BLASTX nr result

ID: Panax21_contig00018867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018867
         (1788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...   678   0.0  
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]   671   0.0  
ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containi...   643   0.0  
ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|2...   638   e-180
ref|XP_002519054.1| pentatricopeptide repeat-containing protein,...   635   e-179

>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
            mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  678 bits (1749), Expect = 0.0
 Identities = 328/486 (67%), Positives = 408/486 (83%)
 Frame = -2

Query: 1685 QRIIRISKTLIPKLSYIASRSYYTNRHKKLTLYTKISPLGSPSVNLTQELDDWVEKGNKV 1506
            Q I +  ++LI K + I++R+YYT+R+ K++LY KISPLG P+ ++  ELD+WV+ GNKV
Sbjct: 11   QSIQQYPQSLIRK-NPISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKV 69

Query: 1505 RFAELQRIILDLLKRKRFSQALQVSEWMSNKGVCVFSSIEHAVQLDLIGKVDGFLSAESY 1326
              AELQRII DL KRKRFSQAL++SEWMS KG+C FS  EHAVQLDLIG+V GFLSAESY
Sbjct: 70   WVAELQRIIHDLRKRKRFSQALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESY 129

Query: 1325 FNNLKEQDRTDKTYGALLHCYVRQRQTDKALSHLQRMKEIGFALSPLTYNDIMCLYTNTD 1146
            FN+L+  D+TDKTYGALL+CYVRQRQTDK+LSHLQ+MKE+GFA SPLTYNDIMCLYTN  
Sbjct: 130  FNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVG 189

Query: 1145 QNEKVSDVLTDMKKNGVSPDIFSYKICINSYGVRSDIEGIENILKEMESQPHIVMDWSTY 966
            Q+EKV DVLT+MK++ V PD FSY+ICINSYG +SDI+G+EN+LKEME QPHIVMDW+TY
Sbjct: 190  QHEKVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDIQGMENVLKEMERQPHIVMDWNTY 249

Query: 965  AAVANYYIKAGLIDKANDALKKAEERLDNKDGLGHNHLISLHSSLGNTSEVLRMWDLEKS 786
            A  AN+YIKAGL DKA +ALKK+EERLD +DGLG+NHLISL++SLGN +EVLR+W LEKS
Sbjct: 250  AVAANFYIKAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKS 309

Query: 785  ACKRCINKDYIVMMESLARLGDFRECEKLLEEWEASGNCYDFRVPNALIIAYSDKGLYDK 606
            ACKR IN+DYI M+ESL RLG+  E EK+L EWE+SGNCYDFRVPN +II YS+KGL++K
Sbjct: 310  ACKRNINRDYITMLESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEKGLFEK 369

Query: 605  AKGLLEDLVNKGKSTTPNSWERLATGFLEKDEMEKALYCMKAALSLHVESKIWKPNPKSI 426
            A+ +L++L+ KGK TTPNSW  +A+G++++ EMEKA+ CMKAA+SLHV +K  KPN + I
Sbjct: 370  AEAMLKELMEKGKITTPNSWGTVASGYMDEGEMEKAVECMKAAISLHVNNKGRKPNSRVI 429

Query: 425  TSILNSLGEKGSAEDVETFVASLRNVVPLNRQMYHALLKAYSRDGKEVDGLMKRMKADEL 246
              IL+ LG+KG  EDVE FV SLR V+P+NR+MYH L+ A  R GKEVDGL+  MKAD++
Sbjct: 430  AGILSWLGDKGRVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKADKI 489

Query: 245  DEDKET 228
             ED+ET
Sbjct: 490  VEDEET 495


>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
          Length = 506

 Score =  671 bits (1730), Expect = 0.0
 Identities = 325/486 (66%), Positives = 406/486 (83%)
 Frame = -2

Query: 1685 QRIIRISKTLIPKLSYIASRSYYTNRHKKLTLYTKISPLGSPSVNLTQELDDWVEKGNKV 1506
            Q I +  ++LI K + I++R+YYT+R+ K++LY KISPLG P+ ++  ELD+WV+ GNKV
Sbjct: 11   QSIQQYPQSLIRK-NPISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKV 69

Query: 1505 RFAELQRIILDLLKRKRFSQALQVSEWMSNKGVCVFSSIEHAVQLDLIGKVDGFLSAESY 1326
              AELQRII DL KRKRFSQAL++SEWMS KG+C FS  EHAVQLDLIG+V GFLSAESY
Sbjct: 70   WVAELQRIIHDLRKRKRFSQALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESY 129

Query: 1325 FNNLKEQDRTDKTYGALLHCYVRQRQTDKALSHLQRMKEIGFALSPLTYNDIMCLYTNTD 1146
            FN+L+  D+TDKTYGALL+CYVRQRQTDK+LSHLQ+MKE+GFA SPLTYNDIMCLYTN  
Sbjct: 130  FNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVG 189

Query: 1145 QNEKVSDVLTDMKKNGVSPDIFSYKICINSYGVRSDIEGIENILKEMESQPHIVMDWSTY 966
            Q+EKV DVLT+MK++ V PD FSY+ICINSY  +SDI+G+E +LKEME QPHIVMDW+TY
Sbjct: 190  QHEKVPDVLTEMKQSHVYPDNFSYRICINSYAAQSDIQGMEKVLKEMERQPHIVMDWNTY 249

Query: 965  AAVANYYIKAGLIDKANDALKKAEERLDNKDGLGHNHLISLHSSLGNTSEVLRMWDLEKS 786
            A  AN+YIKAGL DKA +ALKK+EERLD +DGLG+NHLISL++SLGN +EVLR+W LEKS
Sbjct: 250  AVAANFYIKAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKS 309

Query: 785  ACKRCINKDYIVMMESLARLGDFRECEKLLEEWEASGNCYDFRVPNALIIAYSDKGLYDK 606
            ACKR IN+DYI M+ESL RLG+  E EK+L EWE+SGNCYDFRVPN +II YS+KGL++K
Sbjct: 310  ACKRNINRDYITMLESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEKGLFEK 369

Query: 605  AKGLLEDLVNKGKSTTPNSWERLATGFLEKDEMEKALYCMKAALSLHVESKIWKPNPKSI 426
            A+ +L++L+ KGK TTP+SW  +A+G++++ EMEKA+ CMKAA+SLHV +K  KPN + I
Sbjct: 370  AEAMLKELMEKGKITTPDSWGTVASGYMDEGEMEKAVECMKAAISLHVNNKGRKPNSRVI 429

Query: 425  TSILNSLGEKGSAEDVETFVASLRNVVPLNRQMYHALLKAYSRDGKEVDGLMKRMKADEL 246
              IL+ LG+KG  EDVE FV SLR V+P+NR+MYH L+ A  R GKEVDGL+  MKAD++
Sbjct: 430  AGILSWLGDKGRVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKADKI 489

Query: 245  DEDKET 228
             ED+ET
Sbjct: 490  VEDEET 495


>ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
            mitochondrial-like [Glycine max]
          Length = 486

 Score =  643 bits (1658), Expect = 0.0
 Identities = 309/477 (64%), Positives = 384/477 (80%)
 Frame = -2

Query: 1658 LIPKLSYIASRSYYTNRHKKLTLYTKISPLGSPSVNLTQELDDWVEKGNKVRFAELQRII 1479
            +I ++  + SRSYYT+R KK +LY+KISPLG+P+ ++   LDDWV KGNK+R AELQRII
Sbjct: 1    MIRRIIAVVSRSYYTSRSKKPSLYSKISPLGNPNTSVVPVLDDWVFKGNKLRVAELQRII 60

Query: 1478 LDLLKRKRFSQALQVSEWMSNKGVCVFSSIEHAVQLDLIGKVDGFLSAESYFNNLKEQDR 1299
             DL KR RFSQALQ+SEWM NKGVC+FS  E+AV LDLIGKV GF SAE+YF+ LK+Q +
Sbjct: 61   RDLRKRSRFSQALQISEWMHNKGVCIFSPTEYAVHLDLIGKVHGFSSAETYFDALKDQHK 120

Query: 1298 TDKTYGALLHCYVRQRQTDKALSHLQRMKEIGFALSPLTYNDIMCLYTNTDQNEKVSDVL 1119
            T+KTYGALL+CYVRQRQTDKALSHLQ+MK++GFA SPLTYNDIMCLYTN  Q+EKV DVL
Sbjct: 121  TNKTYGALLNCYVRQRQTDKALSHLQKMKDLGFASSPLTYNDIMCLYTNIGQHEKVPDVL 180

Query: 1118 TDMKKNGVSPDIFSYKICINSYGVRSDIEGIENILKEMESQPHIVMDWSTYAAVANYYIK 939
             +MK+N V PD FSY+ICINSYGVRSD  G+E +LKEME+QP+IVMDW+TY+  AN+YIK
Sbjct: 181  REMKQNQVLPDNFSYRICINSYGVRSDFGGVERVLKEMETQPNIVMDWNTYSIAANFYIK 240

Query: 938  AGLIDKANDALKKAEERLDNKDGLGHNHLISLHSSLGNTSEVLRMWDLEKSACKRCINKD 759
            AGL   A  AL+K+EERLDNKDG G+NHLISL++ LG  +EV+R+WDLEK+ACKRCIN+D
Sbjct: 241  AGLTRDAVCALRKSEERLDNKDGQGYNHLISLYAQLGLKNEVMRIWDLEKNACKRCINRD 300

Query: 758  YIVMMESLARLGDFRECEKLLEEWEASGNCYDFRVPNALIIAYSDKGLYDKAKGLLEDLV 579
            +  ++ESL +LG+  E EK+L+EWE+S NCYDF +P+ +II YS KGL++KA  +LE+L 
Sbjct: 301  FTTLLESLVKLGELDEAEKILKEWESSDNCYDFGIPSIVIIGYSQKGLHEKALAMLEELQ 360

Query: 578  NKGKSTTPNSWERLATGFLEKDEMEKALYCMKAALSLHVESKIWKPNPKSITSILNSLGE 399
            NK K TTPN W  +A G++ K EMEKA  C K ALSL+VE+K WKPN K I  +L  +G+
Sbjct: 361  NKEKVTTPNCWSIVAGGYIHKGEMEKAFKCFKTALSLYVENKGWKPNAKVIAELLRWIGD 420

Query: 398  KGSAEDVETFVASLRNVVPLNRQMYHALLKAYSRDGKEVDGLMKRMKADELDEDKET 228
             GS ED E  V+ LRN VP+NRQMYH L+K Y R GKEVD L+ RM+ D +DE+KET
Sbjct: 421  NGSVEDAEVLVSLLRNAVPVNRQMYHTLIKTYIRGGKEVDDLLGRMEKDGIDENKET 477


>ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|222848105|gb|EEE85652.1|
            predicted protein [Populus trichocarpa]
          Length = 492

 Score =  638 bits (1645), Expect = e-180
 Identities = 316/481 (65%), Positives = 380/481 (79%)
 Frame = -2

Query: 1670 ISKTLIPKLSYIASRSYYTNRHKKLTLYTKISPLGSPSVNLTQELDDWVEKGNKVRFAEL 1491
            ISKTLI   + I +RSYYTN+  K TLY+KISPLGS + +L  ELD WV  GNKVR AEL
Sbjct: 6    ISKTLIQNQNTIITRSYYTNKANKATLYSKISPLGS-TPSLEPELDSWVRSGNKVRVAEL 64

Query: 1490 QRIILDLLKRKRFSQALQVSEWMSNKGVCVFSSIEHAVQLDLIGKVDGFLSAESYFNNLK 1311
            QRII DL KRKRFS ALQVSEWM  K +C+FS  EHAVQLDLIG+V GF+SAE+YFNNL+
Sbjct: 65   QRIIHDLRKRKRFSHALQVSEWMHKKDICIFSPSEHAVQLDLIGRVHGFVSAENYFNNLR 124

Query: 1310 EQDRTDKTYGALLHCYVRQRQTDKALSHLQRMKEIGFALSPLTYNDIMCLYTNTDQNEKV 1131
            +QD+ +KTYGALL+CYVRQR+TDK++ HLQ+MKE+GFA S LTYNDIMCLYTN  Q+EKV
Sbjct: 125  DQDKNEKTYGALLNCYVRQRETDKSILHLQKMKEMGFAKSSLTYNDIMCLYTNVGQHEKV 184

Query: 1130 SDVLTDMKKNGVSPDIFSYKICINSYGVRSDIEGIENILKEMESQPHIVMDWSTYAAVAN 951
              VL +MK+N V PD FSY++CINS+G R D+EG+E IL EME QP IVMDW+TYA  AN
Sbjct: 185  PQVLNEMKENNVLPDNFSYRLCINSFGARDDLEGMEKILNEMEHQPDIVMDWNTYAVAAN 244

Query: 950  YYIKAGLIDKANDALKKAEERLDNKDGLGHNHLISLHSSLGNTSEVLRMWDLEKSACKRC 771
            +YI   L DKA D LKK+E RLD KDG G+NHLISL++ LGN +EVLR+WDLEKSAC+R 
Sbjct: 245  FYIIGDLTDKAIDTLKKSEARLDKKDGTGYNHLISLYAKLGNKTEVLRLWDLEKSACERH 304

Query: 770  INKDYIVMMESLARLGDFRECEKLLEEWEASGNCYDFRVPNALIIAYSDKGLYDKAKGLL 591
            INKDYI+MMESL +L +F E EK+L+EWE+SGN YD RVPN LII YS KGL +KAK LL
Sbjct: 305  INKDYIIMMESLLKLSEFEEAEKMLKEWESSGNFYDVRVPNTLIIGYSRKGLCEKAKALL 364

Query: 590  EDLVNKGKSTTPNSWERLATGFLEKDEMEKALYCMKAALSLHVESKIWKPNPKSITSILN 411
            E+L  KGK T PNSW  +A GF +K E+ KA  CMKAAL L+VE+K WKPN + I  IL+
Sbjct: 365  ENLTEKGKMTLPNSWGIVAAGFFDKSEVAKAFSCMKAALCLYVENKGWKPNQRVINGILS 424

Query: 410  SLGEKGSAEDVETFVASLRNVVPLNRQMYHALLKAYSRDGKEVDGLMKRMKADELDEDKE 231
             LG++GSAED E FV+SL+ V+P+NR+MYHA+LKA  R GKEV  L+  MK   + ED+E
Sbjct: 425  WLGDEGSAEDAEAFVSSLKTVIPVNREMYHAVLKANIRAGKEVHRLLDGMKTYNIKEDEE 484

Query: 230  T 228
            T
Sbjct: 485  T 485


>ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541717|gb|EEF43265.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 485

 Score =  635 bits (1637), Expect = e-179
 Identities = 303/468 (64%), Positives = 378/468 (80%)
 Frame = -2

Query: 1631 SRSYYTNRHKKLTLYTKISPLGSPSVNLTQELDDWVEKGNKVRFAELQRIILDLLKRKRF 1452
            SR YY NR KK+TLY+KISPLG P+ +L  ELD+WV+ GNKVR  ELQRII DL KR RF
Sbjct: 3    SRYYYANRTKKVTLYSKISPLGDPNTSLVPELDNWVQDGNKVRVGELQRIIRDLRKRNRF 62

Query: 1451 SQALQVSEWMSNKGVCVFSSIEHAVQLDLIGKVDGFLSAESYFNNLKEQDRTDKTYGALL 1272
            +QAL+VSEWM+ KG+C+FSS EHAVQLDLIGKV GFLSAE+YFNNL + D+TDKTYGALL
Sbjct: 63   TQALEVSEWMNKKGICIFSSTEHAVQLDLIGKVRGFLSAENYFNNLMDHDKTDKTYGALL 122

Query: 1271 HCYVRQRQTDKALSHLQRMKEIGFALSPLTYNDIMCLYTNTDQNEKVSDVLTDMKKNGVS 1092
            +CYVRQRQTD+++SH Q+MKE+G A SPL YNDIMCLY N    EKV  VLT+MK+N +S
Sbjct: 123  NCYVRQRQTDRSISHWQKMKEMGLASSPLAYNDIMCLYINLGLYEKVLHVLTEMKENKIS 182

Query: 1091 PDIFSYKICINSYGVRSDIEGIENILKEMESQPHIVMDWSTYAAVANYYIKAGLIDKAND 912
            PD FSY+ICINSYG RSDI+G+E +L EME +    MDW+TYA VAN+YIKAGL DKA D
Sbjct: 183  PDNFSYRICINSYGARSDIQGMEKVLNEMECRLGNAMDWNTYAVVANFYIKAGLADKAVD 242

Query: 911  ALKKAEERLDNKDGLGHNHLISLHSSLGNTSEVLRMWDLEKSACKRCINKDYIVMMESLA 732
            AL+K+EE+LD KDG+G+NHLISL+++LG  SEVLR+WDL+KS CKR IN+D++ M+ESL 
Sbjct: 243  ALRKSEEKLDKKDGIGYNHLISLYATLGIKSEVLRIWDLQKSVCKRRINRDFVTMLESLV 302

Query: 731  RLGDFRECEKLLEEWEASGNCYDFRVPNALIIAYSDKGLYDKAKGLLEDLVNKGKSTTPN 552
            +LGD  E EK+L+EWE+SGN YD R+PN +++ YS  GL++KA+  LE L+ KG++TTPN
Sbjct: 303  KLGDLEEAEKVLKEWESSGNFYDVRIPNIVVVGYSKNGLHEKAEASLEALMEKGRATTPN 362

Query: 551  SWERLATGFLEKDEMEKALYCMKAALSLHVESKIWKPNPKSITSILNSLGEKGSAEDVET 372
            SW  +A+G+LEK E  KA  CMKAA SL+VE K WKPNP+ +  IL  LG++GS EDVE 
Sbjct: 363  SWAMIASGYLEKGEKAKAFECMKAAFSLNVEKKGWKPNPRVVMDILIWLGDEGSPEDVEA 422

Query: 371  FVASLRNVVPLNRQMYHALLKAYSRDGKEVDGLMKRMKADELDEDKET 228
            FVASL   +PLNRQ+YHALLKA  R G++   ++ RMK D++DED+ET
Sbjct: 423  FVASLSVAIPLNRQIYHALLKAKIRSGRDAHEILDRMKTDKIDEDEET 470


Top