIKVDSPVTHEIMEVLIQIARKEEFELPMNFAARIAAKSKQHLR 648

Query: 905  KAIMALETCKAHNYPFAEDQPIPLGWEE 988
            KAIM LE CK HNYPFA+DQPIP  WEE
Sbjct: 649  KAIMTLEACKEHNYPFADDQPIPSSWEE 676


>ref|XP_003538861.1| PREDICTED: uncharacterized protein LOC100795321 [Glycine max]
          Length = 731

 Score =  412 bits (1060), Expect = e-113
 Identities = 208/327 (63%), Positives = 251/327 (76%)
 Frame = +2

Query: 8    RQSSNLSDASERTNGSAGKFAANRRKSQTEAWFSCISKGSCRTSKKSPERERAFDEASFI 187
            + SS  S+AS +T  S  KF ANR+K+Q + WFSC+  G+CRT+KKSPER R  DE+SFI
Sbjct: 317  KPSSVTSEASGKTTASMKKFTANRKKNQKDTWFSCMKTGNCRTTKKSPER-RPIDESSFI 375

Query: 188  EKAFVVESLRQFWADKHQPASLNGFTCHKQEAQLLKHLVSQEICPHILLKGPPGSGKKAL 367
            EKA VVESL QFWADKHQPASLNGF C+K EAQLLK LVSQ  CPHILL GP GSGK+ L
Sbjct: 376  EKAVVVESLPQFWADKHQPASLNGFICNKHEAQLLKELVSQGSCPHILLLGPSGSGKREL 435

Query: 368  TMAYLREIYGDPAGNISHDLRYFQVQETRSMQXXXXXXXXXXXXELNMHLEPNAKYALMA 547
             MA LREIYGD   N    L+   V  T S              EL+++ EPNAKYALM 
Sbjct: 436  AMAILREIYGDACCN-DQRLKKVSVPITSSSHHM----------ELDVNSEPNAKYALMG 484

Query: 548  LVKQISSNHAVTPEISNANFKADYTVMVLYDVDKAAENIQHLIKWIMDCYTDVCKLVLCC 727
            L+K+IS+ +A+ PE+SN NFK+D+ V+VLYDV KA +NIQH+IKWI+D Y+D+CKLVLCC
Sbjct: 485  LIKEISNIYAIAPEVSNINFKSDFKVIVLYDVHKAVDNIQHIIKWIIDRYSDICKLVLCC 544

Query: 728  EDDMGILESVKTRCKVIKVDAPVTHEIMEVLIQIARKENFDISMSFAAKISTKAKQNLRK 907
            EDD  ++E VK R KVI+VDAP  HEI+EVLIQIA+ E  D+S++FAAKI+TK+KQNLRK
Sbjct: 545  EDDADLIEPVKNRFKVIQVDAPQNHEIIEVLIQIAKNEEIDLSVNFAAKIATKSKQNLRK 604

Query: 908  AIMALETCKAHNYPFAEDQPIPLGWEE 988
            AIMALE C AHNYPF+E+QPIP+GWEE
Sbjct: 605  AIMALEACNAHNYPFSEEQPIPVGWEE 631


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