BLASTX nr result

ID: Panax21_contig00018804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018804
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF66982.1| transposase [Zea mays]                                 105   4e-39
ref|XP_003561190.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   103   1e-38
ref|XP_003572690.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   103   7e-38
gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]      99   2e-37
ref|XP_003579255.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    97   3e-37

>gb|AAF66982.1| transposase [Zea mays]
          Length = 709

 Score =  105 bits (262), Expect(2) = 4e-39
 Identities = 47/105 (44%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
 Frame = -2

Query: 785 MPGSPPKMIITDQDPVMRNSIHAMLPNTFHRYCIWHILKKFSEKLG-PIPY-KEHYGELS 612
           M G  P++IITD+D  ++++I   LP+T HR C+WHI++K SEK+G P  + KE +  L+
Sbjct: 299 MGGKAPRLIITDEDASIKSAIRTTLPDTIHRLCMWHIMEKVSEKVGHPTSHDKEFWDALN 358

Query: 611 CCIWKSESPDEFERRWAEVVGKATFDTNDWLQEMYEIRER*VPAF 477
            C+W SE+P+EFE RW  ++     ++N+WL   Y+IRE  +PAF
Sbjct: 359 TCVWGSETPEEFEMRWNALMDAYGLESNEWLANRYKIRESWIPAF 403



 Score = 82.8 bits (203), Expect(2) = 4e-39
 Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 9/142 (6%)
 Frame = -3

Query: 454 MTSSQRVEGAHAFFKKYVSPQNSMLDFVTRFNRGLAKMRHNELDFDHKDVNEKPQTVTGR 275
           + ++ R E A++FF +++  +   ++F  RF+  L + RH EL  DH  ++  P   T  
Sbjct: 413 LRTTSRSESANSFFNRFIHRKLCFVEFWLRFDTALERQRHEELKADHISIHSTPVLRTPW 472

Query: 274 VMEYQMSELYTHTIFYKFQEQLLESGKY--VITRTFKD-------DNNCMYDRKLSFDKS 122
           V+E Q S LYTH +F  FQE+++ +  +  V+  T +D        +  M DR + +  S
Sbjct: 473 VVEKQASILYTHKVFKIFQEEVIAARDHCSVLGTTQQDAVKFVVVSDGSMRDRVVQWCTS 532

Query: 121 SNFVKCSCQMFESDRIPCRHML 56
           + F +CSC++FE   IPC H++
Sbjct: 533 NIFGRCSCKLFEKIGIPCCHII 554


>ref|XP_003561190.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Brachypodium
           distachyon]
          Length = 944

 Score =  103 bits (258), Expect(2) = 1e-38
 Identities = 44/111 (39%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
 Frame = -2

Query: 785 MPGSPPKMIITDQDPVMRNSIHAMLPNTFHRYCIWHILKKFSEKLGPIPYKE---HYGEL 615
           M G+ P++I+TD+D  M+ +I  ++ NT HR C+WHI++K  EK+GP P +E    Y  +
Sbjct: 390 MDGAAPRLIVTDEDQSMKIAIEDVMHNTVHRLCMWHIMRKLPEKVGP-PLREDEHFYSTI 448

Query: 614 SCCIWKSESPDEFERRWAEVVGKATFDTNDWLQEMYEIRER*VPAFSRHFF 462
           + C+W SE+P EFE +W+ ++ +   + N W    YE+RE  +PA+ R  F
Sbjct: 449 NSCVWGSENPTEFEAKWSSMISEFGLEDNTWFSRRYELRESWIPAYFRGVF 499



 Score = 82.8 bits (203), Expect(2) = 1e-38
 Identities = 41/153 (26%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
 Frame = -3

Query: 481 HFRDIFSAH-MTSSQRVEGAHAFFKKYVSPQNSMLDFVTRFNRGLAKMRHNELDFDHKDV 305
           +FR +F    + ++ R E A++FF  ++  ++++++F  R    L + R NEL  DH+ +
Sbjct: 494 YFRGVFLGEILRTTSRSESANSFFNHFIGYKHALVEFWIRIGTALEEQRQNELKADHECL 553

Query: 304 NEKPQTVTGRVMEYQMSELYTHTIFYKFQEQLLESGKYVITRTFKDDNN----------C 155
           N  P  +T   +E   S  +TH  F  FQ+++  S  + +      + +           
Sbjct: 554 NSMPPLITSWEIEKHASLFFTHAFFSSFQKEVRASRDHCLIENISQEGDVRTTIIGGARS 613

Query: 154 MYDRKLSFDKSSNFVKCSCQMFESDRIPCRHML 56
              R++ F+ +S   +CSC +FE+  IPCRH++
Sbjct: 614 FKSREVQFNTTSKSARCSCMLFETRGIPCRHII 646


>ref|XP_003572690.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Brachypodium
           distachyon]
          Length = 868

 Score =  103 bits (256), Expect(2) = 7e-38
 Identities = 44/111 (39%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
 Frame = -2

Query: 785 MPGSPPKMIITDQDPVMRNSIHAMLPNTFHRYCIWHILKKFSEKLGPIPYKE---HYGEL 615
           M G+ P++I+TD+D  M+ +I  ++ NT HR C+WHI++K  EK+GP P +E    Y  +
Sbjct: 435 MDGAAPRLIVTDEDQSMKIAIEDVMHNTVHRLCMWHIMRKLPEKVGP-PLREDEHFYSTI 493

Query: 614 SCCIWKSESPDEFERRWAEVVGKATFDTNDWLQEMYEIRER*VPAFSRHFF 462
           + C+W SE+P EFE +W+ ++ +   + N W    YE+RE  +PA+ R  F
Sbjct: 494 NSCVWGSENPIEFEAKWSSMISEFGLEDNTWFSRRYELRESWIPAYFRGVF 544



 Score = 80.9 bits (198), Expect(2) = 7e-38
 Identities = 41/153 (26%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
 Frame = -3

Query: 481 HFRDIFSAH-MTSSQRVEGAHAFFKKYVSPQNSMLDFVTRFNRGLAKMRHNELDFDHKDV 305
           +FR +F    + ++ R E A++FF  ++  ++++++F  R    L + R NEL  DH+ +
Sbjct: 539 YFRGVFLGEILRTTSRSESANSFFNHFIGYKHALVEFWIRIGMALEEQRQNELKADHECL 598

Query: 304 NEKPQTVTGRVMEYQMSELYTHTIFYKFQEQLLESGKYVITRTFKDDNN----------C 155
           N  P  +T   +E   S  +TH +F  FQ++L  S  + +      + +           
Sbjct: 599 NSMPPLITSWEIEKHASLFFTHAVFSSFQKELRASRDHCLIENISQEGDVRTTIIGGARS 658

Query: 154 MYDRKLSFDKSSNFVKCSCQMFESDRIPCRHML 56
              R++ F+ +S   + SC +FE+  IPCRH++
Sbjct: 659 FKSREVQFNTTSKSARFSCMLFETRGIPCRHII 691


>gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 800

 Score = 98.6 bits (244), Expect(2) = 2e-37
 Identities = 47/111 (42%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
 Frame = -2

Query: 785 MPGSPPKMIITDQDPVMRNSIHAMLPNTFHRYCIWHILKKFSEKLGPIPYKEHYG---EL 615
           M G  P MIITDQD  M+N+I A+L  + HR+C+WHILKK SEK+G     E+ G     
Sbjct: 378 MGGHKPVMIITDQDGGMKNAIGAVLKGSSHRFCMWHILKKLSEKVGS-SMDENSGFNDRF 436

Query: 614 SCCIWKSESPDEFERRWAEVVGKATFDTNDWLQEMYEIRER*VPAFSRHFF 462
             C+W SES +EF+  W  ++   + + N WL  MY++R   +PA+ +  F
Sbjct: 437 KSCVWNSESSEEFDLEWNNIISDYSLEGNGWLSTMYDLRSMWIPAYFKDTF 487



 Score = 83.6 bits (205), Expect(2) = 2e-37
 Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
 Frame = -3

Query: 481 HFRDIFSAH-MTSSQRVEGAHAFFKKYVSPQNSMLDFVTRFNRGLAKMRHNELDFDHKDV 305
           +F+D F A  + ++ R E  ++FF  Y++   ++++F  RF+  LA  RH EL  D+  +
Sbjct: 482 YFKDTFMAGILRTTSRSESENSFFGNYLNHNLTLVEFWVRFDSALAAQRHKELFADNNTL 541

Query: 304 NEKPQTVTGRVMEYQMSELYTHTIFYKFQEQL------------LESGKYVITRTFKDDN 161
           +  P+      +E    E+YTH  FY FQ++L             E G+ +       DN
Sbjct: 542 HSNPELNMHMNLEKHAREVYTHENFYIFQKELWSACVDCGIEGTKEEGENLSFSIL--DN 599

Query: 160 NCMYDRKLSFDKSSNFVKCSCQMFESDRIPCRHML 56
                R++ +  S+N   CSC+MFES+ IPCRH+L
Sbjct: 600 AVRKHREVVYCLSNNIAHCSCKMFESEGIPCRHIL 634


>ref|XP_003579255.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Brachypodium
           distachyon]
          Length = 888

 Score = 97.4 bits (241), Expect(2) = 3e-37
 Identities = 41/111 (36%), Positives = 70/111 (63%), Gaps = 3/111 (2%)
 Frame = -2

Query: 785 MPGSPPKMIITDQDPVMRNSIHAMLPNTFHRYCIWHILKKFSEKLGPIPYKE---HYGEL 615
           M G+ P++I+T++D  M+ +I  ++ NT HR C+WHI++K  EK+GP P +E    Y  +
Sbjct: 435 MDGAAPRLIVTNEDQSMKIAIEDVMHNTVHRLCMWHIMRKLPEKVGP-PLREDEHFYSTI 493

Query: 614 SCCIWKSESPDEFERRWAEVVGKATFDTNDWLQEMYEIRER*VPAFSRHFF 462
           + C+W SE+  EFE +W+ ++ +   + N W  + YE+ E  +PA+ R  F
Sbjct: 494 NSCVWGSENSTEFEAKWSSMISEFGLEDNTWFSKRYELHESWIPAYFRGVF 544



 Score = 84.3 bits (207), Expect(2) = 3e-37
 Identities = 41/153 (26%), Positives = 80/153 (52%), Gaps = 11/153 (7%)
 Frame = -3

Query: 481 HFRDIFSAH-MTSSQRVEGAHAFFKKYVSPQNSMLDFVTRFNRGLAKMRHNELDFDHKDV 305
           +FR +F    + ++ R E A++FF  ++  ++++++F  R +  L + R NEL  DH+ +
Sbjct: 539 YFRGVFLGEILRTTSRSESANSFFNHFIGYKHALVEFWIRISTALEEQRQNELKADHECL 598

Query: 304 NEKPQTVTGRVMEYQMSELYTHTIFYKFQEQLLESGKYVITRTFKDDNN----------C 155
           N  P  +T   +E   S  +TH +F  FQ+++  S  + +      + +           
Sbjct: 599 NSMPPLITSWEIEKHASLFFTHAVFSSFQKEVRASRDHCLIENISQEGDVRTTIIGGARS 658

Query: 154 MYDRKLSFDKSSNFVKCSCQMFESDRIPCRHML 56
              R++ F+ +S   +CSC +FE+  IPCRH++
Sbjct: 659 FKSREVQFNTTSKSARCSCMLFETRGIPCRHII 691


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