BLASTX nr result

ID: Panax21_contig00018798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018798
         (1694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]      131   5e-28
ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|2...   118   5e-24
emb|CBI39572.3| unnamed protein product [Vitis vinifera]              115   5e-23
emb|CAN73069.1| hypothetical protein VITISV_005845 [Vitis vinifera]   115   5e-23
gb|AAF26076.1|AC012393_2 putative DNA helicase [Arabidopsis thal...   109   2e-21

>gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 617

 Score =  131 bits (330), Expect = 5e-28
 Identities = 63/88 (71%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
 Frame = +2

Query: 917  DCKSSITQDPVSLISSEATCFRTSMD-HGTLNYEELQSLDDIELANVVIFGNRCFRPLQH 1093
            DCKSS+TQ  VS + ++  C R S D H +LNYEELQ+LDD ELANVVIFGN+ FRPLQH
Sbjct: 162  DCKSSVTQGSVSSVGNKRQCPRMSKDDHRSLNYEELQALDDFELANVVIFGNKTFRPLQH 221

Query: 1094 QACTASLAKHDCFVLMPTGGGKSLCYQV 1177
            QAC A++AK DCFVLMPTGGGKSLCYQ+
Sbjct: 222  QACKATVAKQDCFVLMPTGGGKSLCYQL 249


>ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|222871645|gb|EEF08776.1|
            predicted protein [Populus trichocarpa]
          Length = 588

 Score =  118 bits (295), Expect = 5e-24
 Identities = 59/100 (59%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
 Frame = +2

Query: 881  KVKCNVRFDLLKDCKSSITQDPVSLISSEATCFRTSMD-HGTLNYEELQSLDDIELANVV 1057
            K +  +  D   D +       VS + ++  C R S D H +LNYEELQ+LDD ELANVV
Sbjct: 121  KTRTFMELDSSSDSEEEPDFSSVSSVGNKRQCPRMSKDDHRSLNYEELQALDDFELANVV 180

Query: 1058 IFGNRCFRPLQHQACTASLAKHDCFVLMPTGGGKSLCYQV 1177
            IFGN+ FRPLQHQAC A++AK DCFVLMPTGGGKSLCYQ+
Sbjct: 181  IFGNKTFRPLQHQACKATVAKQDCFVLMPTGGGKSLCYQL 220


>emb|CBI39572.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  115 bits (287), Expect = 5e-23
 Identities = 59/88 (67%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
 Frame = +2

Query: 917  DCKSSITQDPVSLISSEATCFRTSMD-HGTLNYEELQSLDDIELANVVIFGNRCFRPLQH 1093
            D K S+ Q  VS IS++    + S D +GTL+YE L  LDD ELANVVIFGNR FRPLQH
Sbjct: 119  DSKISVIQGSVSSISNKRARSQMSEDENGTLSYEALLDLDDFELANVVIFGNRTFRPLQH 178

Query: 1094 QACTASLAKHDCFVLMPTGGGKSLCYQV 1177
            QAC AS+ K DCFVLMPTGGGKSLCYQ+
Sbjct: 179  QACKASVTKRDCFVLMPTGGGKSLCYQL 206


>emb|CAN73069.1| hypothetical protein VITISV_005845 [Vitis vinifera]
          Length = 1640

 Score =  115 bits (287), Expect = 5e-23
 Identities = 59/88 (67%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
 Frame = +2

Query: 917  DCKSSITQDPVSLISSEATCFRTSMD-HGTLNYEELQSLDDIELANVVIFGNRCFRPLQH 1093
            D K S+ Q  VS IS++    + S D +GTL+YE L  LDD ELANVVIFGNR FRPLQH
Sbjct: 266  DSKISVIQGSVSSISNKRARSQMSEDENGTLSYEALLDLDDFELANVVIFGNRTFRPLQH 325

Query: 1094 QACTASLAKHDCFVLMPTGGGKSLCYQV 1177
            QAC AS+ K DCFVLMPTGGGKSLCYQ+
Sbjct: 326  QACKASVTKRDCFVLMPTGGGKSLCYQL 353


>gb|AAF26076.1|AC012393_2 putative DNA helicase [Arabidopsis thaliana]
          Length = 624

 Score =  109 bits (273), Expect = 2e-21
 Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
 Frame = +2

Query: 938  QDPVSLISSEATCFRTS-MDHGTLNYEELQSLDDIELANVVIFGNRCFRPLQHQACTASL 1114
            +D VS IS      + S  DH T +YEELQ+LDD+E AN+VIFGN+ FRPLQHQAC AS+
Sbjct: 178  EDSVSTISGRKPSVQISNKDHETPSYEELQALDDLEFANLVIFGNKVFRPLQHQACRASM 237

Query: 1115 AKHDCFVLMPTGGGKSLCYQV 1177
             + DCFVLMPTGGGKSLCYQ+
Sbjct: 238  ERKDCFVLMPTGGGKSLCYQL 258


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