BLASTX nr result
ID: Panax21_contig00018798
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00018798 (1694 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides] 131 5e-28 ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|2... 118 5e-24 emb|CBI39572.3| unnamed protein product [Vitis vinifera] 115 5e-23 emb|CAN73069.1| hypothetical protein VITISV_005845 [Vitis vinifera] 115 5e-23 gb|AAF26076.1|AC012393_2 putative DNA helicase [Arabidopsis thal... 109 2e-21 >gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides] Length = 617 Score = 131 bits (330), Expect = 5e-28 Identities = 63/88 (71%), Positives = 73/88 (82%), Gaps = 1/88 (1%) Frame = +2 Query: 917 DCKSSITQDPVSLISSEATCFRTSMD-HGTLNYEELQSLDDIELANVVIFGNRCFRPLQH 1093 DCKSS+TQ VS + ++ C R S D H +LNYEELQ+LDD ELANVVIFGN+ FRPLQH Sbjct: 162 DCKSSVTQGSVSSVGNKRQCPRMSKDDHRSLNYEELQALDDFELANVVIFGNKTFRPLQH 221 Query: 1094 QACTASLAKHDCFVLMPTGGGKSLCYQV 1177 QAC A++AK DCFVLMPTGGGKSLCYQ+ Sbjct: 222 QACKATVAKQDCFVLMPTGGGKSLCYQL 249 >ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|222871645|gb|EEF08776.1| predicted protein [Populus trichocarpa] Length = 588 Score = 118 bits (295), Expect = 5e-24 Identities = 59/100 (59%), Positives = 71/100 (71%), Gaps = 1/100 (1%) Frame = +2 Query: 881 KVKCNVRFDLLKDCKSSITQDPVSLISSEATCFRTSMD-HGTLNYEELQSLDDIELANVV 1057 K + + D D + VS + ++ C R S D H +LNYEELQ+LDD ELANVV Sbjct: 121 KTRTFMELDSSSDSEEEPDFSSVSSVGNKRQCPRMSKDDHRSLNYEELQALDDFELANVV 180 Query: 1058 IFGNRCFRPLQHQACTASLAKHDCFVLMPTGGGKSLCYQV 1177 IFGN+ FRPLQHQAC A++AK DCFVLMPTGGGKSLCYQ+ Sbjct: 181 IFGNKTFRPLQHQACKATVAKQDCFVLMPTGGGKSLCYQL 220 >emb|CBI39572.3| unnamed protein product [Vitis vinifera] Length = 591 Score = 115 bits (287), Expect = 5e-23 Identities = 59/88 (67%), Positives = 67/88 (76%), Gaps = 1/88 (1%) Frame = +2 Query: 917 DCKSSITQDPVSLISSEATCFRTSMD-HGTLNYEELQSLDDIELANVVIFGNRCFRPLQH 1093 D K S+ Q VS IS++ + S D +GTL+YE L LDD ELANVVIFGNR FRPLQH Sbjct: 119 DSKISVIQGSVSSISNKRARSQMSEDENGTLSYEALLDLDDFELANVVIFGNRTFRPLQH 178 Query: 1094 QACTASLAKHDCFVLMPTGGGKSLCYQV 1177 QAC AS+ K DCFVLMPTGGGKSLCYQ+ Sbjct: 179 QACKASVTKRDCFVLMPTGGGKSLCYQL 206 >emb|CAN73069.1| hypothetical protein VITISV_005845 [Vitis vinifera] Length = 1640 Score = 115 bits (287), Expect = 5e-23 Identities = 59/88 (67%), Positives = 67/88 (76%), Gaps = 1/88 (1%) Frame = +2 Query: 917 DCKSSITQDPVSLISSEATCFRTSMD-HGTLNYEELQSLDDIELANVVIFGNRCFRPLQH 1093 D K S+ Q VS IS++ + S D +GTL+YE L LDD ELANVVIFGNR FRPLQH Sbjct: 266 DSKISVIQGSVSSISNKRARSQMSEDENGTLSYEALLDLDDFELANVVIFGNRTFRPLQH 325 Query: 1094 QACTASLAKHDCFVLMPTGGGKSLCYQV 1177 QAC AS+ K DCFVLMPTGGGKSLCYQ+ Sbjct: 326 QACKASVTKRDCFVLMPTGGGKSLCYQL 353 >gb|AAF26076.1|AC012393_2 putative DNA helicase [Arabidopsis thaliana] Length = 624 Score = 109 bits (273), Expect = 2e-21 Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 1/81 (1%) Frame = +2 Query: 938 QDPVSLISSEATCFRTS-MDHGTLNYEELQSLDDIELANVVIFGNRCFRPLQHQACTASL 1114 +D VS IS + S DH T +YEELQ+LDD+E AN+VIFGN+ FRPLQHQAC AS+ Sbjct: 178 EDSVSTISGRKPSVQISNKDHETPSYEELQALDDLEFANLVIFGNKVFRPLQHQACRASM 237 Query: 1115 AKHDCFVLMPTGGGKSLCYQV 1177 + DCFVLMPTGGGKSLCYQ+ Sbjct: 238 ERKDCFVLMPTGGGKSLCYQL 258