BLASTX nr result

ID: Panax21_contig00018861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018861
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [...   394   e-107
ref|XP_002510436.1| conserved hypothetical protein [Ricinus comm...   385   e-105
ref|XP_002300750.1| predicted protein [Populus trichocarpa] gi|1...   385   e-105
gb|ABB86268.1| Tic20-like protein [Solanum tuberosum]                 382   e-103
ref|XP_002307678.1| predicted protein [Populus trichocarpa] gi|1...   369   e-100

>ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [Vitis vinifera]
           gi|302142547|emb|CBI19750.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  394 bits (1012), Expect = e-107
 Identities = 186/270 (68%), Positives = 216/270 (80%)
 Frame = -2

Query: 889 NMILNGCSLKSGGVCSMAPKSYYSAPGCLTRVPVKVASPSIRSSWEPNRKLKFGSFKGIQ 710
           +++ +GC+L     C   P + +    C   +P + AS SIRSSW P ++LK  SF G+ 
Sbjct: 6   SVMTSGCALMDSRACK--PVTSHQVFACFPHLPARTASLSIRSSWRPCQELKSWSFGGMP 63

Query: 709 SRCLSAGSSPLLNGDLCGLSHAISRIPTRRRSVISPRAAKDVPSSYRYPAMTKKPQWWWR 530
              LSA S+PLL+GD  GLSH +  +P R RS    RA+KDVP S+RYP MTKKPQWWWR
Sbjct: 64  LSHLSAASTPLLSGDQGGLSHTLPMLPRRPRSPTPLRASKDVPYSFRYPPMTKKPQWWWR 123

Query: 529 SLACLPYLMPLHETWMYAETAYHLHPFLEEFEFLTYPFLEVIGKLPSWFLIAYFLVAYLG 350
           +LACLPYLMPLHETWMYAETAYHLHPFLE+FEF+TYPFLE IG+LPSW L+AYF +AYLG
Sbjct: 124 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFVTYPFLEFIGRLPSWSLMAYFFIAYLG 183

Query: 349 IVRRKEWPHFFRFHVVMGMLLEISLQVIGTISRRWLPRAVYWGKVGMHFWTAFAFAYLFT 170
           +VR+KEWPHFFRFHVVMGMLLEI+LQVIGTIS RW+P AVYWGKVGMHFWTA AF YLFT
Sbjct: 184 VVRKKEWPHFFRFHVVMGMLLEIALQVIGTIS-RWMPLAVYWGKVGMHFWTAVAFGYLFT 242

Query: 169 ILESMRCALAGMYNDIPFVSDAAYIQIPYD 80
           +LE +RCALAGMY DIPFV DAAYIQIPYD
Sbjct: 243 VLECIRCALAGMYADIPFVCDAAYIQIPYD 272


>ref|XP_002510436.1| conserved hypothetical protein [Ricinus communis]
           gi|223551137|gb|EEF52623.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  385 bits (989), Expect = e-105
 Identities = 189/279 (67%), Positives = 215/279 (77%), Gaps = 10/279 (3%)
 Frame = -2

Query: 886 MILNGCSLKSGG--------VCSMAPKSYYSAPGCLTRVPVKVASPSIRSSWEP--NRKL 737
           MILNGC + S           C   P S  SA  C+ R+  K A   IR+S  P  N + 
Sbjct: 1   MILNGCIVPSTSGYALINTRTCKPWPNSLVSA--CVPRLTTKAAFLDIRNSCTPVPNLES 58

Query: 736 KFGSFKGIQSRCLSAGSSPLLNGDLCGLSHAISRIPTRRRSVISPRAAKDVPSSYRYPAM 557
           KF   +G+    LSA S+PLL+GD  G+ HAI   P +RR  + PRA+KDVP S+RYP M
Sbjct: 59  KFWLSRGLPFLSLSAASTPLLSGDQGGIWHAIPSFPRQRRCYLCPRASKDVPYSFRYPPM 118

Query: 556 TKKPQWWWRSLACLPYLMPLHETWMYAETAYHLHPFLEEFEFLTYPFLEVIGKLPSWFLI 377
           TKKP+WWWR+LACLPYLMPLHETWMYAETAYHLHPFLE+FEFLTYPFL  IG+LPSWFL+
Sbjct: 119 TKKPKWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLM 178

Query: 376 AYFLVAYLGIVRRKEWPHFFRFHVVMGMLLEISLQVIGTISRRWLPRAVYWGKVGMHFWT 197
           AYF VAYLG+VRRKEWPHFFRFHVVMGMLLEI+LQVIGT+S RW+P AVYWGKVGMHFWT
Sbjct: 179 AYFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVS-RWMPLAVYWGKVGMHFWT 237

Query: 196 AFAFAYLFTILESMRCALAGMYNDIPFVSDAAYIQIPYD 80
           A AFAYLFT+LE +RCALAGMY D+PF  DAAYIQIPYD
Sbjct: 238 AIAFAYLFTVLECIRCALAGMYADVPFACDAAYIQIPYD 276


>ref|XP_002300750.1| predicted protein [Populus trichocarpa] gi|118482844|gb|ABK93337.1|
           unknown [Populus trichocarpa]
           gi|222842476|gb|EEE80023.1| predicted protein [Populus
           trichocarpa]
          Length = 272

 Score =  385 bits (989), Expect = e-105
 Identities = 186/274 (67%), Positives = 218/274 (79%), Gaps = 5/274 (1%)
 Frame = -2

Query: 886 MILNGCSLKSGGVCSMAPKSYYSAPGCLT--RVPVKVASPSI---RSSWEPNRKLKFGSF 722
           MILNGC++ SG   S + ++  + PG +    VP   A  ++   R+S E + + K  S 
Sbjct: 1   MILNGCAMPSGSAFS-STRTCKTMPGIMVSDHVPYTTARAALLSSRASLERHLESKSWSS 59

Query: 721 KGIQSRCLSAGSSPLLNGDLCGLSHAISRIPTRRRSVISPRAAKDVPSSYRYPAMTKKPQ 542
           +G  S  LSA S+PLL+GD CG SH I   P +RRS   PRA+KDVP S+R+P MTKKP+
Sbjct: 60  RGFLSLHLSAASTPLLSGDYCGFSHYIPTFPRQRRSYSCPRASKDVPYSFRFPPMTKKPR 119

Query: 541 WWWRSLACLPYLMPLHETWMYAETAYHLHPFLEEFEFLTYPFLEVIGKLPSWFLIAYFLV 362
           WWWR+LACLPYLMPLHETWMYAETAYHLHPFLE+FEFLTYPFL  IG+LPSWFL+AYF V
Sbjct: 120 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 179

Query: 361 AYLGIVRRKEWPHFFRFHVVMGMLLEISLQVIGTISRRWLPRAVYWGKVGMHFWTAFAFA 182
           AYLG+VRRKEWPHFFRFHVVMGMLLEI+LQVIGT+S RW+P AVYWGK+GMHFWTA AFA
Sbjct: 180 AYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVS-RWMPLAVYWGKLGMHFWTAVAFA 238

Query: 181 YLFTILESMRCALAGMYNDIPFVSDAAYIQIPYD 80
           YLFT+LE +RCALAGMY D+PF  DAAYIQIPYD
Sbjct: 239 YLFTVLECIRCALAGMYADVPFACDAAYIQIPYD 272


>gb|ABB86268.1| Tic20-like protein [Solanum tuberosum]
          Length = 271

 Score =  382 bits (980), Expect = e-103
 Identities = 188/273 (68%), Positives = 216/273 (79%), Gaps = 4/273 (1%)
 Frame = -2

Query: 886 MILNGCSLKSGGVC----SMAPKSYYSAPGCLTRVPVKVASPSIRSSWEPNRKLKFGSFK 719
           MILNGC L +GG+C    +   KSY SA  C      KV    ++ S  P++     S K
Sbjct: 1   MILNGCYLSTGGICKPYKACNSKSYLSASSCTPLPLSKVIVTCVKRSPAPHQYPTSCS-K 59

Query: 718 GIQSRCLSAGSSPLLNGDLCGLSHAISRIPTRRRSVISPRAAKDVPSSYRYPAMTKKPQW 539
           G     LS+ SS LL+G+  GLS+AI ++P R +   SPRA+KDVP SYR+P MTKKP+W
Sbjct: 60  GFSFLDLSSASSLLLSGEYGGLSNAIPQLPRRSQLSFSPRASKDVPYSYRFPPMTKKPRW 119

Query: 538 WWRSLACLPYLMPLHETWMYAETAYHLHPFLEEFEFLTYPFLEVIGKLPSWFLIAYFLVA 359
           WWR+LACLPYLMPLHETWMYAETAYHLHPFLE+ EFLTYPFL  IG+LPSWFL+AYF VA
Sbjct: 120 WWRTLACLPYLMPLHETWMYAETAYHLHPFLEDLEFLTYPFLGAIGRLPSWFLMAYFFVA 179

Query: 358 YLGIVRRKEWPHFFRFHVVMGMLLEISLQVIGTISRRWLPRAVYWGKVGMHFWTAFAFAY 179
           YLGIVRRKEWPHF+RFHVV+GMLLEI+LQVIGTIS RW+P AVYWGKVGMHFWTA AFAY
Sbjct: 180 YLGIVRRKEWPHFYRFHVVIGMLLEIALQVIGTIS-RWMPLAVYWGKVGMHFWTAVAFAY 238

Query: 178 LFTILESMRCALAGMYNDIPFVSDAAYIQIPYD 80
           LFT+LES+RCALAGMY D+PFV DAAYIQIPYD
Sbjct: 239 LFTVLESIRCALAGMYADVPFVCDAAYIQIPYD 271


>ref|XP_002307678.1| predicted protein [Populus trichocarpa] gi|118487446|gb|ABK95551.1|
           unknown [Populus trichocarpa]
           gi|222857127|gb|EEE94674.1| predicted protein [Populus
           trichocarpa]
          Length = 272

 Score =  369 bits (946), Expect = e-100
 Identities = 183/276 (66%), Positives = 207/276 (75%), Gaps = 7/276 (2%)
 Frame = -2

Query: 886 MILNGCSLKSGG------VCSMAPKSYYSAP-GCLTRVPVKVASPSIRSSWEPNRKLKFG 728
           M+LN C++ SG        C   P    SA   C T    + A  + R+S       K  
Sbjct: 1   MLLNDCTMPSGSGFTNTRACKTMPGIVVSASVPCTT---ARAALLNSRASLGRQLDSKSW 57

Query: 727 SFKGIQSRCLSAGSSPLLNGDLCGLSHAISRIPTRRRSVISPRAAKDVPSSYRYPAMTKK 548
           S +G+ S  LSA S PLL+GD    SH I   P +RRS   PRA+KDVP SYR+P MTKK
Sbjct: 58  SSRGLPSLLLSAASMPLLSGDYGRFSHNIPTYPRQRRSYSCPRASKDVPYSYRFPPMTKK 117

Query: 547 PQWWWRSLACLPYLMPLHETWMYAETAYHLHPFLEEFEFLTYPFLEVIGKLPSWFLIAYF 368
           P WWWR+LACLPYLMPLHETWMYAETAYHLHPFLE+FEFLTYPFL  IG+LPSWFL+AYF
Sbjct: 118 PGWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYF 177

Query: 367 LVAYLGIVRRKEWPHFFRFHVVMGMLLEISLQVIGTISRRWLPRAVYWGKVGMHFWTAFA 188
            VAYLG+VRRKEWPHFFRFHVVMGMLLEI+LQVIGT+S RW+P AVYWGK+GMHFWTA A
Sbjct: 178 FVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVS-RWMPLAVYWGKLGMHFWTAVA 236

Query: 187 FAYLFTILESMRCALAGMYNDIPFVSDAAYIQIPYD 80
           FAYLFT+LE +RCALAGMY D+PF  DAAYIQIPYD
Sbjct: 237 FAYLFTVLECIRCALAGMYADVPFACDAAYIQIPYD 272


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