BLASTX nr result

ID: Panax21_contig00018814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018814
         (1768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17600.3| unnamed protein product [Vitis vinifera]              637   e-180
ref|XP_002276037.1| PREDICTED: peptide chain release factor 2 [V...   637   e-180
ref|XP_002514811.1| peptide chain release factor, putative [Rici...   614   e-173
ref|XP_003534498.1| PREDICTED: peptide chain release factor 2-li...   613   e-173
emb|CAG25777.1| putative translation releasing factor 2 [Cucumis...   610   e-172

>emb|CBI17600.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  637 bits (1643), Expect = e-180
 Identities = 326/406 (80%), Positives = 355/406 (87%), Gaps = 5/406 (1%)
 Frame = -3

Query: 1457 SIPARFPSLYLFAXXXXXXXXXXXE-----WAMQGFYTLRKDVESTSQRVEVIRASAGLQ 1293
            S P+RF    LFA                 WAMQ FYTLR+DVE+ S+R E IRASAGLQ
Sbjct: 43   SAPSRFSPHVLFASPESQLDMEVTTETSSEWAMQDFYTLRRDVEAISERAEEIRASAGLQ 102

Query: 1292 QXXXXXXXXXXXXXXXXLWDDRTKAQQTLVALTDVKDKLKLLNEFRSQVEDAETIVKLTE 1113
            Q                 WDDR KAQ+TL+ALTDVKDK+KLL +F++QVEDAETIVKLTE
Sbjct: 103  QLEEELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDFKTQVEDAETIVKLTE 162

Query: 1112 EMDSTDTAFLEEAANIIKELNMALDRFELTQLLAGPYDKEGAVISITAGAGGTDAQDWAD 933
            EMDS DT  LEEAANIIKELN ALDRFELTQLL+GPYDKEGAVISITAGAGGTDAQDWAD
Sbjct: 163  EMDSIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWAD 222

Query: 932  MLLRMYVRWGEKQQYKTRVVEKSMGEEAGIKSATIELEGRYAYGYMSGEKGTHRIVRQSP 753
            MLLRMYVRWGEKQ+YKTRVVEKSMGEEAGIKSATIELEGRYAYGY+SGEKGTHRIVRQSP
Sbjct: 223  MLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQSP 282

Query: 752  FNSKGLRQTSFSGVEVMPLLPEESLDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRITH 573
            FN+KGLRQTSFSGVEVMPLLPEES+DVEIPEEDLEISF+RAGGKGGQNVNKVETAVRITH
Sbjct: 283  FNAKGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 342

Query: 572  IPTGVSLRCTEERSQLANKIRALSRLKAKLLVIAEEQRASEIKQIRGDVVKADWGQQIRN 393
            IPTGV++RCTEERSQLANKI+ALSRLKAKLLVIAEEQRASEIKQIRGD VKA+WGQQIRN
Sbjct: 343  IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 402

Query: 392  YVFHPYKLVKDVRTGHETTDITSVMDGELDPFIKSYLRYKYSTSIS 255
            YVFHPYKLVKDVRTG+ET+DITSVMDGEL+PFIK+YL++K+S ++S
Sbjct: 403  YVFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFKFSMTLS 448


>ref|XP_002276037.1| PREDICTED: peptide chain release factor 2 [Vitis vinifera]
          Length = 454

 Score =  637 bits (1643), Expect = e-180
 Identities = 326/406 (80%), Positives = 355/406 (87%), Gaps = 5/406 (1%)
 Frame = -3

Query: 1457 SIPARFPSLYLFAXXXXXXXXXXXE-----WAMQGFYTLRKDVESTSQRVEVIRASAGLQ 1293
            S P+RF    LFA                 WAMQ FYTLR+DVE+ S+R E IRASAGLQ
Sbjct: 46   SAPSRFSPHVLFASPESQLDMEVTTETSSEWAMQDFYTLRRDVEAISERAEEIRASAGLQ 105

Query: 1292 QXXXXXXXXXXXXXXXXLWDDRTKAQQTLVALTDVKDKLKLLNEFRSQVEDAETIVKLTE 1113
            Q                 WDDR KAQ+TL+ALTDVKDK+KLL +F++QVEDAETIVKLTE
Sbjct: 106  QLEEELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDFKTQVEDAETIVKLTE 165

Query: 1112 EMDSTDTAFLEEAANIIKELNMALDRFELTQLLAGPYDKEGAVISITAGAGGTDAQDWAD 933
            EMDS DT  LEEAANIIKELN ALDRFELTQLL+GPYDKEGAVISITAGAGGTDAQDWAD
Sbjct: 166  EMDSIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWAD 225

Query: 932  MLLRMYVRWGEKQQYKTRVVEKSMGEEAGIKSATIELEGRYAYGYMSGEKGTHRIVRQSP 753
            MLLRMYVRWGEKQ+YKTRVVEKSMGEEAGIKSATIELEGRYAYGY+SGEKGTHRIVRQSP
Sbjct: 226  MLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQSP 285

Query: 752  FNSKGLRQTSFSGVEVMPLLPEESLDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRITH 573
            FN+KGLRQTSFSGVEVMPLLPEES+DVEIPEEDLEISF+RAGGKGGQNVNKVETAVRITH
Sbjct: 286  FNAKGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 345

Query: 572  IPTGVSLRCTEERSQLANKIRALSRLKAKLLVIAEEQRASEIKQIRGDVVKADWGQQIRN 393
            IPTGV++RCTEERSQLANKI+ALSRLKAKLLVIAEEQRASEIKQIRGD VKA+WGQQIRN
Sbjct: 346  IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 405

Query: 392  YVFHPYKLVKDVRTGHETTDITSVMDGELDPFIKSYLRYKYSTSIS 255
            YVFHPYKLVKDVRTG+ET+DITSVMDGEL+PFIK+YL++K+S ++S
Sbjct: 406  YVFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFKFSMTLS 451


>ref|XP_002514811.1| peptide chain release factor, putative [Ricinus communis]
            gi|223545862|gb|EEF47365.1| peptide chain release factor,
            putative [Ricinus communis]
          Length = 458

 Score =  614 bits (1584), Expect = e-173
 Identities = 306/377 (81%), Positives = 342/377 (90%)
 Frame = -3

Query: 1382 WAMQGFYTLRKDVESTSQRVEVIRASAGLQQXXXXXXXXXXXXXXXXLWDDRTKAQQTLV 1203
            WAMQ FY+LR+DVE+ S+RVE IR SAGLQQ                 WDDR  AQ+TL+
Sbjct: 81   WAMQDFYSLRRDVEAASERVEEIRTSAGLQQLEQEVTNLESKAANTSFWDDRATAQETLL 140

Query: 1202 ALTDVKDKLKLLNEFRSQVEDAETIVKLTEEMDSTDTAFLEEAANIIKELNMALDRFELT 1023
            ALTDVKDK+KLL EF+++VEDAETIVKLTEEMDS DT  LEEA++IIKELN +L+RFELT
Sbjct: 141  ALTDVKDKIKLLTEFKTKVEDAETIVKLTEEMDSIDTGLLEEASSIIKELNKSLERFELT 200

Query: 1022 QLLAGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQQYKTRVVEKSMGEEAGI 843
            QLL+GPYDKE AVISITAGAGGTDAQDWADMLLRMYVRWGEKQ+YKTRVVEKS GEEAGI
Sbjct: 201  QLLSGPYDKESAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGI 260

Query: 842  KSATIELEGRYAYGYMSGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEESLDVEIP 663
            KSA IE+EGRYAYGY+SGEKGTHRIVRQSPFN+KGLRQTSFSG+EVMPLLPEES+DVE+P
Sbjct: 261  KSAMIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGIEVMPLLPEESMDVELP 320

Query: 662  EEDLEISFTRAGGKGGQNVNKVETAVRITHIPTGVSLRCTEERSQLANKIRALSRLKAKL 483
            EEDLEISF+RAGGKGGQNVNKVETAVRITHIPTGV++RCTEERSQLANKI+ALSRLKAKL
Sbjct: 321  EEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKL 380

Query: 482  LVIAEEQRASEIKQIRGDVVKADWGQQIRNYVFHPYKLVKDVRTGHETTDITSVMDGELD 303
            LVIA EQRASEIKQIRGD VKA+WGQQIRNYVFHPYKLVKDVRTG+ET+D+TSVMDGEL+
Sbjct: 381  LVIAVEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDVTSVMDGELE 440

Query: 302  PFIKSYLRYKYSTSISN 252
             FIK+YL+YKYS ++S+
Sbjct: 441  AFIKAYLKYKYSMTLSS 457


>ref|XP_003534498.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
          Length = 456

 Score =  613 bits (1580), Expect = e-173
 Identities = 307/376 (81%), Positives = 338/376 (89%)
 Frame = -3

Query: 1382 WAMQGFYTLRKDVESTSQRVEVIRASAGLQQXXXXXXXXXXXXXXXXLWDDRTKAQQTLV 1203
            WA+Q FY+LRKDVE  SQRV  IR S+GLQ                  WD+R KAQ+TL 
Sbjct: 76   WALQDFYSLRKDVEIMSQRVGEIRESSGLQLLEQELGNLEEQAADSSFWDNRGKAQETLS 135

Query: 1202 ALTDVKDKLKLLNEFRSQVEDAETIVKLTEEMDSTDTAFLEEAANIIKELNMALDRFELT 1023
             L DVKDK+KLLN+F++QVEDAETIV LTEEMDS D    EEA+N+IKELN ++DR+ELT
Sbjct: 136  TLADVKDKIKLLNDFKTQVEDAETIVSLTEEMDSIDRGLFEEASNLIKELNKSIDRYELT 195

Query: 1022 QLLAGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQQYKTRVVEKSMGEEAGI 843
            QLL+GPYDKEGAVISITAGAGGTDAQDWADMLLRMY+RWGEKQ+YKTRVVEKS GEEAGI
Sbjct: 196  QLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYMRWGEKQKYKTRVVEKSPGEEAGI 255

Query: 842  KSATIELEGRYAYGYMSGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEESLDVEIP 663
            KSATIE+EGRYAYGY+SGEKGTHRIVRQSPFN+KGLRQTSFSGVEVMPLLP+ES++VEIP
Sbjct: 256  KSATIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPDESMNVEIP 315

Query: 662  EEDLEISFTRAGGKGGQNVNKVETAVRITHIPTGVSLRCTEERSQLANKIRALSRLKAKL 483
            EEDLEISF+RAGGKGGQNVNKVETAVRITHIPTGV++RCTEERSQLANKIRALSRLKAKL
Sbjct: 316  EEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIRALSRLKAKL 375

Query: 482  LVIAEEQRASEIKQIRGDVVKADWGQQIRNYVFHPYKLVKDVRTGHETTDITSVMDGELD 303
            LVIAEEQRASEIKQIRGD VKA+WGQQIRNYVFHPYKLVKDVRTGHETTDITSVMDGELD
Sbjct: 376  LVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETTDITSVMDGELD 435

Query: 302  PFIKSYLRYKYSTSIS 255
            PFIKSYL++KY+ S+S
Sbjct: 436  PFIKSYLKHKYNMSLS 451


>emb|CAG25777.1| putative translation releasing factor 2 [Cucumis sativus]
          Length = 453

 Score =  610 bits (1573), Expect = e-172
 Identities = 303/376 (80%), Positives = 341/376 (90%)
 Frame = -3

Query: 1382 WAMQGFYTLRKDVESTSQRVEVIRASAGLQQXXXXXXXXXXXXXXXXLWDDRTKAQQTLV 1203
            WA Q FYTLRK+VE+TS+RVE IR SAGL Q                 WDDR+KAQ+ L+
Sbjct: 75   WATQDFYTLRKEVETTSERVEEIRNSAGLLQLDQELADLESKAADNSFWDDRSKAQKVLM 134

Query: 1202 ALTDVKDKLKLLNEFRSQVEDAETIVKLTEEMDSTDTAFLEEAANIIKELNMALDRFELT 1023
            A+TDVKDK+K+L +F++QVE+AETIVKLTEEMDS D   LEEA  IIK+LN ALD+FEL+
Sbjct: 135  AMTDVKDKIKMLTDFKTQVEEAETIVKLTEEMDSVDVGLLEEATKIIKDLNKALDQFELS 194

Query: 1022 QLLAGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQQYKTRVVEKSMGEEAGI 843
            +LL+GPYDKEGAVISI+AGAGGTDAQDWADMLLRMYVRWGEKQ+YKTRVVEKS GEEAGI
Sbjct: 195  ELLSGPYDKEGAVISISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSAGEEAGI 254

Query: 842  KSATIELEGRYAYGYMSGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEESLDVEIP 663
            KSATIE+EGRYAYGY+SGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLP+ES++VE+P
Sbjct: 255  KSATIEIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPDESMNVELP 314

Query: 662  EEDLEISFTRAGGKGGQNVNKVETAVRITHIPTGVSLRCTEERSQLANKIRALSRLKAKL 483
            EEDLEISF+RAGGKGGQNVNKVETAVRITHIPTGV++RCTEERSQLANKI+ALSRLKAKL
Sbjct: 315  EEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKL 374

Query: 482  LVIAEEQRASEIKQIRGDVVKADWGQQIRNYVFHPYKLVKDVRTGHETTDITSVMDGELD 303
            LVIAEEQRASEIKQIRGD VKA+WGQQIRNYVFHPYKLVKDVRTG+ET+DI SVMDGEL+
Sbjct: 375  LVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDIVSVMDGELE 434

Query: 302  PFIKSYLRYKYSTSIS 255
            PFIK+YL+YKYS ++S
Sbjct: 435  PFIKAYLKYKYSIALS 450


Top