BLASTX nr result

ID: Panax21_contig00018825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018825
         (1340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306262.1| predicted protein [Populus trichocarpa] gi|2...   583   e-164
ref|XP_002266834.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...   582   e-163
ref|XP_002309925.1| predicted protein [Populus trichocarpa] gi|1...   581   e-163
ref|XP_002516315.1| copine, putative [Ricinus communis] gi|22354...   572   e-161
ref|XP_003525130.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...   565   e-159

>ref|XP_002306262.1| predicted protein [Populus trichocarpa] gi|222855711|gb|EEE93258.1|
            predicted protein [Populus trichocarpa]
          Length = 351

 Score =  583 bits (1502), Expect = e-164
 Identities = 282/354 (79%), Positives = 316/354 (89%), Gaps = 3/354 (0%)
 Frame = -1

Query: 1187 HIADNYDSVKQVVSALREAGLESSNLILGIDFTKSNEWTGKYSFSRKSLHAIGSTPNPYE 1008
            +IADN++S+ QV+S+LREAGLESSNLILGIDFTKSNEWTG++SF RKSLHAIGST NPYE
Sbjct: 2    YIADNFNSLDQVISSLREAGLESSNLILGIDFTKSNEWTGRHSFHRKSLHAIGSTLNPYE 61

Query: 1007 QAINIIGRTLTPFDEDNLIPCFGFGDASTHDRCVFSFYPDNRPCHGFEEALARYREILPY 828
            QAI+IIGRTL+PFDEDNLIPCFGFGDASTHD+ VFSFYPDNRPC+G EEAL RYREI+P+
Sbjct: 62   QAISIIGRTLSPFDEDNLIPCFGFGDASTHDKHVFSFYPDNRPCNGLEEALTRYREIVPH 121

Query: 827  LNLSGPTSFAPIIDAAIDIVERSNGQYHVLVIIADGQVTRSPDTPPGRFSPQEQATVNSI 648
            L LSGPTSFAPIIDAAIDIVE+S GQYHVLV+IADGQVTR PDTPPGRFSPQE ATVNSI
Sbjct: 122  LKLSGPTSFAPIIDAAIDIVEKSGGQYHVLVVIADGQVTRGPDTPPGRFSPQEHATVNSI 181

Query: 647  VAASEYPLSIILVGVGDGPWDAMQEFDDNIPQRAFDNFQFVNFTKIMSEHTHMSKKEAAF 468
            VAAS+YP+SIILVGVGDGPWDAMQ+FDDNIPQRAFDNFQFVNFTKIMS++T  SKKE AF
Sbjct: 182  VAASKYPISIILVGVGDGPWDAMQQFDDNIPQRAFDNFQFVNFTKIMSDNTEASKKETAF 241

Query: 467  SLAALMEIPLQYRATQSHQYIEKLGGQRTNPLPPPREVIDHDNAVKSVPRMTSVDSNETM 288
            +LAALMEIPLQYRATQ+ Q    LGG  T  LPPPREVIDHDNAVKS+P MT+    +  
Sbjct: 242  ALAALMEIPLQYRATQTLQ----LGGPHTRLLPPPREVIDHDNAVKSIPHMTNFKPVQPT 297

Query: 287  AP---VEQVCPICLTNPKDMAFGCGHLTCKECGVTLLLCPLCREPIRTRLRLFS 135
            AP   VE VCPICL NPKD+AFGCGH+TC++CG ++  CPLCR+PI TRLRLF+
Sbjct: 298  APTASVEPVCPICLANPKDLAFGCGHMTCRDCGASISACPLCRQPITTRLRLFT 351


>ref|XP_002266834.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1 isoform 1 [Vitis
            vinifera] gi|359477063|ref|XP_003631931.1| PREDICTED: E3
            ubiquitin-protein ligase RGLG1 isoform 3 [Vitis vinifera]
          Length = 393

 Score =  582 bits (1499), Expect = e-163
 Identities = 291/393 (74%), Positives = 334/393 (84%), Gaps = 5/393 (1%)
 Frame = -1

Query: 1298 MGNNESTYDDTRDVFPYQPP-YAGSSMDPHSRSKQKTTHIADNYDSVKQVVSALREAGLE 1122
            MGN+ES +DD    F +Q P YAG+SMDP  R + +  +IADN++S+ QV  ALRE+GLE
Sbjct: 1    MGNSESAFDDPHHDFLHQTPSYAGTSMDPDYRHRGQLPYIADNFNSLDQVTDALRESGLE 60

Query: 1121 SSNLILGIDFTKSNEWTGKYSFSRKSLHAIGSTPNPYEQAINIIGRTLTPFDEDNLIPCF 942
            SSNLILGIDFTKSNEWTG++SF RKSLHAI +TPNPYEQAI+IIGRTL+PFDEDNLIPCF
Sbjct: 61   SSNLILGIDFTKSNEWTGRHSFHRKSLHAISNTPNPYEQAISIIGRTLSPFDEDNLIPCF 120

Query: 941  GFGDASTHDRCVFSFYPDNRPCHGFEEALARYREILPYLNLSGPTSFAPIIDAAIDIVER 762
            GFGDASTHD+ VFSFYPD+R C GFEE LARY+EI+PYL LSGPTSFAPIIDAAIDIVE 
Sbjct: 121  GFGDASTHDKYVFSFYPDHRYCRGFEEVLARYKEIVPYLKLSGPTSFAPIIDAAIDIVEG 180

Query: 761  SNGQYHVLVIIADGQVTRSPDTPPGRFSPQEQATVNSIVAASEYPLSIILVGVGDGPWDA 582
            SNGQYHVLVIIADGQV+ S D   GRFSPQEQATVNSIVAAS YPLSIILVGVGDGPWDA
Sbjct: 181  SNGQYHVLVIIADGQVSGSLDGSSGRFSPQEQATVNSIVAASRYPLSIILVGVGDGPWDA 240

Query: 581  MQEFDDNIPQRAFDNFQFVNFTKIMSEHTHMSKKEAAFSLAALMEIPLQYRATQSHQYIE 402
            M+ FDDNIPQR+FDNFQFV+F+KIMSE+   SKKE AF+L+ALMEIP QYRAT   Q I+
Sbjct: 241  MKLFDDNIPQRSFDNFQFVDFSKIMSENMEASKKETAFALSALMEIPFQYRATLRLQSID 300

Query: 401  K--LGGQRTNPLPPPREVIDHD-NAVKSVPRMT-SVDSNETMAPVEQVCPICLTNPKDMA 234
               +GG RT PLPPP+EV+DHD  A++ +   T SV++ E  APV+QVCPICLTNPK+MA
Sbjct: 301  NNLVGGPRTRPLPPPQEVLDHDREALQHMMATTLSVEAVEQTAPVDQVCPICLTNPKNMA 360

Query: 233  FGCGHLTCKECGVTLLLCPLCREPIRTRLRLFS 135
            FGCGHLTCKECG ++ LCPLCREPI TRL+L+S
Sbjct: 361  FGCGHLTCKECGESISLCPLCREPINTRLKLYS 393


>ref|XP_002309925.1| predicted protein [Populus trichocarpa] gi|118486339|gb|ABK95010.1|
            unknown [Populus trichocarpa] gi|222852828|gb|EEE90375.1|
            predicted protein [Populus trichocarpa]
          Length = 364

 Score =  581 bits (1498), Expect = e-163
 Identities = 282/365 (77%), Positives = 324/365 (88%), Gaps = 2/365 (0%)
 Frame = -1

Query: 1223 MDPHSRSKQKTTHIADNYDSVKQVVSALREAGLESSNLILGIDFTKSNEWTGKYSFSRKS 1044
            MD + + +Q  T+IADN++S+ QV+SALREAGLESSNLILGIDFTKSNEWTG++SF RKS
Sbjct: 1    MDHNYQRRQHPTYIADNFNSLDQVISALREAGLESSNLILGIDFTKSNEWTGRHSFHRKS 60

Query: 1043 LHAIGSTPNPYEQAINIIGRTLTPFDEDNLIPCFGFGDASTHDRCVFSFYPDNRPCHGFE 864
            LHAIGST NPYEQAI+IIGRTL+PFDEDNLIPCFGFGDASTHD+ VFSFYPDNRPC+  E
Sbjct: 61   LHAIGSTLNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTHDKYVFSFYPDNRPCNDLE 120

Query: 863  EALARYREILPYLNLSGPTSFAPIIDAAIDIVERSNGQYHVLVIIADGQVTRSPDTPPGR 684
            EALARYREI+P+L LSGPTSFA II+AAIDIVE+S GQYHVLVIIADGQVTR+PDTPPGR
Sbjct: 121  EALARYREIVPHLKLSGPTSFAAIINAAIDIVEKS-GQYHVLVIIADGQVTRTPDTPPGR 179

Query: 683  FSPQEQATVNSIVAASEYPLSIILVGVGDGPWDAMQEFDDNIPQRAFDNFQFVNFTKIMS 504
             SPQEQATVNSIVAAS++PLSII VGVGDGPW+AMQ+FDDNIPQR FDNFQFVNFTKIM 
Sbjct: 180  LSPQEQATVNSIVAASKHPLSIIFVGVGDGPWNAMQQFDDNIPQREFDNFQFVNFTKIML 239

Query: 503  EHTHMSKKEAAFSLAALMEIPLQYRATQSHQYIEK--LGGQRTNPLPPPREVIDHDNAVK 330
            ++T  SKKE AF+LAALMEIPLQYRATQ  Q+ +   +GG RT PLPPPREVIDHDNAVK
Sbjct: 240  DNTEASKKETAFALAALMEIPLQYRATQRLQHTDHDLVGGPRTRPLPPPREVIDHDNAVK 299

Query: 329  SVPRMTSVDSNETMAPVEQVCPICLTNPKDMAFGCGHLTCKECGVTLLLCPLCREPIRTR 150
            S+P +T+ ++ +    VE VCPICLTNPKDMAFGCGHLTC++CG +L  CP+CR+PI TR
Sbjct: 300  SIPHITNFETVQPSTSVEPVCPICLTNPKDMAFGCGHLTCRDCGASLSTCPICRQPITTR 359

Query: 149  LRLFS 135
            L+LF+
Sbjct: 360  LKLFT 364


>ref|XP_002516315.1| copine, putative [Ricinus communis] gi|223544545|gb|EEF46062.1|
            copine, putative [Ricinus communis]
          Length = 378

 Score =  572 bits (1475), Expect = e-161
 Identities = 287/369 (77%), Positives = 315/369 (85%), Gaps = 8/369 (2%)
 Frame = -1

Query: 1298 MGNNESTYDDTRD-VFPYQPPYAGSSMDPHSRSKQKTTHIADNYDSVKQVVSALREAGLE 1122
            MGN EST+D   D V       AGSSMD   R +Q+T +IADN++S+ QV+SALR+AGLE
Sbjct: 1    MGNGESTFDYPHDDVSQQHTSCAGSSMDHQFRHRQQTAYIADNFNSLDQVISALRDAGLE 60

Query: 1121 SSNLILGIDFTKSNEWTGKYSFSRKSLHAIGSTPNPYEQAINIIGRTLTPFDEDNLIPCF 942
            SSNLILGIDFTKSNEWTG++SF RKSLHAIG+  NPYEQAI+IIGRTL+PFDEDNLIPCF
Sbjct: 61   SSNLILGIDFTKSNEWTGRHSFHRKSLHAIGNNLNPYEQAISIIGRTLSPFDEDNLIPCF 120

Query: 941  GFGDASTHDRCVFSFYPDNRPCHGFEEALARYREILPYLNLSGPTSFAPIIDAAIDIVER 762
            GFGDASTHDR VFSFYPD RPC+GFEEAL RYREI+PYL LSGPTSFAPIIDAAI+IVE 
Sbjct: 121  GFGDASTHDRYVFSFYPDQRPCNGFEEALTRYREIVPYLKLSGPTSFAPIIDAAIEIVEN 180

Query: 761  SNGQYHVLVIIADGQVTRSPDTPPGRFSPQEQATVNSIVAASEYPLSIILVGVGDGPWDA 582
            SNGQYHVLVIIADGQVTRSPD PPG +SPQEQATVNSIVAAS+YPLSIILVGVGDGPWDA
Sbjct: 181  SNGQYHVLVIIADGQVTRSPDIPPGSYSPQEQATVNSIVAASQYPLSIILVGVGDGPWDA 240

Query: 581  MQEFDDNIPQRAFDNFQFVNFTKIMSEHTHMSKKEAAFSLAALMEIPLQYRATQS-HQYI 405
            M++FDDNIPQRAFDNFQFVNFTKIMSE+T  SKKE AF+LAALMEIP QYRATQ  H  I
Sbjct: 241  MKQFDDNIPQRAFDNFQFVNFTKIMSENTDTSKKETAFALAALMEIPFQYRATQRLHHVI 300

Query: 404  EKLGG------QRTNPLPPPREVIDHDNAVKSVPRMTSVDSNETMAPVEQVCPICLTNPK 243
            E  GG       RT PLPPPREVIDHDNAVKS+P M +  + E+  PVE VCPICLTNPK
Sbjct: 301  ESGGGPHIRPHPRTRPLPPPREVIDHDNAVKSIPIMKNFGAVESTTPVEPVCPICLTNPK 360

Query: 242  DMAFGCGHL 216
            DMAFGCGH+
Sbjct: 361  DMAFGCGHM 369


>ref|XP_003525130.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Glycine max]
          Length = 426

 Score =  565 bits (1457), Expect = e-159
 Identities = 288/426 (67%), Positives = 329/426 (77%), Gaps = 38/426 (8%)
 Frame = -1

Query: 1298 MGNNESTYDDTRDVFP----------------YQPP------------------YAGSSM 1221
            MGN EST+D   D F                 +QPP                  YAGSS+
Sbjct: 1    MGNEESTHDSHDDFFRQPRSHDGSSPNTSHQYHQPPSYDGSSANTSHQYHQPSSYAGSSV 60

Query: 1220 DPHSRSKQKTTHIADNYDSVKQVVSALREAGLESSNLILGIDFTKSNEWTGKYSFSRKSL 1041
            +   + KQ+ T+IAD++ S+ QVVSALREAGLESSNLI+GIDFTKSNEWTGK+SF+ KSL
Sbjct: 61   NTRHQYKQRPTYIADSFSSLDQVVSALREAGLESSNLIIGIDFTKSNEWTGKHSFNHKSL 120

Query: 1040 HAIGSTPNPYEQAINIIGRTLTPFDEDNLIPCFGFGDASTHDRCVFSFYPDNRPCHGFEE 861
            H  G+TPNPYEQAI+IIGRTL+ FDEDNLIPCFGFGDASTHD+ VFSFYPD   CHGFE+
Sbjct: 121  HFTGNTPNPYEQAISIIGRTLSSFDEDNLIPCFGFGDASTHDQNVFSFYPDECYCHGFEQ 180

Query: 860  ALARYREILPYLNLSGPTSFAPIIDAAIDIVERSNGQYHVLVIIADGQVTRSPDTPPGRF 681
             LARYREI+P+L L+GPTSFAP+IDAA+ IVERSNGQYHVLVIIADGQVTR+ DTP G+F
Sbjct: 181  VLARYREIVPHLKLAGPTSFAPVIDAAVGIVERSNGQYHVLVIIADGQVTRNSDTPHGKF 240

Query: 680  SPQEQATVNSIVAASEYPLSIILVGVGDGPWDAMQEFDDNIPQRAFDNFQFVNFTKIMSE 501
            SPQEQAT+NSI+AAS YPLSIILVGVGDGPWD MQ FDDNI QR FDNFQFVNFTKI SE
Sbjct: 241  SPQEQATINSIIAASHYPLSIILVGVGDGPWDEMQHFDDNITQRLFDNFQFVNFTKITSE 300

Query: 500  HTHMSKKEAAFSLAALMEIPLQYRATQSHQYIEK--LGGQRTNPLPPPREVIDHDNAVKS 327
            +   SKKEAAF+LAALMEIP+QYR TQ+ Q   +     QR  PLPPP+EVID DNAV +
Sbjct: 301  NKDASKKEAAFALAALMEIPIQYRITQNLQIANENPTSHQRKRPLPPPKEVIDRDNAVLA 360

Query: 326  VPRMTSVDSNETMAP--VEQVCPICLTNPKDMAFGCGHLTCKECGVTLLLCPLCREPIRT 153
            VP + + +S E  AP  VE VCPICLTNPKDMAFGCGH TCKECGVTL  CP+CR+ I T
Sbjct: 361  VPHVPNFESVEPSAPAAVESVCPICLTNPKDMAFGCGHTTCKECGVTLSSCPMCRQEITT 420

Query: 152  RLRLFS 135
            RLRL++
Sbjct: 421  RLRLYT 426


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