BLASTX nr result

ID: Panax21_contig00018886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018886
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61200.1| hypothetical protein VITISV_003214 [Vitis vinifera]   514   e-143
ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vini...   513   e-143
ref|XP_003538190.1| PREDICTED: nucleoporin SEH1-like [Glycine max]    485   e-135
ref|XP_003517499.1| PREDICTED: nucleoporin SEH1-like [Glycine max]    485   e-135
ref|XP_002509937.1| nucleotide binding protein, putative [Ricinu...   481   e-133

>emb|CAN61200.1| hypothetical protein VITISV_003214 [Vitis vinifera]
          Length = 325

 Score =  514 bits (1323), Expect = e-143
 Identities = 240/325 (73%), Positives = 273/325 (84%)
 Frame = +3

Query: 93   MEKGLVTLEKGTTCSSWNYCGQRLATGSINGTLXXXXXXXXXXXXXXXXXXXKVHESSIV 272
            MEK LVTL+ GTTCSSWNY G+RLATGS++GTL                   +VHE SIV
Sbjct: 1    MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSSFTCTSRSRVHEDSIV 60

Query: 273  KVVWVPPEYGDAVACICSDGTFSLWEEVAEDSEHVQWKLCKCFDGNSSQVLDIEFGVSLT 452
            KVVWVPPEYGDAV CIC+DGT SLWEEV ED++ +QWKLCK F  NS++VLD++FGVS T
Sbjct: 61   KVVWVPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVSPT 120

Query: 453  SLKLVTAYSDGHVKVYELLDPLELKNWQLQAEFHNVIDSVTKFGKSSCLSASISWNPQRG 632
            SLK+V+AYSDGHVKVYELLDPLELK+WQLQAEF N  DSV+ FGK+ CLSAS+SWNPQRG
Sbjct: 121  SLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQRG 180

Query: 633  ETQQPSFVVGFNSDIAQLNSTKVWEFDLDHQRWVPVAELALPEDKADQVYAVAWAPNIGR 812
            E+QQ SFV+GF+SD  QLNS KVWEFD +HQRW+PVAELAL  DK DQV+ VAWAPNIGR
Sbjct: 181  ESQQSSFVLGFHSDTPQLNSAKVWEFDQNHQRWLPVAELALHGDKGDQVFTVAWAPNIGR 240

Query: 813  PYEVIATATHKGIAIWHIGLNPDPGGRLSVDKVALVSGHDGSAWQMEWDMSGMTLATTGS 992
            PYEV+A ATHKGIAIWH+GLNPD  GRLSV++VAL+SGHDG  WQMEWDMSGMTLATTG 
Sbjct: 241  PYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGMTLATTGG 300

Query: 993  DGMVRLWQSNLNGVWHEQAVIQPTA 1067
            DGMVRLWQSNLNGVWHEQA ++PT+
Sbjct: 301  DGMVRLWQSNLNGVWHEQAALEPTS 325


>ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vinifera]
            gi|297742315|emb|CBI34464.3| unnamed protein product
            [Vitis vinifera]
          Length = 325

 Score =  513 bits (1322), Expect = e-143
 Identities = 239/325 (73%), Positives = 273/325 (84%)
 Frame = +3

Query: 93   MEKGLVTLEKGTTCSSWNYCGQRLATGSINGTLXXXXXXXXXXXXXXXXXXXKVHESSIV 272
            MEK LVTL+ GTTCSSWNY G+RLATGS++GTL                   +VHE S+V
Sbjct: 1    MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSSFTCTSRSRVHEDSVV 60

Query: 273  KVVWVPPEYGDAVACICSDGTFSLWEEVAEDSEHVQWKLCKCFDGNSSQVLDIEFGVSLT 452
            KVVWVPPEYGDAV CIC+DGT SLWEEV ED++ +QWKLCK F  NS++VLD++FGVS T
Sbjct: 61   KVVWVPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVSPT 120

Query: 453  SLKLVTAYSDGHVKVYELLDPLELKNWQLQAEFHNVIDSVTKFGKSSCLSASISWNPQRG 632
            SLK+V+AYSDGHVKVYELLDPLELK+WQLQAEF N  DSV+ FGK+ CLSAS+SWNPQRG
Sbjct: 121  SLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQRG 180

Query: 633  ETQQPSFVVGFNSDIAQLNSTKVWEFDLDHQRWVPVAELALPEDKADQVYAVAWAPNIGR 812
            E+QQ SFV+GF+SD  QLNS KVWEFD +HQRW+PVAELAL  DK DQV+ VAWAPNIGR
Sbjct: 181  ESQQSSFVLGFHSDTPQLNSAKVWEFDQNHQRWLPVAELALHGDKGDQVFTVAWAPNIGR 240

Query: 813  PYEVIATATHKGIAIWHIGLNPDPGGRLSVDKVALVSGHDGSAWQMEWDMSGMTLATTGS 992
            PYEV+A ATHKGIAIWH+GLNPD  GRLSV++VAL+SGHDG  WQMEWDMSGMTLATTG 
Sbjct: 241  PYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGMTLATTGG 300

Query: 993  DGMVRLWQSNLNGVWHEQAVIQPTA 1067
            DGMVRLWQSNLNGVWHEQA ++PT+
Sbjct: 301  DGMVRLWQSNLNGVWHEQAALEPTS 325


>ref|XP_003538190.1| PREDICTED: nucleoporin SEH1-like [Glycine max]
          Length = 326

 Score =  485 bits (1249), Expect = e-135
 Identities = 226/326 (69%), Positives = 269/326 (82%), Gaps = 1/326 (0%)
 Frame = +3

Query: 93   MEKGLVTLEKGTTCSSWNYCGQRLATGSINGTLXXXXXXXXXXXXXXXXXXX-KVHESSI 269
            M K L+TL+ GTTC+SWNY G RLA GS +GTL                    +V E +I
Sbjct: 1    MAKELLTLDNGTTCTSWNYSGTRLAAGSADGTLSIFDSREPPSSSSLRSTFKSRVLEGNI 60

Query: 270  VKVVWVPPEYGDAVACICSDGTFSLWEEVAEDSEHVQWKLCKCFDGNSSQVLDIEFGVSL 449
            VK+VW+PPEYGDAVACI +DG  SLWEEVAEDS+ +QWK+CK F  +SS+VLD++FG+SL
Sbjct: 61   VKIVWIPPEYGDAVACISADGIVSLWEEVAEDSQSLQWKMCKSFGNSSSKVLDVQFGISL 120

Query: 450  TSLKLVTAYSDGHVKVYELLDPLELKNWQLQAEFHNVIDSVTKFGKSSCLSASISWNPQR 629
             SLK+V AYSDG+V+V+EL DPLEL+NWQLQAEF NVI+SV+ FGK+SCLSASISWNPQ+
Sbjct: 121  ASLKMVAAYSDGNVRVFELSDPLELRNWQLQAEFQNVIESVSSFGKASCLSASISWNPQK 180

Query: 630  GETQQPSFVVGFNSDIAQLNSTKVWEFDLDHQRWVPVAELALPEDKADQVYAVAWAPNIG 809
            G +Q+ SF+VGFNS+  +LNS+KVWEFD  HQRW+PVAELALPEDK DQVYAVAWAPNIG
Sbjct: 181  GGSQESSFLVGFNSNTPELNSSKVWEFDQAHQRWLPVAELALPEDKGDQVYAVAWAPNIG 240

Query: 810  RPYEVIATATHKGIAIWHIGLNPDPGGRLSVDKVALVSGHDGSAWQMEWDMSGMTLATTG 989
            RPYE+IA ATHKG+AIWH+GLNPD  GRL V++VAL+SGH+G  WQMEWDMSGMTLATTG
Sbjct: 241  RPYEIIAVATHKGLAIWHLGLNPDHDGRLPVERVALLSGHEGMVWQMEWDMSGMTLATTG 300

Query: 990  SDGMVRLWQSNLNGVWHEQAVIQPTA 1067
             DGMVRLWQSNLNGVWH+QA  +PT+
Sbjct: 301  HDGMVRLWQSNLNGVWHQQAAFEPTS 326


>ref|XP_003517499.1| PREDICTED: nucleoporin SEH1-like [Glycine max]
          Length = 326

 Score =  485 bits (1249), Expect = e-135
 Identities = 225/326 (69%), Positives = 271/326 (83%), Gaps = 1/326 (0%)
 Frame = +3

Query: 93   MEKGLVTLEKGTTCSSWNYCGQRLATGSINGTLXXXXXXXXXXXXXXXXXXX-KVHESSI 269
            M K L+TL+ GTTC+SWNY G RLA GS++GTL                    +V E +I
Sbjct: 1    MAKELLTLDNGTTCTSWNYSGTRLAAGSVDGTLSIFDSRDPPSSSSLHSTFKSRVLEGNI 60

Query: 270  VKVVWVPPEYGDAVACICSDGTFSLWEEVAEDSEHVQWKLCKCFDGNSSQVLDIEFGVSL 449
            VK+VW+PPEYGDAVACI +DG  SLWEEVAEDS+ +QWK+CK F  +SS+VLD +FG+SL
Sbjct: 61   VKIVWIPPEYGDAVACISADGIVSLWEEVAEDSQSLQWKMCKSFGNSSSKVLDAQFGISL 120

Query: 450  TSLKLVTAYSDGHVKVYELLDPLELKNWQLQAEFHNVIDSVTKFGKSSCLSASISWNPQR 629
            TSLK+V AYSDG+V+V+EL DPLEL+NWQLQAEF NVI+SV+ FGK+SCLSASISWNPQ+
Sbjct: 121  TSLKMVAAYSDGNVRVFELSDPLELRNWQLQAEFQNVIESVSSFGKASCLSASISWNPQK 180

Query: 630  GETQQPSFVVGFNSDIAQLNSTKVWEFDLDHQRWVPVAELALPEDKADQVYAVAWAPNIG 809
            G +Q+ SF+VGFNS+ ++LNS+KVWEFD  HQRW+PVAELALPE+K DQ+YAVAWAPNIG
Sbjct: 181  GGSQESSFLVGFNSNTSELNSSKVWEFDQAHQRWLPVAELALPEEKGDQLYAVAWAPNIG 240

Query: 810  RPYEVIATATHKGIAIWHIGLNPDPGGRLSVDKVALVSGHDGSAWQMEWDMSGMTLATTG 989
            RPYE+IA ATHKG+AIWH+GLNPD  GRL V++VAL+SGH+G  WQMEWDMSGMTLATTG
Sbjct: 241  RPYEIIAVATHKGLAIWHLGLNPDHDGRLPVERVALLSGHEGMVWQMEWDMSGMTLATTG 300

Query: 990  SDGMVRLWQSNLNGVWHEQAVIQPTA 1067
             DGMVRLWQSNLNGVWH+QA  +PT+
Sbjct: 301  HDGMVRLWQSNLNGVWHQQAAFEPTS 326


>ref|XP_002509937.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223549836|gb|EEF51324.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 340

 Score =  481 bits (1237), Expect = e-133
 Identities = 227/319 (71%), Positives = 262/319 (82%)
 Frame = +3

Query: 93   MEKGLVTLEKGTTCSSWNYCGQRLATGSINGTLXXXXXXXXXXXXXXXXXXXKVHESSIV 272
            MEK + TL+ GTTCSSWNYCGQRLATGSI+G L                   +VH++ IV
Sbjct: 18   MEKAIATLDTGTTCSSWNYCGQRLATGSIDGYLSIFDPRDPGSSSFTRTSKIRVHDAGIV 77

Query: 273  KVVWVPPEYGDAVACICSDGTFSLWEEVAEDSEHVQWKLCKCFDGNSSQVLDIEFGVSLT 452
            KVVWV PE+GDAVACICSDG+ SLWEEV EDS+ +QWKL + F    ++VLD++FG S T
Sbjct: 78   KVVWVSPEHGDAVACICSDGSLSLWEEVVEDSQ-LQWKLSRSFQSKGNKVLDVQFGFSRT 136

Query: 453  SLKLVTAYSDGHVKVYELLDPLELKNWQLQAEFHNVIDSVTKFGKSSCLSASISWNPQRG 632
             LK+V AYSDG++KVYELLDPLELKNWQLQAEF NVIDSV+ FG++ C SASISWNPQR 
Sbjct: 137  ILKMVVAYSDGNLKVYELLDPLELKNWQLQAEFQNVIDSVSTFGRAICFSASISWNPQRA 196

Query: 633  ETQQPSFVVGFNSDIAQLNSTKVWEFDLDHQRWVPVAELALPEDKADQVYAVAWAPNIGR 812
            E Q  SFV+GFNSD  QLNS+KVWEFD  HQRW+PVAELALP DK+DQV+AVAWAPNIGR
Sbjct: 197  ENQDLSFVLGFNSDTPQLNSSKVWEFDQAHQRWLPVAELALPADKSDQVFAVAWAPNIGR 256

Query: 813  PYEVIATATHKGIAIWHIGLNPDPGGRLSVDKVALVSGHDGSAWQMEWDMSGMTLATTGS 992
            PYEV+A +THKGIAIWH+GLNPD  GRLSV+KVAL+SG +G  WQMEWD+SGMTLATTG+
Sbjct: 257  PYEVLAVSTHKGIAIWHLGLNPDVDGRLSVEKVALLSGFEGEVWQMEWDISGMTLATTGT 316

Query: 993  DGMVRLWQSNLNGVWHEQA 1049
            DG+VRLWQSNLNGVWHEQA
Sbjct: 317  DGVVRLWQSNLNGVWHEQA 335


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