BLASTX nr result
ID: Panax21_contig00018907
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00018907 (405 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI34587.3| unnamed protein product [Vitis vinifera] 131 5e-29 ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II tra... 131 5e-29 ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|2235327... 130 1e-28 ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|2... 128 4e-28 ref|XP_002303692.1| predicted protein [Populus trichocarpa] gi|2... 124 6e-27 >emb|CBI34587.3| unnamed protein product [Vitis vinifera] Length = 284 Score = 131 bits (330), Expect = 5e-29 Identities = 66/89 (74%), Positives = 71/89 (79%) Frame = +3 Query: 138 EDPKQNLDQVINSIQNTLGMLHQLYLTVSSFNVASXXXXXXXXXXXXXXXDKMAKLSEKC 317 EDPKQNL+QVINSIQ TLG+LHQLYLTVSSFNVAS D M KLSEKC Sbjct: 128 EDPKQNLNQVINSIQKTLGLLHQLYLTVSSFNVASQLPLLQRLNALVSELDNMTKLSEKC 187 Query: 318 NIQVPMEVLSLIDDGKNPDEFTREVLNSC 404 NIQVPMEVL+LID+GKNPDEFTR+VLNSC Sbjct: 188 NIQVPMEVLNLIDEGKNPDEFTRDVLNSC 216 >ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II transcription subunit 10 [Vitis vinifera] Length = 194 Score = 131 bits (330), Expect = 5e-29 Identities = 66/89 (74%), Positives = 71/89 (79%) Frame = +3 Query: 138 EDPKQNLDQVINSIQNTLGMLHQLYLTVSSFNVASXXXXXXXXXXXXXXXDKMAKLSEKC 317 EDPKQNL+QVINSIQ TLG+LHQLYLTVSSFNVAS D M KLSEKC Sbjct: 38 EDPKQNLNQVINSIQKTLGLLHQLYLTVSSFNVASQLPLLQRLNALVSELDNMTKLSEKC 97 Query: 318 NIQVPMEVLSLIDDGKNPDEFTREVLNSC 404 NIQVPMEVL+LID+GKNPDEFTR+VLNSC Sbjct: 98 NIQVPMEVLNLIDEGKNPDEFTRDVLNSC 126 >ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|223532724|gb|EEF34504.1| nut2, putative [Ricinus communis] Length = 187 Score = 130 bits (326), Expect = 1e-28 Identities = 64/89 (71%), Positives = 71/89 (79%) Frame = +3 Query: 138 EDPKQNLDQVINSIQNTLGMLHQLYLTVSSFNVASXXXXXXXXXXXXXXXDKMAKLSEKC 317 +DPKQNL+ VINSIQ TLG+LHQLYLTVSSFN AS DKMAKLSEKC Sbjct: 31 DDPKQNLNNVINSIQKTLGLLHQLYLTVSSFNTASQLPLLQRLNGLVLELDKMAKLSEKC 90 Query: 318 NIQVPMEVLSLIDDGKNPDEFTREVLNSC 404 NIQVP+EVL+LIDDGKNPDEFTR+V+NSC Sbjct: 91 NIQVPLEVLNLIDDGKNPDEFTRDVINSC 119 >ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|222846685|gb|EEE84232.1| predicted protein [Populus trichocarpa] Length = 190 Score = 128 bits (322), Expect = 4e-28 Identities = 63/90 (70%), Positives = 71/90 (78%) Frame = +3 Query: 135 LEDPKQNLDQVINSIQNTLGMLHQLYLTVSSFNVASXXXXXXXXXXXXXXXDKMAKLSEK 314 ++DPKQNL+QVINSIQ TLG+LHQLYLTVSSFN AS D M KLSEK Sbjct: 33 VDDPKQNLNQVINSIQKTLGLLHQLYLTVSSFNTASQLPLLQRLNGLVTELDNMVKLSEK 92 Query: 315 CNIQVPMEVLSLIDDGKNPDEFTREVLNSC 404 CNIQVPMEVL+LIDDGKNPDEF+R+V+NSC Sbjct: 93 CNIQVPMEVLNLIDDGKNPDEFSRDVINSC 122 >ref|XP_002303692.1| predicted protein [Populus trichocarpa] gi|222841124|gb|EEE78671.1| predicted protein [Populus trichocarpa] Length = 185 Score = 124 bits (312), Expect = 6e-27 Identities = 62/90 (68%), Positives = 69/90 (76%) Frame = +3 Query: 135 LEDPKQNLDQVINSIQNTLGMLHQLYLTVSSFNVASXXXXXXXXXXXXXXXDKMAKLSEK 314 ++DPKQNL+QVI+SIQ TLG LHQLYLTVSSFN AS D M KLSE+ Sbjct: 28 VDDPKQNLNQVIDSIQKTLGQLHQLYLTVSSFNTASQLPLLQRLNGLVTELDNMVKLSER 87 Query: 315 CNIQVPMEVLSLIDDGKNPDEFTREVLNSC 404 CNIQVPMEVL+LIDDGKNPDEFTR V+NSC Sbjct: 88 CNIQVPMEVLNLIDDGKNPDEFTRGVINSC 117