BLASTX nr result

ID: Panax21_contig00018826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018826
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatu...   227   2e-57
ref|XP_003539043.1| PREDICTED: uncharacterized protein LOC100817...   226   4e-57
ref|NP_001240083.1| uncharacterized protein LOC100782419 [Glycin...   226   5e-57
ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [V...   226   5e-57
gb|AFK36091.1| unknown [Lotus japonicus]                              224   1e-56

>ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatula]
           gi|217071060|gb|ACJ83890.1| unknown [Medicago
           truncatula] gi|355487511|gb|AES68714.1| 50S ribosomal
           protein L27 [Medicago truncatula]
           gi|388495594|gb|AFK35863.1| unknown [Medicago
           truncatula] gi|388500166|gb|AFK38149.1| unknown
           [Medicago truncatula]
          Length = 148

 Score =  227 bits (578), Expect = 2e-57
 Identities = 105/134 (78%), Positives = 118/134 (88%)
 Frame = -2

Query: 625 MNFATSLCRRLNLRELISDIPVYXXXXXXXXXXXXXXLRRWASKKTAGSTKNGRDSKPKN 446
           MNFA+SLCRRLN++EL++++PVY               RRWA+KKTAGSTKNGRDSKPKN
Sbjct: 1   MNFASSLCRRLNIKELVTNVPVYRSTADVSGEGLSLVFRRWATKKTAGSTKNGRDSKPKN 60

Query: 445 LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKEGCVKFERHKLSGRKWV 266
           LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVG+GKDHTLFALKEG VKFER+KL+GRKWV
Sbjct: 61  LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGWVKFERNKLTGRKWV 120

Query: 265 HVEPKEGHVLHPIY 224
           HVEPKEGHVLHP++
Sbjct: 121 HVEPKEGHVLHPVF 134


>ref|XP_003539043.1| PREDICTED: uncharacterized protein LOC100817864 [Glycine max]
          Length = 285

 Score =  226 bits (576), Expect = 4e-57
 Identities = 110/155 (70%), Positives = 123/155 (79%), Gaps = 8/155 (5%)
 Frame = -2

Query: 664 LPISQLLHTHRS--------MMNFATSLCRRLNLRELISDIPVYXXXXXXXXXXXXXXLR 509
           L  S  +H+ RS         MNFA SLCRRLN++EL++ +PVY               R
Sbjct: 118 LTSSSCIHSPRSGVFLSIANSMNFAASLCRRLNIKELVTYVPVYRSTSGVSGEGLNLAFR 177

Query: 508 RWASKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTL 329
           RWASKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVG+GKDH+L
Sbjct: 178 RWASKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHSL 237

Query: 328 FALKEGCVKFERHKLSGRKWVHVEPKEGHVLHPIY 224
           FALKEG VKFER+KL+GRKWVH+EPKEGHVLHP+Y
Sbjct: 238 FALKEGWVKFERNKLTGRKWVHIEPKEGHVLHPLY 272


>ref|NP_001240083.1| uncharacterized protein LOC100782419 [Glycine max]
           gi|255638454|gb|ACU19536.1| unknown [Glycine max]
           gi|255638528|gb|ACU19572.1| unknown [Glycine max]
          Length = 147

 Score =  226 bits (575), Expect = 5e-57
 Identities = 106/134 (79%), Positives = 116/134 (86%)
 Frame = -2

Query: 625 MNFATSLCRRLNLRELISDIPVYXXXXXXXXXXXXXXLRRWASKKTAGSTKNGRDSKPKN 446
           MNFA SLCRRLN++EL +++PVY               RRWASKKTAGSTKNGRDSKPKN
Sbjct: 1   MNFAASLCRRLNIKELATNVPVYKSTSDVSGEGLSFTFRRWASKKTAGSTKNGRDSKPKN 60

Query: 445 LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKEGCVKFERHKLSGRKWV 266
           LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVG+GKDH+LFALKEG VKFER+KL+GRKWV
Sbjct: 61  LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHSLFALKEGWVKFERNKLTGRKWV 120

Query: 265 HVEPKEGHVLHPIY 224
           HVEPKEGHVLHP+Y
Sbjct: 121 HVEPKEGHVLHPLY 134


>ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [Vitis vinifera]
          Length = 146

 Score =  226 bits (575), Expect = 5e-57
 Identities = 103/134 (76%), Positives = 115/134 (85%)
 Frame = -2

Query: 625 MNFATSLCRRLNLRELISDIPVYXXXXXXXXXXXXXXLRRWASKKTAGSTKNGRDSKPKN 446
           MN AT  C+R+N++EL++++PVY                RWASKKTAGSTKNGRDSKPKN
Sbjct: 1   MNLATLFCKRMNIKELVTNLPVYRSASDVSGEGLGLIFMRWASKKTAGSTKNGRDSKPKN 60

Query: 445 LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKEGCVKFERHKLSGRKWV 266
           LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTL+ALKEGCVKFE+HKLSGRKWV
Sbjct: 61  LGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALKEGCVKFEKHKLSGRKWV 120

Query: 265 HVEPKEGHVLHPIY 224
           HVEPK+GHVLHP+Y
Sbjct: 121 HVEPKDGHVLHPVY 134


>gb|AFK36091.1| unknown [Lotus japonicus]
          Length = 181

 Score =  224 bits (572), Expect = 1e-56
 Identities = 105/138 (76%), Positives = 116/138 (84%)
 Frame = -2

Query: 637 HRSMMNFATSLCRRLNLRELISDIPVYXXXXXXXXXXXXXXLRRWASKKTAGSTKNGRDS 458
           H   MNF  SLCRRL+++EL++++PVY                RWASKKTAGSTKNGRDS
Sbjct: 32  HIENMNFGASLCRRLSIKELVTNVPVYRSTGDVSGEGLSMVFSRWASKKTAGSTKNGRDS 91

Query: 457 KPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKEGCVKFERHKLSG 278
           KPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALK+G VKFER+KL+G
Sbjct: 92  KPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALKQGLVKFERNKLTG 151

Query: 277 RKWVHVEPKEGHVLHPIY 224
           RKWVHVEPKEGHVLHP+Y
Sbjct: 152 RKWVHVEPKEGHVLHPVY 169


Top