BLASTX nr result
ID: Panax21_contig00018828
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00018828 (786 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup1... 73 6e-11 ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup1... 73 6e-11 gb|AAF79236.1|AC006917_21 F10B6.25 [Arabidopsis thaliana] 73 8e-11 ref|NP_172938.2| nucleoporin 155 [Arabidopsis thaliana] gi|33219... 73 8e-11 ref|XP_004164793.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore... 72 1e-10 >ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max] Length = 1486 Score = 73.2 bits (178), Expect = 6e-11 Identities = 35/44 (79%), Positives = 39/44 (88%) Frame = +2 Query: 653 VCRLSTRAMQVLEDKLRSLEKFLRSRRKQKKGLYGCVADVGDLT 784 VCRLS AMQVLE KLRSLEKFLRSRR Q++GLYGCVA +GDL+ Sbjct: 692 VCRLSVGAMQVLEQKLRSLEKFLRSRRNQRRGLYGCVAGLGDLS 735 >ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max] Length = 1485 Score = 73.2 bits (178), Expect = 6e-11 Identities = 35/44 (79%), Positives = 39/44 (88%) Frame = +2 Query: 653 VCRLSTRAMQVLEDKLRSLEKFLRSRRKQKKGLYGCVADVGDLT 784 VCRLS AMQVLE KLRSLEKFLRSRR Q++GLYGCVA +GDL+ Sbjct: 692 VCRLSVGAMQVLEQKLRSLEKFLRSRRNQRRGLYGCVAGLGDLS 735 >gb|AAF79236.1|AC006917_21 F10B6.25 [Arabidopsis thaliana] Length = 1475 Score = 72.8 bits (177), Expect = 8e-11 Identities = 33/44 (75%), Positives = 39/44 (88%) Frame = +2 Query: 653 VCRLSTRAMQVLEDKLRSLEKFLRSRRKQKKGLYGCVADVGDLT 784 +CRLST AM VLE K+RSLEKFLRSRR Q++GLYGCVA +GD+T Sbjct: 690 ICRLSTSAMHVLESKIRSLEKFLRSRRNQRRGLYGCVAGLGDVT 733 >ref|NP_172938.2| nucleoporin 155 [Arabidopsis thaliana] gi|332191114|gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] Length = 1464 Score = 72.8 bits (177), Expect = 8e-11 Identities = 33/44 (75%), Positives = 39/44 (88%) Frame = +2 Query: 653 VCRLSTRAMQVLEDKLRSLEKFLRSRRKQKKGLYGCVADVGDLT 784 +CRLST AM VLE K+RSLEKFLRSRR Q++GLYGCVA +GD+T Sbjct: 690 ICRLSTSAMHVLESKIRSLEKFLRSRRNQRRGLYGCVAGLGDVT 733 >ref|XP_004164793.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore complex protein Nup155-like, partial [Cucumis sativus] Length = 1304 Score = 72.4 bits (176), Expect = 1e-10 Identities = 33/44 (75%), Positives = 40/44 (90%) Frame = +2 Query: 653 VCRLSTRAMQVLEDKLRSLEKFLRSRRKQKKGLYGCVADVGDLT 784 VCRLS AMQ+LE+KLR+LEKFLRSRR Q++GLYGCVA +GD+T Sbjct: 691 VCRLSAGAMQILENKLRALEKFLRSRRNQRRGLYGCVAGLGDVT 734